risk-network 0.0.5b5__tar.gz → 0.0.5b6__tar.gz

{risk_network-0.0.5b5 → risk_network-0.0.5b6}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: risk-network
-Version: 0.0.5b5
+Version: 0.0.5b6
 Summary: A Python package for biological network analysis
 Author: Ira Horecka
 Author-email: Ira Horecka <ira89@icloud.com>

{risk_network-0.0.5b5 → risk_network-0.0.5b6}/risk/__init__.py

@@ -7,4 +7,4 @@ RISK: RISK Infers Spatial Kinships
 
 from risk.risk import RISK
 
-__version__ = "0.0.5-beta.5"
+__version__ = "0.0.5-beta.6"

{risk_network-0.0.5b5 → risk_network-0.0.5b6}/risk/network/plot.py

@@ -494,6 +494,7 @@ class NetworkPlotter:
         if max_labels is not None and max_labels < len(filtered_domain_centroids):
             step = len(filtered_domain_centroids) / max_labels
             selected_indices = [int(i * step) for i in range(max_labels)]
+            # Filter the centroids, terms, and valid_indices to only use the selected indices
             filtered_domain_centroids = {
                 k: v
                 for i, (k, v) in enumerate(filtered_domain_centroids.items())
@@ -504,8 +505,8 @@ class NetworkPlotter:
                 for i, (k, v) in enumerate(filtered_domain_terms.items())
                 if i in selected_indices
             }
-            fontcolor = fontcolor[selected_indices]
-            arrow_color = arrow_color[selected_indices]
+            # Update valid_indices to match selected indices
+            valid_indices = [valid_indices[i] for i in selected_indices]
 
         # Calculate the bounding box around the network
         center, radius = _calculate_bounding_box(

{risk_network-0.0.5b5 → risk_network-0.0.5b6}/risk_network.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: risk-network
-Version: 0.0.5b5
+Version: 0.0.5b6
 Summary: A Python package for biological network analysis
 Author: Ira Horecka
 Author-email: Ira Horecka <ira89@icloud.com>

{risk_network-0.0.5b5 → risk_network-0.0.5b6}/risk/constants.py

@@ -3,6 +3,8 @@ risk/constants
 ~~~~~~~~~~~~~~
 """
 
+GROUP_LINKAGE_METHODS = ["single", "complete", "average", "weighted", "centroid", "median", "ward"]
+
 GROUP_DISTANCE_METRICS = [
     "braycurtis",
     "canberra",
@@ -27,5 +29,3 @@ GROUP_DISTANCE_METRICS = [
     "sqeuclidean",
     "yule",
 ]
-
-GROUP_LINKAGE_METHODS = ["single", "complete", "average", "weighted", "centroid", "median", "ward"]