reasoner-validator 3.7.0__tar.gz → 3.7.2__tar.gz

{reasoner_validator-3.7.0 → reasoner_validator-3.7.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: reasoner-validator
-Version: 3.7.0
+Version: 3.7.2
 Summary: Validation tools for Reasoner API
 Home-page: https://github.com/NCATSTranslator
 License: MIT

{reasoner_validator-3.7.0 → reasoner_validator-3.7.2}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "reasoner-validator"
-version = "3.7.0"
+version = "3.7.2"
 description = "Validation tools for Reasoner API"
 authors = [
     "Richard Bruskiewich <richard.bruskiewich@delphinai.com>",

{reasoner_validator-3.7.0 → reasoner_validator-3.7.2}/reasoner_validator/biolink/__init__.py

@@ -1245,7 +1245,7 @@ class BiolinkValidator(ValidationReporter, BMTWrapper):
 
     # TODO: 11-July-2023: Certain specific 'abstract' or 'mixin' categories used in Knowledge Graphs
     #                     are being validated for now as 'warnings', for short term validation purposes
-    CATEGORY_INCLUSIONS = ["biolink:BiologicalEntity"]
+    CATEGORY_INCLUSIONS = ["biolink:BiologicalEntity", "biolink:InformationContentEntity"]
 
     def validate_category(
             self,

{reasoner_validator-3.7.0 → reasoner_validator-3.7.2}/reasoner_validator/report.py

@@ -1,6 +1,7 @@
 """Error and Warning Reporting Module"""
 from typing import Optional, Dict, List
 from sys import stdout
+from importlib import metadata
 from io import StringIO
 import copy
 
@@ -471,10 +472,10 @@ class ValidationReporter:
                 print(title, file=file)
 
         print(
-            "Validation against TRAPI " +
-            f"'{str(self.trapi_version if self.trapi_version is not None else 'Default')}' version " +
-            "and Biolink Model " +
-            f"'{str(self.biolink_version if self.biolink_version is not None else 'Default')}' version.",
+            f"Reasoner Validator version '{metadata.version('reasoner-validator')}' validating against "
+            f"TRAPI schema version '{str(self.trapi_version if self.trapi_version is not None else 'Default')}' " +
+            "and Biolink Model version " +
+            f"'{str(self.biolink_version if self.biolink_version is not None else 'Default')}'.\n",
             file=file
         )
 

{reasoner_validator-3.7.0 → reasoner_validator-3.7.2}/tests/test_validation_report.py

@@ -405,7 +405,7 @@ def test_messages():
     reporter1.dump(title="My KP Validation Report", id_rows=1, msg_rows=1, compact_format=True, file=stderr)
 
     validation_report: str = reporter1.dumps(id_rows=2, msg_rows=3)
-    assert validation_report.startswith("Validation against TRAPI")
+    assert validation_report.startswith("Reasoner Validator")
 
 
 def test_validator_method():