rectanglepy 0.0.43__tar.gz → 0.0.44__tar.gz

{rectanglepy-0.0.43 → rectanglepy-0.0.44}/.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.0.43
+current_version = 0.0.44
 tag = True
 commit = True
 

{rectanglepy-0.0.43 → rectanglepy-0.0.44}/.cruft.json

@@ -10,7 +10,7 @@
             "author_full_name": "Bernhard Eder",
             "author_email": "yourname@example.com",
             "github_user": "bernheder",
-            "project_repo": "https://github.com/bernheder/Rectangle",
+            "project_repo": "https://github.com/ComputationalBiomedicineGroup/Rectangle",
             "license": "MIT License",
             "_copy_without_render": [
                 ".github/workflows/**.yaml",

{rectanglepy-0.0.43 → rectanglepy-0.0.44}/PKG-INFO

@@ -1,10 +1,10 @@
 Metadata-Version: 2.3
 Name: rectanglepy
-Version: 0.0.43
-Summary: A very interesting piece of code
+Version: 0.0.44
+Summary: Hierarchical deconvolution of bulk  transcriptomics
 Project-URL: Documentation, https://rectanglepy.readthedocs.io/
-Project-URL: Source, https://github.com/bernheder/Rectangle
-Project-URL: Home-page, https://github.com/bernheder/Rectangle
+Project-URL: Source, https://github.com/ComputationalBiomedicineGroup/Rectangle
+Project-URL: Home-page, https://github.com/ComputationalBiomedicineGroup/Rectangle
 Author: Bernhard Eder
 Maintainer-email: Bernhard Eder <Bernhard.Eder@student.uibk.ac.at>
 License: MIT License
@@ -56,7 +56,7 @@ Description-Content-Type: text/markdown
 [![Documentation][badge-docs]][link-docs]
 
 [badge-tests]: https://img.shields.io/github/actions/workflow/status/bernheder/Rectangle/test.yaml?branch=main
-[link-tests]: https://github.com/bernheder/Rectangle/actions/workflows/test.yml
+[link-tests]: https://github.com/ComputationalBiomedicineGroup/Rectangle/actions/workflows/test.yml
 [badge-docs]: https://img.shields.io/readthedocs/Rectangle
 
 Rectangle embodies a ”second-generation” deconvolution methodology, setting itself apart from other second-generation
@@ -77,13 +77,11 @@ Python installed, we recommend installing [Mambaforge](https://github.com/conda-
 
 How to install Rectangle:
 
-<!--
-1) Install the latest release of `Rectangle` from `PyPI <https://pypi.org/project/rectanglepy/>`_:
+Install the latest release of `Rectangle` from `PyPI <https://pypi.org/project/rectanglepy/>`:
 
 ```bash
 pip install rectanglepy
 ```
--->
 
 ## Release notes
 
@@ -98,7 +96,7 @@ If you found a bug, please use the [issue tracker][issue-tracker].
 > t.b.a
 
 [scverse-discourse]: https://discourse.scverse.org/
-[issue-tracker]: https://github.com/bernheder/Rectangle/issues
+[issue-tracker]: https://github.com/ComputationalBiomedicineGroup/Rectangle/issues
 [changelog]: https://Rectanglepy.readthedocs.io/latest/changelog.html
 [link-docs]: https://Rectanglepy.readthedocs.io
 [link-api]: https://Rectanglepy.readthedocs.io/latest/api.html

{rectanglepy-0.0.43 → rectanglepy-0.0.44}/README.md

@@ -4,7 +4,7 @@
 [![Documentation][badge-docs]][link-docs]
 
 [badge-tests]: https://img.shields.io/github/actions/workflow/status/bernheder/Rectangle/test.yaml?branch=main
-[link-tests]: https://github.com/bernheder/Rectangle/actions/workflows/test.yml
+[link-tests]: https://github.com/ComputationalBiomedicineGroup/Rectangle/actions/workflows/test.yml
 [badge-docs]: https://img.shields.io/readthedocs/Rectangle
 
 Rectangle embodies a ”second-generation” deconvolution methodology, setting itself apart from other second-generation
@@ -25,13 +25,11 @@ Python installed, we recommend installing [Mambaforge](https://github.com/conda-
 
 How to install Rectangle:
 
-<!--
-1) Install the latest release of `Rectangle` from `PyPI <https://pypi.org/project/rectanglepy/>`_:
+Install the latest release of `Rectangle` from `PyPI <https://pypi.org/project/rectanglepy/>`:
 
 ```bash
 pip install rectanglepy
 ```
--->
 
 ## Release notes
 
@@ -46,7 +44,7 @@ If you found a bug, please use the [issue tracker][issue-tracker].
 > t.b.a
 
 [scverse-discourse]: https://discourse.scverse.org/
-[issue-tracker]: https://github.com/bernheder/Rectangle/issues
+[issue-tracker]: https://github.com/ComputationalBiomedicineGroup/Rectangle/issues
 [changelog]: https://Rectanglepy.readthedocs.io/latest/changelog.html
 [link-docs]: https://Rectanglepy.readthedocs.io
 [link-api]: https://Rectanglepy.readthedocs.io/latest/api.html

{rectanglepy-0.0.43 → rectanglepy-0.0.44}/docs/conf.py

@@ -16,12 +16,12 @@ sys.path.insert(0, str(HERE / "extensions"))
 
 # -- Project information -----------------------------------------------------
 
-info = metadata("rectanglepy")
+info = metadata("rectangle")
 project_name = info["Name"]
 author = info["Author"]
 copyright = f"{datetime.now():%Y}, {author}."
 version = info["Version"]
-repository_url = f"https://github.com/bernheder/{project_name}"
+repository_url = "https://github.com/ComputationalBiomedicineGroup/Rectangle"
 
 # The full version, including alpha/beta/rc tags
 release = info["Version"]

{rectanglepy-0.0.43 → rectanglepy-0.0.44}/pyproject.toml

@@ -4,8 +4,8 @@ requires = ["hatchling"]
 
 [project]
 name = "rectanglepy"
-version = "0.0.43"
-description = "A very interesting piece of code"
+version = "0.0.44"
+description = "Hierarchical deconvolution of bulk  transcriptomics"
 readme = "README.md"
 requires-python = ">=3.10"
 license = {file = "LICENSE"}
@@ -16,8 +16,8 @@ maintainers = [
     {name = "Bernhard Eder", email = "Bernhard.Eder@student.uibk.ac.at"},
 ]
 urls.Documentation = "https://rectanglepy.readthedocs.io/"
-urls.Source = "https://github.com/bernheder/Rectangle"
-urls.Home-page = "https://github.com/bernheder/Rectangle"
+urls.Source = "https://github.com/ComputationalBiomedicineGroup/Rectangle"
+urls.Home-page = "https://github.com/ComputationalBiomedicineGroup/Rectangle"
 dependencies = [
     "pydeseq2==0.4.1",
     "quadprog==0.1.11",