risk-network 0.0.5b1__tar.gz → 0.0.5b2__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/PKG-INFO +1 -1
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/__init__.py +1 -1
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/network/graph.py +1 -2
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/network/plot.py +1 -5
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk_network.egg-info/PKG-INFO +1 -1
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/LICENSE +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/MANIFEST.in +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/README.md +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/pyproject.toml +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/annotations/__init__.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/annotations/annotations.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/annotations/io.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/constants.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/log/__init__.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/log/console.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/log/params.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/neighborhoods/__init__.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/neighborhoods/community.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/neighborhoods/domains.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/neighborhoods/neighborhoods.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/network/__init__.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/network/geometry.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/network/io.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/risk.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/stats/__init__.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/stats/fisher_exact.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/stats/hypergeom.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/stats/permutation/__init__.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/stats/permutation/permutation.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/stats/permutation/test_functions.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk/stats/stats.py +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk_network.egg-info/SOURCES.txt +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk_network.egg-info/dependency_links.txt +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk_network.egg-info/requires.txt +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/risk_network.egg-info/top_level.txt +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/setup.cfg +0 -0
- {risk_network-0.0.5b1 → risk_network-0.0.5b2}/setup.py +0 -0
|
@@ -11,7 +11,6 @@ import networkx as nx
|
|
|
11
11
|
import numpy as np
|
|
12
12
|
import pandas as pd
|
|
13
13
|
import matplotlib
|
|
14
|
-
import matplotlib.cm as cm
|
|
15
14
|
|
|
16
15
|
|
|
17
16
|
class NetworkGraph:
|
|
@@ -270,7 +269,7 @@ def _get_colors(
|
|
|
270
269
|
rgba = matplotlib.colors.to_rgba(kwargs["color"])
|
|
271
270
|
rgbas = [rgba] * num_colors_to_generate
|
|
272
271
|
else:
|
|
273
|
-
colormap =
|
|
272
|
+
colormap = matplotlib.colormaps.get_cmap(cmap)
|
|
274
273
|
# Generate evenly distributed color positions
|
|
275
274
|
color_positions = np.linspace(0, 1, num_colors_to_generate)
|
|
276
275
|
random.shuffle(color_positions) # Shuffle the positions to randomize colors
|
|
@@ -499,10 +499,6 @@ class NetworkPlotter:
|
|
|
499
499
|
fontcolor = fontcolor[selected_indices]
|
|
500
500
|
arrow_color = arrow_color[selected_indices]
|
|
501
501
|
|
|
502
|
-
# Update the terms in the graph after omitting words and filtering
|
|
503
|
-
for domain, terms in filtered_domain_terms.items():
|
|
504
|
-
self.graph.trimmed_domain_to_term[domain] = terms
|
|
505
|
-
|
|
506
502
|
# Calculate the bounding box around the network
|
|
507
503
|
center, radius = _calculate_bounding_box(
|
|
508
504
|
self.graph.node_coordinates, radius_margin=perimeter_scale
|
|
@@ -514,7 +510,7 @@ class NetworkPlotter:
|
|
|
514
510
|
# Annotate the network with labels
|
|
515
511
|
for idx, (domain, pos) in enumerate(best_label_positions.items()):
|
|
516
512
|
centroid = filtered_domain_centroids[domain]
|
|
517
|
-
annotations =
|
|
513
|
+
annotations = filtered_domain_terms[domain].split(" ")[:max_words]
|
|
518
514
|
self.ax.annotate(
|
|
519
515
|
"\n".join(annotations),
|
|
520
516
|
xy=centroid,
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|