risk-network 0.0.13b0__tar.gz → 0.0.13b1__tar.gz

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Files changed (52) hide show
  1. {risk_network-0.0.13b0/src/risk_network.egg-info → risk_network-0.0.13b1}/PKG-INFO +6 -4
  2. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/pyproject.toml +5 -3
  3. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/__init__.py +1 -1
  4. {risk_network-0.0.13b0 → risk_network-0.0.13b1/src/risk_network.egg-info}/PKG-INFO +6 -4
  5. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/LICENSE +0 -0
  6. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/README.md +0 -0
  7. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/setup.cfg +0 -0
  8. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/annotation/__init__.py +0 -0
  9. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/annotation/annotation.py +0 -0
  10. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/annotation/io.py +0 -0
  11. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/annotation/nltk_setup.py +0 -0
  12. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/log/__init__.py +0 -0
  13. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/log/console.py +0 -0
  14. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/log/parameters.py +0 -0
  15. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/__init__.py +0 -0
  16. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/api.py +0 -0
  17. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/community.py +0 -0
  18. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/domains.py +0 -0
  19. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/neighborhoods.py +0 -0
  20. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/stats/__init__.py +0 -0
  21. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/stats/permutation/__init__.py +0 -0
  22. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/stats/permutation/permutation.py +0 -0
  23. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/stats/permutation/test_functions.py +0 -0
  24. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/neighborhoods/stats/tests.py +0 -0
  25. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/__init__.py +0 -0
  26. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/graph/__init__.py +0 -0
  27. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/graph/api.py +0 -0
  28. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/graph/graph.py +0 -0
  29. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/graph/stats.py +0 -0
  30. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/graph/summary.py +0 -0
  31. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/io.py +0 -0
  32. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/__init__.py +0 -0
  33. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/api.py +0 -0
  34. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/canvas.py +0 -0
  35. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/contour.py +0 -0
  36. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/labels.py +0 -0
  37. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/network.py +0 -0
  38. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/plotter.py +0 -0
  39. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/utils/colors.py +0 -0
  40. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/network/plotter/utils/layout.py +0 -0
  41. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/risk.py +0 -0
  42. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk_network.egg-info/SOURCES.txt +0 -0
  43. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk_network.egg-info/dependency_links.txt +0 -0
  44. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk_network.egg-info/requires.txt +0 -0
  45. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk_network.egg-info/top_level.txt +0 -0
  46. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/tests/test_load_annotation.py +0 -0
  47. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/tests/test_load_graph.py +0 -0
  48. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/tests/test_load_io_combinations.py +0 -0
  49. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/tests/test_load_neighborhoods.py +0 -0
  50. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/tests/test_load_network.py +0 -0
  51. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/tests/test_load_plotter.py +0 -0
  52. {risk_network-0.0.13b0 → risk_network-0.0.13b1}/tests/test_log.py +0 -0
{risk_network-0.0.13b0/src/risk_network.egg-info → risk_network-0.0.13b1}/PKG-INFO RENAMED
@@ -1,12 +1,15 @@
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  Metadata-Version: 2.4
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  Name: risk-network
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- Version: 0.0.13b0
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- Summary: A Python package for biological network analysis
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+ Version: 0.0.13b1
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+ Summary: A Python package for biological network analysis.
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  Author-email: Ira Horecka <ira89@icloud.com>
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  License: GPL-3.0-or-later
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- Project-URL: Homepage, https://github.com/riskportal/network
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+ Project-URL: Homepage, https://github.com/risk-portal/network
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+ Project-URL: Issues, https://github.com/risk-portal/network/issues
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+ Classifier: Development Status :: 4 - Beta
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  Classifier: Intended Audience :: Developers
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  Classifier: Intended Audience :: Science/Research
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+ Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
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  Classifier: Operating System :: OS Independent
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  Classifier: Programming Language :: Python :: 3
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  Classifier: Programming Language :: Python :: 3.8
@@ -15,7 +18,6 @@ Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
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  Classifier: Topic :: Scientific/Engineering :: Information Analysis
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  Classifier: Topic :: Scientific/Engineering :: Visualization
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  Classifier: Topic :: Software Development :: Libraries :: Python Modules
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- Classifier: Development Status :: 4 - Beta
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  Requires-Python: >=3.8
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  Description-Content-Type: text/markdown
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  License-File: LICENSE
{risk_network-0.0.13b0 → risk_network-0.0.13b1}/pyproject.toml RENAMED
@@ -5,15 +5,17 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "risk-network"
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  dynamic = ["version"]
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- description = "A Python package for biological network analysis"
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+ description = "A Python package for biological network analysis."
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  authors = [
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  { name = "Ira Horecka", email = "ira89@icloud.com" },
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  ]
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  readme = "README.md"
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  requires-python = ">=3.8"
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  classifiers = [
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+ "Development Status :: 4 - Beta",
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  "Intended Audience :: Developers",
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  "Intended Audience :: Science/Research",
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+ "License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)",
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  "Operating System :: OS Independent",
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  "Programming Language :: Python :: 3",
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  "Programming Language :: Python :: 3.8",
@@ -22,7 +24,6 @@ classifiers = [
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  "Topic :: Scientific/Engineering :: Information Analysis",
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  "Topic :: Scientific/Engineering :: Visualization",
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  "Topic :: Software Development :: Libraries :: Python Modules",
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- "Development Status :: 4 - Beta",
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  ]
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  dependencies = [
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  "ipywidgets",
@@ -47,7 +48,8 @@ dependencies = [
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  text = "GPL-3.0-or-later"
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  [project.urls]
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- "Homepage" = "https://github.com/riskportal/network"
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+ Homepage = "https://github.com/risk-portal/network"
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+ Issues = "https://github.com/risk-portal/network/issues"
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  [tool.setuptools]
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  package-dir = {"" = "src"}
{risk_network-0.0.13b0 → risk_network-0.0.13b1}/src/risk/__init__.py RENAMED
@@ -7,4 +7,4 @@ RISK: Regional Inference of Significant Kinships
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  from risk.risk import RISK
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- __version__ = "0.0.13-beta.0"
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+ __version__ = "0.0.13-beta.1"
{risk_network-0.0.13b0 → risk_network-0.0.13b1/src/risk_network.egg-info}/PKG-INFO RENAMED
@@ -1,12 +1,15 @@
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  Metadata-Version: 2.4
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  Name: risk-network
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- Version: 0.0.13b0
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- Summary: A Python package for biological network analysis
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+ Version: 0.0.13b1
4
+ Summary: A Python package for biological network analysis.
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  Author-email: Ira Horecka <ira89@icloud.com>
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  License: GPL-3.0-or-later
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- Project-URL: Homepage, https://github.com/riskportal/network
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+ Project-URL: Homepage, https://github.com/risk-portal/network
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+ Project-URL: Issues, https://github.com/risk-portal/network/issues
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+ Classifier: Development Status :: 4 - Beta
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  Classifier: Intended Audience :: Developers
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  Classifier: Intended Audience :: Science/Research
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+ Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
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  Classifier: Operating System :: OS Independent
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  Classifier: Programming Language :: Python :: 3
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  Classifier: Programming Language :: Python :: 3.8
@@ -15,7 +18,6 @@ Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
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  Classifier: Topic :: Scientific/Engineering :: Information Analysis
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  Classifier: Topic :: Scientific/Engineering :: Visualization
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  Classifier: Topic :: Software Development :: Libraries :: Python Modules
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- Classifier: Development Status :: 4 - Beta
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  Requires-Python: >=3.8
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  Description-Content-Type: text/markdown
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  License-File: LICENSE
{risk_network-0.0.13b0 → risk_network-0.0.13b1}/LICENSE RENAMED
File without changes