rcdb 2.3.0__tar.gz → 2.3.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (222) hide show
  1. {rcdb-2.3.0/rcdb.egg-info → rcdb-2.3.2}/PKG-INFO +8 -4
  2. {rcdb-2.3.0 → rcdb-2.3.2}/README.md +4 -3
  3. {rcdb-2.3.0 → rcdb-2.3.2}/pyproject.toml +4 -1
  4. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/app_context.py +12 -0
  5. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/app.py +22 -1
  6. rcdb-2.3.2/rcdb/cli/file.py +333 -0
  7. rcdb-2.3.2/rcdb/cli/run.py +84 -0
  8. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/provider.py +12 -2
  9. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/version.py +1 -1
  10. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/modules/select_values.py +10 -3
  11. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/select_values/index.html +51 -3
  12. {rcdb-2.3.0 → rcdb-2.3.2/rcdb.egg-info}/PKG-INFO +8 -4
  13. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb.egg-info/SOURCES.txt +3 -0
  14. rcdb-2.3.2/tests/test_cli_file.py +241 -0
  15. rcdb-2.3.2/tests/test_cli_run.py +154 -0
  16. rcdb-2.3.0/rcdb/cli/run.py +0 -78
  17. {rcdb-2.3.0 → rcdb-2.3.2}/MANIFEST.in +0 -0
  18. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/__init__.py +0 -0
  19. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/__main__.py +0 -0
  20. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/alias.py +0 -0
  21. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/__init__.py +0 -0
  22. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/__main__.py +0 -0
  23. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/add.py +0 -0
  24. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/context.py +0 -0
  25. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/db.py +0 -0
  26. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/info.py +0 -0
  27. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/ls.py +0 -0
  28. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/repair/__init__.py +0 -0
  29. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/repair/evio_files.py +0 -0
  30. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/rp.py +0 -0
  31. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/select.py +0 -0
  32. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/test_data.py +0 -0
  33. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/cli/web.py +0 -0
  34. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/coda_parser.py +0 -0
  35. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/config_parser.py +0 -0
  36. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/constants.py +0 -0
  37. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/errors.py +0 -0
  38. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/file_archiver.py +0 -0
  39. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/halld_daq_config_parser.py +0 -0
  40. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/lexer.py +0 -0
  41. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/log_format.py +0 -0
  42. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/model.py +0 -0
  43. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/stopwatch.py +0 -0
  44. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/update.py +0 -0
  45. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/__init__.py +0 -0
  46. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/__main__.py +0 -0
  47. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/modules/__init__.py +0 -0
  48. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/modules/conditions.py +0 -0
  49. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/modules/files.py +0 -0
  50. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/modules/logs.py +0 -0
  51. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/modules/runs.py +0 -0
  52. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/modules/statistics.py +0 -0
  53. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/pagination.py +0 -0
  54. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/run_table.py +0 -0
  55. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/dataTables.bootstrap.css +0 -0
  56. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/dataTables.bootstrap.min.css +0 -0
  57. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/dataTables.foundation.css +0 -0
  58. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/dataTables.foundation.min.css +0 -0
  59. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/dataTables.jqueryui.css +0 -0
  60. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/dataTables.jqueryui.min.css +0 -0
  61. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/jquery.dataTables.css +0 -0
  62. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/jquery.dataTables.min.css +0 -0
  63. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/css/jquery.dataTables_themeroller.css +0 -0
  64. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/images/sort_asc.png +0 -0
  65. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/images/sort_asc_disabled.png +0 -0
  66. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/images/sort_both.png +0 -0
  67. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/images/sort_desc.png +0 -0
  68. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/images/sort_desc_disabled.png +0 -0
  69. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/dataTables.bootstrap.js +0 -0
  70. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/dataTables.bootstrap.min.js +0 -0
  71. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/dataTables.foundation.js +0 -0
  72. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/dataTables.foundation.min.js +0 -0
  73. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/dataTables.jqueryui.js +0 -0
  74. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/dataTables.jqueryui.min.js +0 -0
  75. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/jquery.dataTables.js +0 -0
  76. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/DataTables-1.10.10/js/jquery.dataTables.min.js +0 -0
  77. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.bootstrap.css +0 -0
  78. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.bootstrap.min.css +0 -0
  79. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.dataTables.css +0 -0
  80. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.dataTables.min.css +0 -0
  81. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.foundation.css +0 -0
  82. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.foundation.min.css +0 -0
  83. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.jqueryui.css +0 -0
  84. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/css/responsive.jqueryui.min.css +0 -0
  85. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/dataTables.responsive.js +0 -0
  86. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/dataTables.responsive.min.js +0 -0
  87. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/responsive.bootstrap.js +0 -0
  88. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/responsive.bootstrap.min.js +0 -0
  89. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/responsive.foundation.js +0 -0
  90. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/responsive.foundation.min.js +0 -0
  91. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/responsive.jqueryui.js +0 -0
  92. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/Responsive-2.0.0/js/responsive.jqueryui.min.js +0 -0
  93. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.bootstrap.css +0 -0
  94. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.bootstrap.min.css +0 -0
  95. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.dataTables.css +0 -0
  96. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.dataTables.min.css +0 -0
  97. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.foundation.css +0 -0
  98. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.foundation.min.css +0 -0
  99. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.jqueryui.css +0 -0
  100. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/css/rowReorder.jqueryui.min.css +0 -0
  101. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/js/dataTables.rowReorder.js +0 -0
  102. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/RowReorder-1.1.0/js/dataTables.rowReorder.min.js +0 -0
  103. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/datatables.css +0 -0
  104. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/datatables.js +0 -0
  105. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/datatables.min.css +0 -0
  106. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/DataTables/datatables.min.js +0 -0
  107. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap-theme.css +0 -0
  108. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap-theme.css.map +0 -0
  109. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap-theme.min.css +0 -0
  110. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap-theme.min.css.map +0 -0
  111. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap.css +0 -0
  112. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap.css.map +0 -0
  113. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap.min.css +0 -0
  114. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/bootstrap.min.css.map +0 -0
  115. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/buttons.dataTables.min.css +0 -0
  116. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/dataTables.tableTools.css +0 -0
  117. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/jquery-ui.min.css +0 -0
  118. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/jquery-ui.structure.min.css +0 -0
  119. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/jquery-ui.theme.min.css +0 -0
  120. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/jquery.dataTables.min.css +0 -0
  121. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/jquery.dataTables.yadcf.css +0 -0
  122. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/jquery.jsonview.css +0 -0
  123. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/main.css +0 -0
  124. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/select.dataTables.min.css +0 -0
  125. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/css/webintellisense.css +0 -0
  126. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/favicon.png +0 -0
  127. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/fonts/glyphicons-halflings-regular.eot +0 -0
  128. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/fonts/glyphicons-halflings-regular.svg +0 -0
  129. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/fonts/glyphicons-halflings-regular.ttf +0 -0
  130. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/fonts/glyphicons-halflings-regular.woff +0 -0
  131. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/fonts/glyphicons-halflings-regular.woff2 +0 -0
  132. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/humans.txt +0 -0
  133. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/img/glyphicons-halflings-white.png +0 -0
  134. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/img/glyphicons-halflings.png +0 -0
  135. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/img/logo.png +0 -0
  136. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/bootstrap.js +0 -0
  137. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/bootstrap.min.js +0 -0
  138. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/clipboard.min.js +0 -0
  139. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/copy_clipboard.js +0 -0
  140. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/dataTables.buttons.min.js +0 -0
  141. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/dataTables.select.min.js +0 -0
  142. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/jquery-2.1.0.min.js +0 -0
  143. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/jquery-2.1.4.min.js +0 -0
  144. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/jquery-ui.min.js +0 -0
  145. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/jquery.dataTables.min.js +0 -0
  146. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/jquery.dataTables.yadcf.js +0 -0
  147. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/jquery.flot.min.js +0 -0
  148. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/jquery.jsonview.js +0 -0
  149. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/npm.js +0 -0
  150. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/webintellisense-ace.js +0 -0
  151. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/webintellisense-codemirror.js +0 -0
  152. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/webintellisense-textbox.js +0 -0
  153. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/js/webintellisense.js +0 -0
  154. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/robots.txt +0 -0
  155. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/static/style.css +0 -0
  156. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/404.html +0 -0
  157. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/admin/index.html +0 -0
  158. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/admin/layout.html +0 -0
  159. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/admin/user.html +0 -0
  160. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/admin/users.html +0 -0
  161. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/conditions/index.html +0 -0
  162. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/custom_column_run_table.html +0 -0
  163. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/default_run_table.html +0 -0
  164. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/errors/forbidden_page.html +0 -0
  165. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/errors/layout.html +0 -0
  166. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/errors/page_not_found.html +0 -0
  167. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/errors/server_error.html +0 -0
  168. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/files/index.html +0 -0
  169. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/files/info.html +0 -0
  170. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/files/not_found.html +0 -0
  171. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/create_profile.html +0 -0
  172. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/footers/help.html +0 -0
  173. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/login.html +0 -0
  174. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/login_openid.html +0 -0
  175. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/reauth.html +0 -0
  176. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/reset_password.html +0 -0
  177. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/search.html +0 -0
  178. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/frontend/signup.html +0 -0
  179. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/index.html +0 -0
  180. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/layout.html +0 -0
  181. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/layouts/base.html +0 -0
  182. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/layouts/base2.html +0 -0
  183. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/login.html +0 -0
  184. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/logs/index.html +0 -0
  185. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/macros/_ask_user_to_update_ie.html +0 -0
  186. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/macros/_form.html +0 -0
  187. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/macros/_google_analytics.html +0 -0
  188. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/macros/_misc.html +0 -0
  189. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/macros/_reset_password.html +0 -0
  190. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/render_pagination.html +0 -0
  191. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/run_search_box.html +0 -0
  192. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/runs/conditions.html +0 -0
  193. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/runs/example.html +0 -0
  194. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/runs/index.html +0 -0
  195. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/runs/info.html +0 -0
  196. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/runs/not_found.html +0 -0
  197. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/settings/layout.html +0 -0
  198. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/settings/password.html +0 -0
  199. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/settings/profile.html +0 -0
  200. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/show_entries.html +0 -0
  201. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/statistics/index.html +0 -0
  202. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/user/index.html +0 -0
  203. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb/web/templates/user/profile.html +0 -0
  204. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb.egg-info/dependency_links.txt +0 -0
  205. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb.egg-info/entry_points.txt +0 -0
  206. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb.egg-info/requires.txt +0 -0
  207. {rcdb-2.3.0 → rcdb-2.3.2}/rcdb.egg-info/top_level.txt +0 -0
  208. {rcdb-2.3.0 → rcdb-2.3.2}/setup.cfg +0 -0
  209. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_cli_add_condition.py +0 -0
  210. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_cli_add_file.py +0 -0
  211. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_cli_add_type.py +0 -0
  212. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_coda_parser.py +0 -0
  213. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_conditions.py +0 -0
  214. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_config_parser.py +0 -0
  215. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_get_run_periods.py +0 -0
  216. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_get_runs.py +0 -0
  217. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_halld_run_config_parser.py +0 -0
  218. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_save_files.py +0 -0
  219. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_select_runs.py +0 -0
  220. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_select_values.py +0 -0
  221. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_sql_schema_version.py +0 -0
  222. {rcdb-2.3.0 → rcdb-2.3.2}/tests/test_value_comparison.py +0 -0
@@ -1,9 +1,12 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: rcdb
3
- Version: 2.3.0
3
+ Version: 2.3.2
4
4
  Summary: RCDB - Run Conditions DataBase
5
5
  Author-email: Dmitry Romanov <romanov@jlab.org>
6
6
  License-Expression: MIT
7
+ Project-URL: Homepage, https://github.com/JeffersonLab/rcdb
8
+ Project-URL: Documentation, https://jeffersonlab.github.io/rcdb
9
+ Project-URL: Repository, https://github.com/JeffersonLab/rcdb.git
7
10
  Classifier: Development Status :: 5 - Production/Stable
8
11
  Classifier: Programming Language :: Python :: 3
9
12
  Classifier: Programming Language :: Python :: 3.9
@@ -42,10 +45,11 @@ Requires-Dist: pyflakes>=3; extra == "dev"
42
45
  [![C++ examples](https://github.com/JeffersonLab/rcdb/actions/workflows/cpp-examples.yml/badge.svg)](https://github.com/JeffersonLab/rcdb/actions/workflows/cpp-examples.yml)
43
46
  [![Documentation](https://github.com/JeffersonLab/rcdb/actions/workflows/documentation.yml/badge.svg)](https://github.com/JeffersonLab/rcdb/actions/workflows/documentation.yml)
44
47
 
45
- Run Configuration/Conditions Database (RCDB) stores run related information and conditions. It uses MySQL or SQLite databases to store information about runs and provides interfaces to search runs, manage data, automatic CODA integration, etc.
48
+ Run Configuration/Conditions Database (RCDB) stores run related information and conditions.
49
+ It uses MySQL or SQLite databases to store information about runs and provides interfaces to search runs, manage data, automatic CODA integration, etc.
46
50
 
47
51
  The interfaces available are:
48
- - Web site
52
+ - Web
49
53
  - Command line interface (CLI)
50
54
  - Python API
51
55
  - C++ API
@@ -62,4 +66,4 @@ https://halldweb.jlab.org/rcdb/
62
66
 
63
67
  #### SQLite db:
64
68
  Daily updated SQLite database is available here:
65
- https://halldweb.jlab.org/dist/rcdb2.sqlite
69
+ https://halldweb.jlab.org/dist/rcdb.sqlite
@@ -6,10 +6,11 @@
6
6
  [![C++ examples](https://github.com/JeffersonLab/rcdb/actions/workflows/cpp-examples.yml/badge.svg)](https://github.com/JeffersonLab/rcdb/actions/workflows/cpp-examples.yml)
7
7
  [![Documentation](https://github.com/JeffersonLab/rcdb/actions/workflows/documentation.yml/badge.svg)](https://github.com/JeffersonLab/rcdb/actions/workflows/documentation.yml)
8
8
 
9
- Run Configuration/Conditions Database (RCDB) stores run related information and conditions. It uses MySQL or SQLite databases to store information about runs and provides interfaces to search runs, manage data, automatic CODA integration, etc.
9
+ Run Configuration/Conditions Database (RCDB) stores run related information and conditions.
10
+ It uses MySQL or SQLite databases to store information about runs and provides interfaces to search runs, manage data, automatic CODA integration, etc.
10
11
 
11
12
  The interfaces available are:
12
- - Web site
13
+ - Web
13
14
  - Command line interface (CLI)
14
15
  - Python API
15
16
  - C++ API
@@ -26,4 +27,4 @@ https://halldweb.jlab.org/rcdb/
26
27
 
27
28
  #### SQLite db:
28
29
  Daily updated SQLite database is available here:
29
- https://halldweb.jlab.org/dist/rcdb2.sqlite
30
+ https://halldweb.jlab.org/dist/rcdb.sqlite
@@ -50,8 +50,11 @@ dependencies = [
50
50
  examples = ["jsonpickle", "pandas"]
51
51
  dev = ["pyflakes>=3"]
52
52
 
53
+ [project.urls]
54
+ Homepage = "https://github.com/JeffersonLab/rcdb"
55
+ Documentation = "https://jeffersonlab.github.io/rcdb"
56
+ Repository = "https://github.com/JeffersonLab/rcdb.git"
53
57
 
54
- # If you want a console script, define it in [project.scripts]
55
58
  [project.scripts]
56
59
  rcdb = "rcdb.cli.app:rcdb_cli"
57
60
 
@@ -19,6 +19,18 @@ class RcdbApplicationContext(object):
19
19
  self._db_instance = RCDBProvider(self.connection_str)
20
20
  return self._db_instance
21
21
 
22
+ def close(self):
23
+ """Disconnect the database if one was opened.
24
+
25
+ Safe to call when no connection was ever made. The CLI registers this on
26
+ the Click context so the engine is disposed deterministically when the
27
+ command finishes, instead of waiting for garbage collection (which on
28
+ Python 3.13+ leaks a ``ResourceWarning: unclosed database``).
29
+ """
30
+ if self._db_instance is not None:
31
+ self._db_instance.disconnect()
32
+ self._db_instance = None
33
+
22
34
  def require_connected_db(self) -> RCDBProvider:
23
35
  """Return the RCDBProvider, or fail with a clear CLI error if no connection was given.
24
36
 
@@ -12,6 +12,8 @@ from .web import web_command
12
12
  from .info import info_command
13
13
  from .add import add_command
14
14
  from .select import select_command
15
+ from .file import file_command
16
+ from .run import run_command
15
17
 
16
18
 
17
19
  pass_rcdb_context = click.make_pass_decorator(RcdbApplicationContext)
@@ -21,7 +23,18 @@ def get_default_config_path():
21
23
  return os.path.join(os.path.expanduser('~'), '.rcdb_user')
22
24
 
23
25
 
24
- @click.group(invoke_without_command=True)
26
+ class RcdbGroup(click.Group):
27
+ """Top level group that treats `rcdb <number>` as `rcdb run <number>`."""
28
+
29
+ def resolve_command(self, ctx, args):
30
+ # If the first token is not a known command but looks like a run number,
31
+ # dispatch to the `run` command, i.e. `rcdb 1000` == `rcdb run 1000`.
32
+ if args and args[0] not in self.commands and args[0].isdigit():
33
+ args = ["run"] + args
34
+ return super().resolve_command(ctx, args)
35
+
36
+
37
+ @click.group(cls=RcdbGroup, invoke_without_command=True)
25
38
  @click.option('--user-config', envvar='RCDB_USER_CONFIG', default=get_default_config_path, metavar='PATH', help='Changes the user config location.')
26
39
  @click.option('--connection', '-c', envvar='RCDB_CONNECTION', help='Database connection string', default=None, required=False)
27
40
  @click.option('--config', nargs=2, multiple=True, metavar='KEY VALUE', help='Overrides a config key/value pair.')
@@ -47,6 +60,12 @@ def rcdb_cli(ctx, user_config, connection, config, verbose):
47
60
  for key, value in config:
48
61
  ctx.obj.set_config(key, value)
49
62
 
63
+ # Dispose the DB engine deterministically when the command finishes, rather
64
+ # than leaving it to garbage collection. On Python 3.13+ a lingering, GC'd
65
+ # SQLite connection emits "ResourceWarning: unclosed database" at an
66
+ # unpredictable time, which can leak into command output captured by tests.
67
+ ctx.call_on_close(ctx.obj.close)
68
+
50
69
  # Bo commands given
51
70
  if ctx.invoked_subcommand is None:
52
71
  # There is a connection but no subcommand
@@ -67,4 +86,6 @@ rcdb_cli.add_command(web_command)
67
86
  rcdb_cli.add_command(info_command)
68
87
  rcdb_cli.add_command(add_command)
69
88
  rcdb_cli.add_command(select_command)
89
+ rcdb_cli.add_command(file_command)
90
+ rcdb_cli.add_command(run_command)
70
91
 
@@ -0,0 +1,333 @@
1
+ import sys
2
+ import click
3
+ from sqlalchemy import asc, desc
4
+
5
+ from rcdb.provider import RCDBProvider
6
+ from rcdb.model import ConfigurationFile, Run
7
+ from rcdb.cli.context import pass_rcdb_context
8
+
9
+
10
+ # ---------------------------------------------------------------------------
11
+ # Helpers
12
+ # ---------------------------------------------------------------------------
13
+ def _hash_str(value):
14
+ """Normalize a stored sha256 to a printable string.
15
+
16
+ The hash is stored base64-encoded and may come back from the DB as ``bytes``
17
+ (SQLite) or ``str`` (other dialects), so we always render it as ``str``.
18
+ """
19
+ if isinstance(value, (bytes, bytearray)):
20
+ return value.decode("ascii")
21
+ return str(value)
22
+
23
+
24
+ def _resolve_run_range(db, run_min, run_max, run, run_period):
25
+ """Resolve the run filter options into a (run_min, run_max) inclusive range.
26
+
27
+ The three selection mechanisms are mutually exclusive:
28
+ * ``--run-min`` / ``--run-max`` define a range (either side optional),
29
+ * ``--run`` selects a single run,
30
+ * ``--run-period`` selects a named run period.
31
+
32
+ When nothing is given the full range ``(0, sys.maxsize)`` is returned, which
33
+ means "all runs".
34
+ """
35
+ has_range = run_min is not None or run_max is not None
36
+ has_run = run is not None
37
+ has_period = run_period is not None
38
+
39
+ if sum([has_range, has_run, has_period]) > 1:
40
+ raise click.UsageError(
41
+ "--run-min/--run-max, --run and --run-period are mutually exclusive; "
42
+ "use only one of them.")
43
+
44
+ if has_period:
45
+ return _run_period_range(db, run_period)
46
+
47
+ if has_run:
48
+ return run, run
49
+
50
+ lo = run_min if run_min is not None else 0
51
+ hi = run_max if run_max is not None else sys.maxsize
52
+ return lo, hi
53
+
54
+
55
+ def _run_period_range(db, name):
56
+ """Resolve a run period *name* to a (run_min, run_max) range."""
57
+ match = next((p for p in db.get_run_periods() if p.name == name), None)
58
+ if match is None:
59
+ raise click.UsageError("Run period '{}' is not found in DB.".format(name))
60
+ return match.run_min, match.run_max
61
+
62
+
63
+ def _parse_run_spec(db, run_spec):
64
+ """Parse a positional run specifier into a (run_min, run_max) range.
65
+
66
+ The specifier is interpreted, in order:
67
+ 1. a single run number, e.g. ``1000`` -> (1000, 1000)
68
+ 2. a numeric run range, e.g. ``1000-2000``, -> (1000, 2000)
69
+ ``1000-`` -> (1000, maxsize), ``-2000`` -> (0, 2000)
70
+ 3. otherwise a run period name (which may itself contain '-').
71
+ """
72
+ spec = run_spec.strip()
73
+
74
+ # 1) single run number
75
+ if spec.isdigit():
76
+ run = int(spec)
77
+ return run, run
78
+
79
+ # 2) numeric run range "lo-hi" (either side optional)
80
+ if "-" in spec:
81
+ lo_s, _, hi_s = spec.partition("-")
82
+ lo_s, hi_s = lo_s.strip(), hi_s.strip()
83
+ lo_ok = lo_s == "" or lo_s.isdigit()
84
+ hi_ok = hi_s == "" or hi_s.isdigit()
85
+ if lo_ok and hi_ok and (lo_s or hi_s):
86
+ lo = int(lo_s) if lo_s else 0
87
+ hi = int(hi_s) if hi_s else sys.maxsize
88
+ return (lo, hi) if lo <= hi else (hi, lo)
89
+
90
+ # 3) run period name
91
+ return _run_period_range(db, spec)
92
+
93
+
94
+ # ---------------------------------------------------------------------------
95
+ # Group
96
+ # ---------------------------------------------------------------------------
97
+ @click.group("file", help="Inspect configuration/log files stored in the RCDB.")
98
+ @pass_rcdb_context
99
+ def file_command(context):
100
+ """The 'file' group command. See subcommands like:
101
+
102
+ rcdb file vers - list all versions of a file
103
+ rcdb file cat - print the content of a file version
104
+ rcdb file runs - list per-run file versions for a file
105
+ rcdb file ls - list all files for a run / run period
106
+ rcdb file search - find file names by substring
107
+ """
108
+ pass
109
+
110
+
111
+ # ---------------------------------------------------------------------------
112
+ # rcdb file vers <file name>
113
+ # ---------------------------------------------------------------------------
114
+ @file_command.command(name="vers", help="Show all versions of a file.")
115
+ @click.argument("file_name")
116
+ @pass_rcdb_context
117
+ def file_vers(context, file_name):
118
+ """Show all versions (distinct content hashes) stored for FILE_NAME.
119
+
120
+ Each row is printed as::
121
+
122
+ <sha256 hash> - <last run number this version is used>
123
+
124
+ Versions are sorted by their last used run number, descending.
125
+ """
126
+ db = context.require_connected_db()
127
+ assert isinstance(db, RCDBProvider)
128
+
129
+ files = db.session.query(ConfigurationFile) \
130
+ .filter(ConfigurationFile.path == file_name) \
131
+ .all()
132
+
133
+ if not files:
134
+ click.echo("No file '{}' found in DB.".format(file_name), err=True)
135
+ raise click.Abort()
136
+
137
+ rows = []
138
+ for conf_file in files:
139
+ run_numbers = [run.number for run in conf_file.runs]
140
+ last_run = max(run_numbers) if run_numbers else None
141
+ rows.append((_hash_str(conf_file.sha256), last_run))
142
+
143
+ # Sort by last run descending; versions without runs (None) go last.
144
+ rows.sort(key=lambda r: (r[1] is not None, r[1]), reverse=True)
145
+
146
+ for sha256, last_run in rows:
147
+ click.echo("{} - {}".format(sha256, last_run if last_run is not None else "none"))
148
+
149
+
150
+ # ---------------------------------------------------------------------------
151
+ # rcdb file cat <file name> [run] [--run=<run>] [--hash=<hash>]
152
+ # ---------------------------------------------------------------------------
153
+ @file_command.command(name="cat", help="Print the content of a file version.")
154
+ @click.argument("file_name")
155
+ @click.argument("run_arg", required=False, type=int)
156
+ @click.option("--run", "run_opt", type=int, default=None,
157
+ help="Print the version of the file used in this run.")
158
+ @click.option("--hash", "file_hash", default=None,
159
+ help="Print the version with this sha256 hash (a unique prefix is accepted).")
160
+ @pass_rcdb_context
161
+ def file_cat(context, file_name, run_arg, run_opt, file_hash):
162
+ """Dump the raw content of a single version of FILE_NAME.
163
+
164
+ The version is selected either by run (positional RUN or --run) or by
165
+ --hash. Exactly one selector must be provided.
166
+
167
+ Examples::
168
+
169
+ rcdb file cat /path/coda.conf 1000
170
+ rcdb file cat /path/coda.conf --run=1000
171
+ rcdb file cat /path/coda.conf --hash=Hk3...
172
+ """
173
+ db = context.require_connected_db()
174
+ assert isinstance(db, RCDBProvider)
175
+
176
+ run = run_arg if run_arg is not None else run_opt
177
+
178
+ if run is not None and file_hash is not None:
179
+ raise click.UsageError("Provide either a run or --hash, not both.")
180
+ if run is None and file_hash is None:
181
+ raise click.UsageError("Provide a run (positional or --run) or --hash to select a file version.")
182
+
183
+ if file_hash is not None:
184
+ versions = db.session.query(ConfigurationFile) \
185
+ .filter(ConfigurationFile.path == file_name) \
186
+ .all()
187
+ # Match by hash prefix in Python: the stored hash may be bytes or str
188
+ # depending on the DB dialect, so we normalize before comparing.
189
+ matches = [f for f in versions if _hash_str(f.sha256).startswith(file_hash)]
190
+ if not matches:
191
+ click.echo("No version of '{}' with hash '{}' found in DB.".format(file_name, file_hash), err=True)
192
+ raise click.Abort()
193
+ if len(matches) > 1:
194
+ click.echo("Hash prefix '{}' is ambiguous, matches {} versions of '{}'."
195
+ .format(file_hash, len(matches), file_name), err=True)
196
+ raise click.Abort()
197
+ conf_file = matches[0]
198
+ else:
199
+ run_obj = db.get_run(run)
200
+ if run_obj is None:
201
+ click.echo("Run {} is not found in DB.".format(run), err=True)
202
+ raise click.Abort()
203
+ conf_file = db.get_file(run_obj, file_name)
204
+ if conf_file is None:
205
+ click.echo("No file '{}' attached to run {}.".format(file_name, run), err=True)
206
+ raise click.Abort()
207
+
208
+ # Raw dump so the output can be piped to e.g. grep
209
+ click.echo(conf_file.content, nl=False)
210
+
211
+
212
+ # ---------------------------------------------------------------------------
213
+ # rcdb file runs <file name> [run filters] [--asc/--desc] [--limit]
214
+ # ---------------------------------------------------------------------------
215
+ @file_command.command(name="runs", help="List per-run versions of a file.")
216
+ @click.argument("file_name")
217
+ @click.option("--run-min", type=int, default=None, help="Lower run number bound (inclusive).")
218
+ @click.option("--run-max", type=int, default=None, help="Upper run number bound (inclusive).")
219
+ @click.option("--run", type=int, default=None, help="A single run number.")
220
+ @click.option("--run-period", default=None, help="A run period name.")
221
+ @click.option("--desc/--asc", "is_descending", default=True,
222
+ help="Sort resulting runs descending (default) or ascending.")
223
+ @click.option("--limit", type=int, default=None, help="Limit the number of rows.")
224
+ @pass_rcdb_context
225
+ def file_runs(context, file_name, run_min, run_max, run, run_period, is_descending, limit):
226
+ """List the runs that use FILE_NAME and the version (hash) used in each.
227
+
228
+ Each row is printed as::
229
+
230
+ <run number> - <file hash>
231
+
232
+ Sorted by run number descending by default.
233
+ """
234
+ db = context.require_connected_db()
235
+ assert isinstance(db, RCDBProvider)
236
+
237
+ lo, hi = _resolve_run_range(db, run_min, run_max, run, run_period)
238
+
239
+ order = desc if is_descending else asc
240
+ query = db.session.query(Run.number, ConfigurationFile.sha256) \
241
+ .join(ConfigurationFile.runs) \
242
+ .filter(ConfigurationFile.path == file_name) \
243
+ .filter(Run.number >= lo, Run.number <= hi) \
244
+ .order_by(order(Run.number))
245
+
246
+ if limit is not None:
247
+ query = query.limit(limit)
248
+
249
+ rows = query.all()
250
+ if not rows:
251
+ click.echo("No runs found for file '{}' in the given range.".format(file_name), err=True)
252
+ return
253
+
254
+ for run_number, sha256 in rows:
255
+ click.echo("{} - {}".format(run_number, _hash_str(sha256)))
256
+
257
+
258
+ # ---------------------------------------------------------------------------
259
+ # rcdb file ls [run filters]
260
+ # ---------------------------------------------------------------------------
261
+ @file_command.command(name="ls", help="List all files for a run / run period.")
262
+ @click.argument("run_spec", required=False)
263
+ @click.option("--run-min", type=int, default=None, help="Lower run number bound (inclusive).")
264
+ @click.option("--run-max", type=int, default=None, help="Upper run number bound (inclusive).")
265
+ @click.option("--run", type=int, default=None, help="A single run number.")
266
+ @click.option("--run-period", default=None, help="A run period name.")
267
+ @pass_rcdb_context
268
+ def file_ls(context, run_spec, run_min, run_max, run, run_period):
269
+ """List all files attached to runs in the given range, sorted by file name.
270
+
271
+ Each row is printed as::
272
+
273
+ <file hash> - <file name>
274
+
275
+ The runs may be given either as a positional RUN_SPEC - a run number
276
+ (``1000``), a run range (``1000-2000``) or a run period name - or with the
277
+ --run/--run-min/--run-max/--run-period options. With no run filter, all
278
+ files are listed.
279
+ """
280
+ db = context.require_connected_db()
281
+ assert isinstance(db, RCDBProvider)
282
+
283
+ if run_spec is not None:
284
+ if any(x is not None for x in (run_min, run_max, run, run_period)):
285
+ raise click.UsageError(
286
+ "Provide either a positional run/range/period or the "
287
+ "--run/--run-min/--run-max/--run-period options, not both.")
288
+ lo, hi = _parse_run_spec(db, run_spec)
289
+ else:
290
+ lo, hi = _resolve_run_range(db, run_min, run_max, run, run_period)
291
+
292
+ rows = db.session.query(ConfigurationFile.sha256, ConfigurationFile.path) \
293
+ .join(ConfigurationFile.runs) \
294
+ .filter(Run.number >= lo, Run.number <= hi) \
295
+ .distinct() \
296
+ .order_by(asc(ConfigurationFile.path)) \
297
+ .all()
298
+
299
+ if not rows:
300
+ click.echo("No files found in the given range.", err=True)
301
+ return
302
+
303
+ for sha256, path in rows:
304
+ click.echo("{} - {}".format(_hash_str(sha256), path))
305
+
306
+
307
+ # ---------------------------------------------------------------------------
308
+ # rcdb file search <pattern>
309
+ # ---------------------------------------------------------------------------
310
+ @file_command.command(name="search", help="Find file names containing a substring.")
311
+ @click.argument("pattern")
312
+ @pass_rcdb_context
313
+ def file_search(context, pattern):
314
+ """Print all distinct file names whose path contains PATTERN as a substring.
315
+
316
+ Matching is case-insensitive.
317
+ """
318
+ db = context.require_connected_db()
319
+ assert isinstance(db, RCDBProvider)
320
+
321
+ # Escape LIKE wildcards so '%' and '_' (common in file names) match literally.
322
+ # ``ilike`` keeps the filter in the DB and is case-insensitive on all backends
323
+ # (it compiles to ``lower(path) LIKE lower(?)`` on SQLite/MySQL).
324
+ escaped = pattern.replace("\\", "\\\\").replace("%", "\\%").replace("_", "\\_")
325
+
326
+ rows = db.session.query(ConfigurationFile.path) \
327
+ .filter(ConfigurationFile.path.ilike("%" + escaped + "%", escape="\\")) \
328
+ .distinct() \
329
+ .order_by(asc(ConfigurationFile.path)) \
330
+ .all()
331
+
332
+ for (path,) in rows:
333
+ click.echo(path)
@@ -0,0 +1,84 @@
1
+ import click
2
+
3
+ from rcdb.provider import RCDBProvider
4
+ from rcdb.model import ConfigurationFile
5
+ from .context import pass_rcdb_context
6
+
7
+
8
+ # Maximum number of characters shown for a condition value.
9
+ _MAX_VALUE_LEN = 50
10
+
11
+
12
+ def format_condition_value(value):
13
+ """Flatten a condition value to a single line and truncate it.
14
+
15
+ New lines are replaced by spaces and the result is cut to the first
16
+ ``_MAX_VALUE_LEN`` characters, appending ``...`` when truncation happened.
17
+ """
18
+ text = str(value).replace("\r\n", " ").replace("\n", " ").replace("\r", " ")
19
+ if len(text) > _MAX_VALUE_LEN:
20
+ return text[:_MAX_VALUE_LEN] + "..."
21
+ return text
22
+
23
+
24
+ @click.command(name="run")
25
+ @click.argument("run_number", type=int)
26
+ @click.option("-i", "--info", "show_info", is_flag=True, default=False,
27
+ help="Show only the run info line (start - end).")
28
+ @click.option("-c", "--conditions", "show_conditions", is_flag=True, default=False,
29
+ help="Show only conditions (without the CONDITIONS title).")
30
+ @click.option("-f", "--files", "show_files", is_flag=True, default=False,
31
+ help="Show only files (without the FILES title).")
32
+ @pass_rcdb_context
33
+ def run_command(context, run_number, show_info, show_conditions, show_files):
34
+ """Show information about a single run: its time span, conditions and files.
35
+
36
+ `rcdb <run number>` is a shortcut for `rcdb run <run number>`.
37
+
38
+ With no -i/-c/-f flag the full report is printed. Passing one or more flags
39
+ limits the output to just those sections (and drops the section titles).
40
+ """
41
+ db = context.require_connected_db()
42
+ assert isinstance(db, RCDBProvider)
43
+
44
+ run = db.get_run(run_number)
45
+ if not run:
46
+ click.echo("Run {} is not found in DB.".format(run_number), err=True)
47
+ raise click.Abort()
48
+
49
+ # No flag => full report with titles. Any flag => only those sections.
50
+ full = not (show_info or show_conditions or show_files)
51
+
52
+ # ---- Info -----------------------------------------------------------
53
+ if full or show_info:
54
+ start = run.start_time if run.start_time is not None else "?"
55
+ end = run.end_time if run.end_time is not None else "?"
56
+ click.echo("Run {}: {} - {}".format(run.number, start, end))
57
+
58
+ # ---- Conditions -----------------------------------------------------
59
+ if full or show_conditions:
60
+ if full:
61
+ click.echo("")
62
+ click.echo("CONDITIONS:")
63
+ conditions = sorted(run.conditions, key=lambda c: c.name)
64
+ if conditions:
65
+ for condition in conditions:
66
+ click.echo(" {} - {}".format(condition.name, format_condition_value(condition.value)))
67
+ elif full:
68
+ click.echo(" (none)")
69
+
70
+ # ---- Files ----------------------------------------------------------
71
+ if full or show_files:
72
+ important = sorted(f.path for f in run.files
73
+ if f.importance == ConfigurationFile.IMPORTANCE_HIGH)
74
+ other = sorted(f.path for f in run.files
75
+ if f.importance != ConfigurationFile.IMPORTANCE_HIGH)
76
+
77
+ if full:
78
+ click.echo("FILES")
79
+ click.echo(" important:")
80
+ for path in important:
81
+ click.echo(" {}".format(path))
82
+ click.echo(" other files:")
83
+ for path in other:
84
+ click.echo(" {}".format(path))
@@ -150,9 +150,19 @@ class RCDBProvider(object):
150
150
  # Closes connection to data
151
151
  # ------------------------------------------------
152
152
  def disconnect(self):
153
- """Closes connection to database"""
153
+ """Closes connection to database.
154
+
155
+ Closes the ORM session and disposes the SQLAlchemy engine so the
156
+ underlying connection pool releases its DBAPI connections. Without the
157
+ ``engine.dispose()`` the pooled SQLite/MySQL connection stays open until
158
+ the engine is garbage collected, which on Python 3.13+ surfaces as a
159
+ ``ResourceWarning: unclosed database`` at an unpredictable time.
160
+ """
154
161
  self._is_connected = False
155
- self.session.close()
162
+ if self.session is not None:
163
+ self.session.close()
164
+ if self.engine is not None:
165
+ self.engine.dispose()
156
166
 
157
167
  # -------------------------------------------------
158
168
  # indicates ether the connection is open or not
@@ -1,5 +1,5 @@
1
1
  # String version. Used both for setup.py and for internal code
2
- version = '2.3.0'
2
+ version = '2.3.2'
3
3
 
4
4
  # version as the tuple of ints
5
5
  version_tuple = tuple(int(val) for val in version.split('.'))
@@ -1,3 +1,5 @@
1
+ import sys
2
+
1
3
  from flask import Blueprint, request, render_template, flash, g, redirect, url_for
2
4
  from sqlalchemy import desc
3
5
 
@@ -22,16 +24,21 @@ def index():
22
24
  # Handle search request
23
25
  search_query = request.args.get('q', '')
24
26
  run_range = request.args.get('rr', '')
25
- req_conditions_values = req_conditions_str.split(',')
27
+ # Drop blanks so an empty field or trailing comma doesn't become a bogus condition name
28
+ req_conditions_values = [name.strip() for name in req_conditions_str.split(',') if name.strip()]
26
29
 
27
30
  if run_from_str or run_to_str:
28
31
  run_range = run_from_str + "-" + run_to_str
29
32
 
30
33
  run_from, run_to = _parse_run_range(run_range)
31
34
 
35
+ # An empty field means "no bound" - map it to the full run range the API expects
36
+ run_min = run_from if run_from is not None else 0
37
+ run_max = run_to if run_to is not None else sys.maxsize
38
+
32
39
  try:
33
- table = g.tdb.select_values(val_names=req_conditions_values, search_str=search_query, run_min=run_from,
34
- run_max=run_to, sort_desc=True)
40
+ table = g.tdb.select_values(val_names=req_conditions_values, search_str=search_query, run_min=run_min,
41
+ run_max=run_max, sort_desc=True)
35
42
  except Exception as err:
36
43
  flash("Error in performing request: {}".format(err), 'danger')
37
44
  return redirect(url_for('select_values.index'))