risk-network 0.0.8b26__tar.gz → 0.0.8b27__tar.gz

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Files changed (44) hide show
  1. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/PKG-INFO +1 -1
  2. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/__init__.py +1 -1
  3. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/log/__init__.py +1 -1
  4. risk_network-0.0.8b26/risk/log/config.py → risk_network-0.0.8b27/risk/log/console.py +2 -2
  5. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/log/params.py +1 -1
  6. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/canvas.py +3 -1
  7. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk_network.egg-info/PKG-INFO +1 -1
  8. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk_network.egg-info/SOURCES.txt +1 -1
  9. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/LICENSE +0 -0
  10. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/MANIFEST.in +0 -0
  11. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/README.md +0 -0
  12. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/pyproject.toml +0 -0
  13. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/annotations/__init__.py +0 -0
  14. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/annotations/annotations.py +0 -0
  15. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/annotations/io.py +0 -0
  16. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/constants.py +0 -0
  17. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/neighborhoods/__init__.py +0 -0
  18. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/neighborhoods/community.py +0 -0
  19. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/neighborhoods/domains.py +0 -0
  20. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/neighborhoods/neighborhoods.py +0 -0
  21. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/__init__.py +0 -0
  22. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/geometry.py +0 -0
  23. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/graph.py +0 -0
  24. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/io.py +0 -0
  25. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/__init__.py +0 -0
  26. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/contour.py +0 -0
  27. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/labels.py +0 -0
  28. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/network.py +0 -0
  29. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/plotter.py +0 -0
  30. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/utils/color.py +0 -0
  31. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/network/plot/utils/layout.py +0 -0
  32. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/risk.py +0 -0
  33. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/stats/__init__.py +0 -0
  34. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/stats/hypergeom.py +0 -0
  35. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/stats/permutation/__init__.py +0 -0
  36. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/stats/permutation/permutation.py +0 -0
  37. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/stats/permutation/test_functions.py +0 -0
  38. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/stats/poisson.py +0 -0
  39. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk/stats/stats.py +0 -0
  40. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk_network.egg-info/dependency_links.txt +0 -0
  41. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk_network.egg-info/requires.txt +0 -0
  42. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/risk_network.egg-info/top_level.txt +0 -0
  43. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/setup.cfg +0 -0
  44. {risk_network-0.0.8b26 → risk_network-0.0.8b27}/setup.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: risk-network
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- Version: 0.0.8b26
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+ Version: 0.0.8b27
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  Summary: A Python package for biological network analysis
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  Author: Ira Horecka
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  Author-email: Ira Horecka <ira89@icloud.com>
@@ -7,4 +7,4 @@ RISK: RISK Infers Spatial Kinships
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  from risk.risk import RISK
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- __version__ = "0.0.8-beta.26"
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+ __version__ = "0.0.8-beta.27"
@@ -3,7 +3,7 @@ risk/log
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  ~~~~~~~~
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  """
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- from .config import logger, log_header, set_global_verbosity
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+ from .console import logger, log_header, set_global_verbosity
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  from .params import Params
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  params = Params()
@@ -1,6 +1,6 @@
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  """
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- risk/log/config
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- ~~~~~~~~~~~~~~~
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+ risk/log/console
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+ ~~~~~~~~~~~~~~~~
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  """
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  import logging
@@ -12,7 +12,7 @@ from typing import Any, Dict
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  import numpy as np
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- from .config import logger, log_header
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+ from .console import logger, log_header
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  # Suppress all warnings - this is to resolve warnings from multiprocessing
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  warnings.filterwarnings("ignore")
@@ -36,6 +36,7 @@ class Canvas:
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  font: str = "Arial",
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  title_color: Union[str, List, Tuple, np.ndarray] = "black",
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  subtitle_color: Union[str, List, Tuple, np.ndarray] = "gray",
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+ title_x: float = 0.5,
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  title_y: float = 0.975,
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  title_space_offset: float = 0.075,
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  subtitle_offset: float = 0.025,
@@ -52,6 +53,7 @@ class Canvas:
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  Defaults to "black".
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  subtitle_color (str, List, Tuple, or np.ndarray, optional): Color of the subtitle text. Can be a string or an array of colors.
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  Defaults to "gray".
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+ title_x (float, optional): X-axis position of the title. Defaults to 0.5.
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  title_y (float, optional): Y-axis position of the title. Defaults to 0.975.
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  title_space_offset (float, optional): Fraction of figure height to leave for the space above the plot. Defaults to 0.075.
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  subtitle_offset (float, optional): Offset factor to position the subtitle below the title. Defaults to 0.025.
@@ -85,7 +87,7 @@ class Canvas:
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  fontsize=title_fontsize,
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  color=title_color,
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  fontname=font,
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- x=0.5, # Center the title horizontally
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+ x=title_x,
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  ha="center",
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  va="top",
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  y=title_y,
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: risk-network
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- Version: 0.0.8b26
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+ Version: 0.0.8b27
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  Summary: A Python package for biological network analysis
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  Author: Ira Horecka
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  Author-email: Ira Horecka <ira89@icloud.com>
@@ -10,7 +10,7 @@ risk/annotations/__init__.py
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  risk/annotations/annotations.py
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  risk/annotations/io.py
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  risk/log/__init__.py
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- risk/log/config.py
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+ risk/log/console.py
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  risk/log/params.py
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  risk/neighborhoods/__init__.py
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  risk/neighborhoods/community.py
File without changes