repograph-codeintel 0.1.0__tar.gz

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  1. repograph_codeintel-0.1.0/LICENSE +202 -0
  2. repograph_codeintel-0.1.0/PKG-INFO +295 -0
  3. repograph_codeintel-0.1.0/README.md +266 -0
  4. repograph_codeintel-0.1.0/pyproject.toml +51 -0
  5. repograph_codeintel-0.1.0/setup.cfg +4 -0
  6. repograph_codeintel-0.1.0/src/repograph/__init__.py +3 -0
  7. repograph_codeintel-0.1.0/src/repograph/__main__.py +3 -0
  8. repograph_codeintel-0.1.0/src/repograph/agent_setup.py +224 -0
  9. repograph_codeintel-0.1.0/src/repograph/cli.py +476 -0
  10. repograph_codeintel-0.1.0/src/repograph/config.py +145 -0
  11. repograph_codeintel-0.1.0/src/repograph/extract.py +616 -0
  12. repograph_codeintel-0.1.0/src/repograph/impact.py +558 -0
  13. repograph_codeintel-0.1.0/src/repograph/indexer.py +184 -0
  14. repograph_codeintel-0.1.0/src/repograph/mcp_server.py +130 -0
  15. repograph_codeintel-0.1.0/src/repograph/query.py +485 -0
  16. repograph_codeintel-0.1.0/src/repograph/resolve.py +755 -0
  17. repograph_codeintel-0.1.0/src/repograph/scanner.py +107 -0
  18. repograph_codeintel-0.1.0/src/repograph/store.py +287 -0
  19. repograph_codeintel-0.1.0/src/repograph/test_gate.py +169 -0
  20. repograph_codeintel-0.1.0/src/repograph_codeintel.egg-info/PKG-INFO +295 -0
  21. repograph_codeintel-0.1.0/src/repograph_codeintel.egg-info/SOURCES.txt +23 -0
  22. repograph_codeintel-0.1.0/src/repograph_codeintel.egg-info/dependency_links.txt +1 -0
  23. repograph_codeintel-0.1.0/src/repograph_codeintel.egg-info/entry_points.txt +2 -0
  24. repograph_codeintel-0.1.0/src/repograph_codeintel.egg-info/requires.txt +10 -0
  25. repograph_codeintel-0.1.0/src/repograph_codeintel.egg-info/top_level.txt +1 -0
@@ -0,0 +1,202 @@
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@@ -0,0 +1,295 @@
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+ Metadata-Version: 2.4
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+ Name: repograph-codeintel
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+ Version: 0.1.0
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+ Summary: Evidence-backed codebase intelligence and change-impact analysis for AI coding agents
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+ Author: RepoGraph contributors
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+ License: Apache-2.0
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+ Project-URL: Homepage, https://github.com/INDEX0-RESEARCH-LABS/repograph
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+ Project-URL: Documentation, https://github.com/INDEX0-RESEARCH-LABS/repograph/tree/main/docs
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+ Keywords: code-intelligence,code-graph,mcp,change-impact,dependency-graph,static-analysis,tree-sitter,ai-agents
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+ Classifier: Development Status :: 3 - Alpha
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+ Classifier: Environment :: Console
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+ Classifier: Intended Audience :: Developers
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+ Classifier: License :: OSI Approved :: Apache Software License
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: Topic :: Software Development :: Quality Assurance
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+ Requires-Python: >=3.10
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: typer>=0.12
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+ Requires-Dist: mcp<3,>=2.0
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+ Requires-Dist: tree-sitter>=0.23
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+ Requires-Dist: tree-sitter-python>=0.23
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+ Requires-Dist: tree-sitter-javascript>=0.23
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+ Requires-Dist: tree-sitter-typescript>=0.23
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+ Provides-Extra: dev
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+ Requires-Dist: pytest>=8; extra == "dev"
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+ Requires-Dist: pytest-cov>=5; extra == "dev"
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+ Dynamic: license-file
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+
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+ <h1 align="center">
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+ <picture>
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+ <source media="(prefers-color-scheme: dark)" srcset="docs/assets/hero-dark.svg">
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+ <img src="docs/assets/hero.svg" alt="RepoGraph — local code graph and change impact analysis for AI coding agents" width="620">
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+ </picture>
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+ </h1>
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+
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+ <p align="center">
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+ <a href="https://github.com/INDEX0-RESEARCH-LABS/repograph/actions/workflows/ci.yml"><img src="https://github.com/INDEX0-RESEARCH-LABS/repograph/actions/workflows/ci.yml/badge.svg" alt="CI"></a>
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+ <a href="https://www.python.org/downloads/"><img src="https://img.shields.io/badge/python-3.10%2B-3776AB" alt="Python 3.10+"></a>
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+ <a href="LICENSE"><img src="https://img.shields.io/badge/license-Apache--2.0-blue" alt="Apache-2.0"></a>
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+ <a href="STATUS.md"><img src="https://img.shields.io/badge/status-alpha-orange" alt="alpha"></a>
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+ </p>
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+
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+ <p align="center">
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+ <b>See what a code change touches — before you ship it.</b><br>
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+ Local. No account, no API key, no code execution.
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+ </p>
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+
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+ **RepoGraph is a local code graph and change impact analysis tool for AI coding agents.** It reads your repository, records what imports what, and answers one question:
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+
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+ > **"If I change this file, what else might break?"**
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+
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+ You get the files, tests and routes that depend on it. Every item carries its evidence (file and line) and a confidence label. It also tells you what it **could not see**.
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+
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+ ```bash
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+ repograph index .
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+ repograph impact src/payments/refund.py
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+ ```
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+
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+ Real output from the test fixture, with the route and documentation-mention lines removed for length:
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+
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+ ```
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+ changed files (1): src/shop/services/subscription.py
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+ changed symbols: 1
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+ function cancel src/shop/services/subscription.py:6
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+
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+ direct dependents (4):
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+ [confirmed] src/shop/__init__.py (imports-changed-file at line 1)
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+ [confirmed] src/shop/api/routes.py (imports-changed-file at line 3)
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+ [confirmed] src/shop/services/billing.py (imports-changed-file at line 1)
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+ [confirmed] tests/test_subscription.py (imports-changed-file at line 1)
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+ transitive dependents: 1
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+ [confirmed] depth 2 src/shop/app.py
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+
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+ related tests (1):
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+ [inferred] tests/test_subscription.py (test-imports-changed-file, test-name-matches-changed-file, test-name-matches-dependent)
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+
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+ blind spots:
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+ - repo-dynamic-imports (2): Dynamic imports exist in the repository; their runtime targets may include the changed files.
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+ - repo-parse-errors (1): Files with parse errors contribute no symbols or edges anywhere in the index.
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+
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+ note: absence of static evidence is not evidence of safety.
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+ ```
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+
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+ Python, TypeScript, JavaScript, JSX and TSX. Static analysis only. **Alpha.**
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+
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+ ## Install
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+
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+ Python 3.10 or newer. Nothing else — no database server, no Docker, no cloud.
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+
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+ ```bash
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+ git clone https://github.com/INDEX0-RESEARCH-LABS/repograph.git
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+ cd repograph && python -m venv .venv && .venv/bin/pip install -e .
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+ .venv/bin/repograph version
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+ ```
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+
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+ Not on PyPI yet. `pipx install --editable .` works too. Linux is tested in CI; macOS and Windows should work but are untested.
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+
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+ ## Use
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+
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+ Run this inside **your** project:
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+
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+ ```bash
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+ repograph init . # create .repograph/
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+ repograph index . # build the map
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+ repograph status . # check what was found
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+ repograph impact src/app.py # ask what depends on it
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+ ```
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+
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+ That is the loop. Re-index after you edit: `repograph index . && repograph impact --diff`.
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+
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+ If `repograph` is not found, activate the venv (`source .venv/bin/activate`). These commands only read files.
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+
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+ ## Find the tests a change reaches
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+
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+ ```bash
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+ repograph tests --diff
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+ ```
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+
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+ On `pallets/click` (44 test files), changing `src/click/core.py`:
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+
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+ ```
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+ run these (6, 14% of 44):
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+ [inferred] tests/test_context.py (test-imports-changed-file, test-name-matches-dependent)
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+ [inferred] tests/test_defaults.py (test-imports-changed-file, test-name-matches-dependent)
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+ [inferred] tests/test_deprecations.py (test-imports-changed-file, test-name-matches-dependent)
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+ [inferred] tests/test_parser.py (test-name-matches-dependent)
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+ [inferred] tests/test_shell_completion.py (test-imports-changed-file, test-name-matches-dependent)
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+ [inferred] tests/test_testing.py (test-name-matches-dependent)
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+
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+ cannot rule out (0):
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+
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+ reachable but not selected (37):
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+ tests/conftest.py
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+ tests/test_abort_interrupt.py
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+ tests/test_arguments.py
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+ ...
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+ ```
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+
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+ `--command` prints only the pytest line, for CI. `--strict` exits `3` when a test cannot be ruled out or nothing was selected.
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+
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+ **Measured, and the number is bad.** On 22 one-function mutations across click, Flask and packaging, the selected set caught **41 of 180 failing test files (pooled recall 0.23, median 0.38)** while selecting a median 6.7% of test files. Adding every disclosed "reachable but not selected" file catches 179/180 — but that is 98.9% of the suite, i.e. no saving. Details: `research/TEST_SELECTION_GATE_RESULTS.md`.
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+
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+ So treat this command as **a disclosure aid, not a gate**: it tells you some files a change reaches, and it names the ones it cannot justify selecting. It does not know which tests exercise which behaviour, and it will omit files that fail. **Run the suite before trusting it.**
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+
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+ ## Give it to your agent
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+
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+ One command registers the server **and** installs the instructions that make the agent actually use it:
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+
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+ ```bash
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+ repograph setup .
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+ ```
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+
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+ It writes a project `.mcp.json` plus a Claude Code skill (and a Cursor rule when `.cursor/` exists), shows the diff first, and backs up any file it changes. Add `--client codex` to register it in `~/.codex/config.toml`; `--dry-run` writes nothing.
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+
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+ Restart your agent, then ask:
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+
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+ > What breaks if I change the refund calculation?
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+
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+ Without the instructions an agent tends to keep grepping — a measured failure mode, not a guess. The skill tells it when the graph is the cheaper answer, in what order to call the tools, and to read `blind_spots` before acting.
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+
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+ <details>
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+ <summary><b>Manual MCP config</b></summary>
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+
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+ ```bash
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+ repograph serve --root /path/to/your/project
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+ ```
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+
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+ ```json
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+ {
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+ "mcpServers": {
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+ "repograph": {
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+ "command": "repograph",
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+ "args": ["serve", "--root", "/absolute/path/to/your/project"]
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+ }
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+ }
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+ }
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+ ```
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+
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+ Claude Code and Cursor accept this JSON shape. Use an absolute `--root` and put `repograph` on the client's `PATH`.
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+
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+ </details>
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+
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+ | Tool | What it returns |
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+ | --- | --- |
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+ | `analyze_change_impact` | Dependents, tests, routes, models and blind spots. |
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+ | `find_related_tests` | Candidate tests. Heuristic — always run the suite. |
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+ | `find_references` | Definition and resolved reference sites. |
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+ | `get_dependency_graph` | What a file imports and what imports it. |
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+ | `search_symbols` | Names with file and line. |
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+ | `get_architecture_summary` | Languages, layers, hubs, entry points, routes, models. |
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+
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+ > **Security:** `serve --http` has **no authentication** and binds to `127.0.0.1` by default. Do not expose it to an untrusted network.
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+
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+ ## What the labels mean
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+
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+ | Label | Plain meaning |
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+ | --- | --- |
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+ | `confirmed` | The code says it directly: a real import, or a call in the same file. |
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+ | `inferred` | Worked out from project setup: a TypeScript alias or workspace package. |
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+ | `heuristic` | A guess from patterns: route decorators, model base classes, test names. |
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+ | `unresolved` | Seen in the code, but the target could not be found. Kept and reported. |
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+
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+ ## How accurate is it?
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+
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+ Measured in October 2026 with a pre-registered protocol and two independent AI labelers, on three repositories never used to build the tool.
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+
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+ | Repository | Correct links (precision) | Links found (recall) |
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+ | --- | ---: | ---: |
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+ | [httpx](https://github.com/encode/httpx) (Python) | 100% (30/30) | 100% (30/30) |
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+ | [zustand](https://github.com/pmndrs/zustand) (TypeScript) | 96.7% (58/60) | 100% (58/58) |
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+ | [mocha](https://github.com/mochajs/mocha) (JavaScript) | 100% (30/30) | 78.9% (30/38) |
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+ | **Overall** | **98.3%** (118/120) | **93.7%** (118/126) |
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+
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+ - 95% intervals: precision 94.1%–99.5%, recall 88.0%–96.8%.
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+ - Both mistakes were one bug (a config alias leaking into example apps). Fixed and rechecked; the measured figure stays 118/120.
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+ - All eight missed links were JSON files in mocha, which is why mocha's recall is shown on its own.
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+ - Recall is an estimate, not a census. JSON/config imports, some Node aliases and non-code assets (`.css`, images, `.vue`) are not mapped.
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+
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+ Method, raw samples and threats to validity: [research/EDGE_ACCURACY_RESULTS.md](research/EDGE_ACCURACY_RESULTS.md).
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+
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+ ## How fast is it?
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+
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+ One Linux machine, one run per project (Python 3.14.8, October 2026). Index step only.
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+
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+ | Repository | Files | Symbols | First index | Update (no changes) | Impact query |
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+ | --- | ---: | ---: | ---: | ---: | ---: |
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+ | [express](https://github.com/expressjs/express) | 142 | 63 | 0.28 s | 0.08 s | 2.1 ms |
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+ | [click](https://github.com/pallets/click) | 91 | 2,077 | 0.57 s | 0.06 s | 18.4 ms |
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+ | [vue-core](https://github.com/vuejs/core) | 528 | 2,273 | 1.79 s | 0.24 s | 22.4 ms |
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+ | [fastapi](https://github.com/fastapi/fastapi) | 1,223 | 7,125 | 5.26 s | 1.10 s | 82.1 ms |
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+
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+ Express is a known weak spot: its CommonJS export style yields few symbols from many files. The report says so instead of hiding it.
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+
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+ ## What it cannot do
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+
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+ - **No execution.** Reflection, computed imports and runtime wiring are invisible.
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+ - **Two language families.** Python and JavaScript/TypeScript. Others are ignored.
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+ - **No type checking or data flow.** It follows imports and names, not values.
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+ - **Tests are heuristic.** A measured run on Flask found **24% of failing test files** (60% counting indirect dependents). Run the suite.
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+ - **Routes and models are partial.** Common frameworks only.
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+ - **An empty result is not proof.** It says "no dependents found", not "safe".
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+
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+ It is not a compiler, a type checker, a semantic search engine, or a replacement for tests.
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+
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+ <details>
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+ <summary><b>All commands</b></summary>
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+
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+ | Command | What it does |
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+ | --- | --- |
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+ | `repograph init [path]` | Create `.repograph/` with a config file. |
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+ | `repograph index [path]` | Build or update the map. `--force`, `--reset`, `--json`. |
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+ | `repograph status [path]` | Counts, parse errors, whether an update is needed. |
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+ | `repograph search <text>` | Find symbols and source text. `--kind`, `--limit`. |
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+ | `repograph refs <name>` | Definition and the places that use it. |
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+ | `repograph graph [path]` | Imports in, out or both. `--depth 1-5`, `--format dot`, `--cycles`. |
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+ | `repograph arch` | Languages, layers, hubs, entry points, routes, models. |
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+ | `repograph impact <paths>` | Dependents, tests, routes, blind spots. `--symbol`, `--diff`, `--depth`, `--tests/--no-tests`. |
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+ | `repograph tests [paths]` | Test files a change reaches, files that cannot be ruled out, and reachable files not selected (heuristic; measured recall 0.23). `--diff`, `--base`, `--strict`, `--command`. |
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+ | `repograph setup [path]` | Register the MCP server and install agent instructions. `--client`, `--yes`, `--dry-run`, `--no-skill`. |
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+ | `repograph serve` | MCP server. `--http`, `--host`, `--port`. |
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+
263
+ Every read command accepts `--json`.
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+
265
+ </details>
266
+
267
+ <details>
268
+ <summary><b>Common problems</b></summary>
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+
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+ | Problem | Fix |
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+ | --- | --- |
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+ | `impact --diff` finds nothing | The edit is not indexed. Run `repograph index .` first. |
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+ | Fewer symbols than expected | The code may use a pattern the parser does not cover. Check `status` and `arch` for parse errors. |
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+ | A dependency is missing | It may be dynamic, unresolved, or in another language. Check the blind spots block. |
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+ | MCP client cannot connect | Use an absolute `--root`, and put `repograph` on the client's `PATH`. |
276
+ | Agent never calls the tools | Re-run `repograph setup .`, restart the agent, and confirm the skill landed in `.claude/skills/repograph/SKILL.md`. |
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+
278
+ </details>
279
+
280
+ ## Project
281
+
282
+ - [STATUS.md](STATUS.md) — what is tested, measured and still missing.
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+ - [docs/ARCHITECTURE.md](docs/ARCHITECTURE.md) — modules, schema, algorithms.
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+ - [docs/LIMITATIONS.md](docs/LIMITATIONS.md) — analysis gaps and security model.
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+ - [research/](research/) — accuracy protocols, raw results, decision log.
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+ - [CONTRIBUTING.md](CONTRIBUTING.md) · [SECURITY.md](SECURITY.md)
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+
288
+ ```bash
289
+ .venv/bin/pip install -e '.[dev]'
290
+ .venv/bin/python -m pytest
291
+ ```
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+
293
+ 75 tests, 69% direct coverage, CI on Python 3.10, 3.12 and 3.13. The CLI and MCP server are tested through subprocesses, so coverage does not attribute those runs to their modules.
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+
295
+ Apache-2.0. See [LICENSE](LICENSE).