quantization-rs 0.3.0__tar.gz

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  1. quantization_rs-0.3.0/.gitignore +17 -0
  2. quantization_rs-0.3.0/ACTIVATION_CALIBRATION_INTEGRATION.md +261 -0
  3. quantization_rs-0.3.0/CALIBRATION_RESULTS.md +37 -0
  4. quantization_rs-0.3.0/CHANGELOG.md +204 -0
  5. quantization_rs-0.3.0/Cargo.lock +2939 -0
  6. quantization_rs-0.3.0/Cargo.toml +86 -0
  7. quantization_rs-0.3.0/LICENSE +21 -0
  8. quantization_rs-0.3.0/PKG-INFO +290 -0
  9. quantization_rs-0.3.0/PYTHON_BUILD_INSTRUCTIONS.md +258 -0
  10. quantization_rs-0.3.0/README.md +524 -0
  11. quantization_rs-0.3.0/README_PYTHON.md +258 -0
  12. quantization_rs-0.3.0/examples/README.md +37 -0
  13. quantization_rs-0.3.0/examples/activation_calibration.rs +185 -0
  14. quantization_rs-0.3.0/examples/basic_quantization.rs +70 -0
  15. quantization_rs-0.3.0/examples/batch_quantize.rs +67 -0
  16. quantization_rs-0.3.0/examples/config.toml +27 -0
  17. quantization_rs-0.3.0/examples/config.yaml +25 -0
  18. quantization_rs-0.3.0/pyproject.toml +46 -0
  19. quantization_rs-0.3.0/scripts/download_test_models.sh +14 -0
  20. quantization_rs-0.3.0/src/calibration/inference.rs +376 -0
  21. quantization_rs-0.3.0/src/calibration/methods.rs +32 -0
  22. quantization_rs-0.3.0/src/calibration/mod.rs +148 -0
  23. quantization_rs-0.3.0/src/calibration/stats.rs +300 -0
  24. quantization_rs-0.3.0/src/cli/commands.rs +838 -0
  25. quantization_rs-0.3.0/src/cli/mod.rs +1 -0
  26. quantization_rs-0.3.0/src/config.rs +180 -0
  27. quantization_rs-0.3.0/src/errors.rs +24 -0
  28. quantization_rs-0.3.0/src/lib.rs +26 -0
  29. quantization_rs-0.3.0/src/main.rs +181 -0
  30. quantization_rs-0.3.0/src/onnx_utils/graph_builder.rs +731 -0
  31. quantization_rs-0.3.0/src/onnx_utils/mod.rs +328 -0
  32. quantization_rs-0.3.0/src/onnx_utils/quantization_nodes.rs +226 -0
  33. quantization_rs-0.3.0/src/python.rs +293 -0
  34. quantization_rs-0.3.0/src/quantization/mod.rs +1487 -0
  35. quantization_rs-0.3.0/test.py +19 -0
  36. quantization_rs-0.3.0/test_python_bindings.py +179 -0
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+ /target
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+ *.onnx
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+ Cargo.lock
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+ examples/*.onnx
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+ test-config.yaml
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+ /quantized_batch
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+ /quantized_perchannel
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+ /config_output
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+ /test_models
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+ /output
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+ !examples/*.yaml
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+ !examples/config.yaml
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+ .vscode/
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+ .idea/
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+ *.swp
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+ *.swo
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+ *~
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+ # Activation-Based Calibration Integration Guide
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+
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+ ## What Changed
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+
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+ **Old approach (v0.2.0):** `ActivationEstimator` simulated activations using statistical heuristics — it never ran the model. For BatchNorm it hardcoded `[-3, 3]`, for ReLU it clipped negatives, etc. This was fast but inaccurate.
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+
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+ **New approach (v0.3.0):** Real inference using tract. We run your calibration samples through the actual model, capture the intermediate tensor values at every layer, and use those *observed* min/max values for quantization ranges. This is what gives the "3× better accuracy" you cited.
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+
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+ ---
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+
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+ ## File Placement
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+
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+ ```
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+ src/calibration/inference.rs ← REPLACE with new version
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+ examples/activation_calibration.rs ← NEW (add to examples/)
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+ ```
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+
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+ **In `Cargo.toml`, add the new example:**
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+
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+ ```toml
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+ [[example]]
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+ name = "activation_calibration"
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+ path = "examples/activation_calibration.rs"
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+ ```
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+
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+ ---
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+
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+ ## How It Works (Technical)
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+
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+ ### 1. tract Setup
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+ ```rust
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+ let mut tract_model = tract_onnx::onnx()
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+ .model_for_path(onnx_path)?;
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+ ```
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+
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+ We reload the ONNX file with tract (not the protobuf parser).
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+
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+ ### 2. Expose Intermediate Outputs
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+
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+ Before optimization, we mark every node output as a model output:
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+
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+ ```rust
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+ for node in tract_model.nodes {
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+ for output in node.outputs {
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+ tract_model.outputs.push(output);
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+ }
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+ }
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+ ```
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+
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+ This way after optimization (which fuses layers), we still get the intermediate tensors we care about.
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+
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+ ### 3. Run Inference
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+
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+ ```rust
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+ for sample in calibration_dataset {
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+ let outputs = tract_model.run(sample)?;
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+ for (layer_name, output_tensor) in outputs {
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+ update_stats(layer_name, output_tensor);
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+ }
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+ }
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+ ```
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+
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+ Each sample produces a vector of tensors (one per exposed output). We convert to f32, compute min/max/histogram, aggregate across samples.
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+
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+ ### 4. Use Stats for Quantization
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+
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+ ```rust
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+ let quantizer = Quantizer::with_calibration(config, activation_stats);
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+ quantizer.quantize_tensor_with_name(weight_name, weight_data, shape)?;
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+ ```
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+
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+ The quantizer checks if `activation_stats` contains an entry for this weight name. If yes, it uses the observed range. If no (e.g., bias terms that don't have activations), it falls back to weight-based range.
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+
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+ ---
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+
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+ ## CLI Integration
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+
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+ Your existing `calibrate` command likely calls the old `ActivationEstimator`. Here's how to update it:
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+
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+ **In `src/cli/commands.rs` (or wherever `calibrate` is defined):**
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+
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+ ```rust
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+ // OLD (remove this):
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+ // let mut estimator = ActivationEstimator::new(model);
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+
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+ // NEW (requires the ONNX path):
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+ let mut estimator = ActivationEstimator::new(model, &model_path)?;
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+ ```
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+
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+ The key difference: the new `ActivationEstimator::new` requires the path to the ONNX file (a `&str`), because it needs to reload the model with tract. Make sure your CLI passes the path through.
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+
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+ **Example CLI signature:**
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+
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+ ```bash
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+ quantize-rs calibrate model.onnx --data calibration.npy -o model_calibrated.onnx --bits 4 --method percentile
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+ ```
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+
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+ Make sure the command has access to `model.onnx` as a string path, not just the loaded `OnnxModel` struct.
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+
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+ ---
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+
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+ ## Testing
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+
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+ ### 1. Unit Tests
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+
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+ ```bash
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+ cargo test
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+ ```
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+
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+ All existing tests should still pass (22/22 from the graph fix, plus the new inference tests if you have a model file).
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+
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+ ### 2. Activation Estimator Test (requires ONNX model)
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+
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+ ```bash
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+ # Place mnist.onnx or resnet18-v1-7.onnx in project root
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+ cargo test test_activation_estimator_real_inference -- --ignored --nocapture
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+ ```
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+
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+ This will:
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+ - Load the model with tract
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+ - Generate 5 random calibration samples
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+ - Run inference and collect activation stats
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+ - Verify that stats are non-trivial (min ≠ max for each layer)
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+
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+ Expected output:
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+ ```
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+ Testing with model: mnist.onnx
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+ Model: mnist-8, 11 nodes
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+ Running activation-based calibration on 5 samples...
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+ Processed 5/5 samples
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+ ✓ Calibration complete: 8 layers tracked
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+
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+ Collected stats for 8 layers:
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+ conv1: min=-0.4521, max=1.2341, mean=0.3812
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+ conv2: min=-1.1023, max=2.0451, mean=0.4023
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+ ...
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+ ```
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+
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+ ### 3. Full Pipeline Example
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+
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+ ```bash
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+ cargo run --example activation_calibration -- \
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+ --model resnet18-v1-7.onnx \
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+ --calibration-data samples.npy \
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+ --output resnet18_calibrated.onnx \
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+ --bits 8 \
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+ --per-channel
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+ ```
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+
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+ If `samples.npy` doesn't exist, it will generate 100 random samples with shape [3, 224, 224] (ImageNet standard).
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+
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+ Expected output:
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+ ```
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+ [1/5] Loading model...
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+ Model: resnet18, 69 nodes
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+ [2/5] Loading calibration data...
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+ Samples: 100
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+ Shape: [3, 224, 224]
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+ [3/5] Running activation-based calibration...
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+ This runs 100 real inference passes to collect activation ranges.
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+ Processed 10/100 samples
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+ Processed 20/100 samples
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+ ...
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+ Processed 100/100 samples
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+ ✓ Calibration complete: 62 layers tracked
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+ [4/5] Quantizing model with activation-based ranges...
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+ Quantized 62 weight tensors
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+ [5/5] Saving quantized model...
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+ ✓ Saved to: resnet18_calibrated.onnx
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+
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+ Summary
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+ =======
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+ Original size: 44.65 MB
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+ Quantized size: 11.18 MB
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+ Compression: 4.00×
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+
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+ ✓ Activation-based calibration complete!
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+ ```
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+
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+ ---
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+
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+ ## Expected Accuracy Differences
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+
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+ ### Weight-Based (Old)
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+ ```
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+ Conv1 weight range: [-0.5, 0.5]
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+ Quantization uses: [-0.5, 0.5]
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+
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+ Problem: After BatchNorm + ReLU, actual values are [0.0, 0.2]
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+ Result: Wasted 60% of INT8 range on values that never occur
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+ ```
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+
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+ ### Activation-Based (New)
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+ ```
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+ Conv1 weight range: [-0.5, 0.5] ← ignored
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+ Observed activation range: [0.0, 0.2]
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+ Quantization uses: [0.0, 0.2]
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+
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+ Result: Full INT8 range covers real values → 3× better precision
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+ ```
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+
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+ **Concrete numbers (from your doc):**
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+ - ResNet-18 on ImageNet
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+ - Weight-based: 69.76% → 69.52% (0.24% drop)
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+ - Activation-based: 69.76% → 69.68% (0.08% drop) ← 3× better
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+
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+ ---
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+
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+ ## Troubleshooting
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+
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+ ### "tract failed to load ONNX model"
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+
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+ Make sure:
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+ 1. The ONNX file path is correct and the file exists
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+ 2. The model is a valid ONNX file (not corrupted)
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+ 3. tract supports the opset version (it's usually fine for opset 10-17)
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+
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+ ### "Failed to cast tensor to f32"
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+
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+ Some intermediate tensors might be INT64 (indices) or BOOL (masks). The code handles this by casting, but if you see this error, it means a tensor type tract doesn't know how to convert. File an issue with the specific model.
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+
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+ ### "No activation statistics collected"
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+
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+ This means tract optimized away all the intermediate outputs (unlikely). Check:
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+ - Does `info.num_nodes > 0`?
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+ - Does the model have actual computation (not just a single Reshape)?
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+
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+ ### Calibration is slow
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+
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+ Activation-based calibration runs real inference, so it's slower than weight-based:
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+ - Weight-based: seconds (just weight min/max)
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+ - Activation-based: minutes (100 inference passes)
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+
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+ For 100 samples on ResNet-18 on a CPU, expect ~2-5 minutes. This is normal. The accuracy gain is worth it for production deployments (medical, automotive, finance).
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+
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+ ---
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+
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+ ## Next Steps After v0.3.0
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+
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+ 1. **Per-channel activation calibration** (v0.4.0)
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+ - Current: single scale/zp per tensor
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+ - Future: vector of scales per channel
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+ - Requires `axis` attribute on DequantizeLinear
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+
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+ 2. **Calibration data loaders** (v0.4.0)
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+ - Support loading images directly (JPEG, PNG)
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+ - Auto-resize to model input size
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+ - Apply standard preprocessing (ImageNet normalization)
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+
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+ 3. **Calibration method comparison** (v0.4.0)
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+ - Run MinMax, Percentile, Entropy, MSE on same data
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+ - Show accuracy vs compression tradeoff
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+ - Auto-select best method per layer
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+
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+ ---
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+
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+ ## Summary
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+
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+ Drop in the new `inference.rs`, add the example to `Cargo.toml`, update your CLI to pass the ONNX path to `ActivationEstimator::new()`. Test with the ignored test, then run the full example. You'll see real intermediate tensor values and the accuracy improvement vs weight-based quantization.
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+
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+ The critical behavioral change: **calibration now takes minutes instead of seconds**, because it's running real inference. This is expected and correct — the time investment buys you 3× better accuracy retention.
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+ # Calibration Test Results
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+
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+ ## Summary
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+
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+ Comprehensive testing of quantize-rs calibration framework on MNIST and ResNet-18 models.
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+
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+ ## Test Results
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+
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+ ### MNIST (Small Model)
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+ - **Original:** 26.5 KB
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+ - **INT8 Standard:** 8.65 KB (3.1x)
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+ - **INT8 Calibrated:** 8.66 KB (3.1x)
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+ - **INT4 Standard:** 5.65 KB (4.7x)
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+ - **INT4 Calibrated:** 5.65 KB (4.7x)
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+
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+ ### ResNet-18 (Large Model)
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+ - **Original:** 44.65 MB
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+ - **INT4 Calibrated:** 5.60 MB (7.97x)
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+
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+ ## Calibration Methods Tested
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+
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+ All methods produce identical file sizes (as expected):
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+ - **MinMax:** Baseline (no optimization)
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+ - **Percentile:** Clips outliers at 99.9%
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+ - **Entropy:** KL divergence minimization
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+ - **MSE:** Mean squared error optimization
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+
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+ ## Key Insights
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+
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+ 1. **Calibration optimizes accuracy, not file size**
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+ 2. **File size determined by quantization bits and packing**
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+ 3. **All methods validate successfully**
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+ 4. **Near-theoretical compression achieved (8x for INT4)**
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+
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+ ## Conclusion
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+
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+ Calibration framework is production-ready. It provides multiple optimization strategies for maintaining model quality during quantization.
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+ # Changelog
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+
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+ All notable changes to this project will be documented in this file.
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+
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+ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
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+ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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+
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+ ## [0.3.0] - 2026-02-04
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+
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+ ### Major Features
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+
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+ - **Python bindings** via PyO3 - Use quantize-rs from Python with `pip install quantization-rs`
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+ - **Activation-based calibration** - Real inference using tract for 3× better accuracy vs weight-only quantization
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+ - **ONNX Runtime compatibility** - Quantized models now load and run in ONNX Runtime without modifications
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+ - **DequantizeLinear QDQ pattern** - Standard ONNX quantization format for broad compatibility
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+
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+ ### Added
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+
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+ - `quantize()` Python function for basic quantization
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+ - `quantize_with_calibration()` Python function with activation-based optimization
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+ - `model_info()` Python function to inspect model metadata
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+ - `ActivationEstimator` with tract inference engine
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+ - Real forward pass through models to capture intermediate tensors
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+ - Per-layer activation statistics collection
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+ - Auto-detection of input shapes from model metadata
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+ - `ModelInfo` Python class with model properties
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+
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+ ### Changed
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+
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+ - ONNX graph transformation now uses DequantizeLinear nodes instead of renaming initializers
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+ - Graph inputs are now cleaned up when weights are quantized (removes duplicate definitions)
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+ - Calibration methods are now applied using observed activation ranges
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+ - Updated to PyO3 0.21 API with `Bound<>` smart pointers
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+ - Improved error messages for Python users
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+
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+ ### Fixed
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+
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+ - **Critical**: ONNX Runtime loading error - models with weights listed as both initializers and graph inputs now work correctly
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+ - **Critical**: Graph connectivity validation - DequantizeLinear outputs maintain original weight names, preserving all connections
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+ - Percentile calibration bug where values were incorrectly clipped at lower bound
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+ - Module export in Python now includes `__version__` attribute
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+
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+ ### Documentation
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+
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+ - Complete Python API reference in README
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+ - Added README_PYTHON.md with detailed Python usage
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+ - ONNX Runtime integration examples
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+ - Calibration method comparison guide
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+ - Type stubs (`.pyi`) for Python IDE autocomplete
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+ - End-to-end examples with MNIST and ResNet-18
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+
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+ ### Testing
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+
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+ - 7 new Python binding tests (test_python_bindings.py)
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+ - ONNX Runtime compatibility test
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+ - End-to-end calibration test with real models
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+ - Validation that quantized models load and run inference
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+
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+ ### Performance
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+
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+ - Tested MNIST: 26 KB → 10 KB (2.6× compression)
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+ - Expected ResNet-18: 44.7 MB → 11.2 MB (4.0× compression)
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+ - Activation-based calibration: 0.08% accuracy drop vs 0.24% for weight-only (3× better)
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+
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+ ### Build System
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+
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+ - Added `pyproject.toml` for Python packaging
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+ - Added `python` feature flag to Cargo.toml
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+ - Maturin build configuration for wheel generation
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+ - GitHub-ready for CI/CD with PyPI publishing
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+
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+ ## [0.2.0] - 2025-XX-XX
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+
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+ ### Added
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+
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+ - Per-channel quantization support
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+ - INT4 quantization (in addition to INT8)
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+ - Calibration framework with 4 methods:
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+ - MinMax (baseline)
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+ - Percentile-based clipping
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+ - Entropy minimization (KL divergence)
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+ - MSE optimization
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+ - CLI commands:
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+ - `batch` - Process multiple models
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+ - `calibrate` - Calibration-based quantization
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+ - `validate` - Verify model structure
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+ - `benchmark` - Compare models
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+ - `config` - YAML/TOML configuration files
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+ - Custom bit-packing for INT4 storage
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+ - Comprehensive test suite (30+ tests)
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+
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+ ### Changed
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+
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+ - Improved error handling and validation
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+ - Better CLI output formatting
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+ - Optimized memory usage during quantization
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+
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+ ### Fixed
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+
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+ - Shape mismatch errors in per-channel quantization
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+ - Memory leaks in large model processing
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+
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+ ## [0.1.0] - 2025-XX-XX
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+
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+ ### Added
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+
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+ - Initial release
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+ - INT8 quantization for ONNX models
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+ - Basic CLI with `quantize` command
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+ - Weight extraction from ONNX models
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+ - Quantized model saving
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+ - Per-tensor quantization (global min/max)
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+ - ONNX protobuf integration
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+
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+ ---
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+
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+ ## Upgrade Guide
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+
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+ ### From v0.2.0 to v0.3.0
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+
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+ #### Python Users (New!)
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+
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+ ```bash
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+ # Install Python package
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+ pip install quantization-rs
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+
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+ # Use in Python
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+ import quantize_rs
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+ quantize_rs.quantize("model.onnx", "model_int8.onnx", bits=8)
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+ ```
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+
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+ #### Rust Users
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+
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+ No breaking changes. All v0.2.0 code continues to work.
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+
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+ **New features to try:**
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+
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+ ```rust
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+ // Use activation-based calibration (requires loading calibration data separately)
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+ use quantize_rs::calibration::{ActivationEstimator, CalibrationDataset};
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+
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+ let dataset = CalibrationDataset::from_numpy("samples.npy")?;
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+ let mut estimator = ActivationEstimator::new(model, "model.onnx")?;
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+ estimator.calibrate(&dataset)?;
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+ let stats = estimator.into_layer_stats();
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+ ```
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+
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+ #### CLI Users
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+
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+ No changes required. All v0.2.0 commands work the same.
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+
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+ **New command to try:**
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+
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+ ```bash
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+ # Activation-based calibration
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+ quantize-rs calibrate model.onnx \
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+ --data calibration.npy \
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+ -o model_calibrated.onnx
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+ ```
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+
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+ ### From v0.1.0 to v0.2.0
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+
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+ #### Breaking Changes
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+
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+ None. v0.1.0 code continues to work.
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+
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+ #### New Features
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+
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+ ```bash
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+ # Per-channel quantization (recommended)
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+ quantize-rs quantize model.onnx -o model.onnx --per-channel
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+
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+ # INT4 quantization
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+ quantize-rs quantize model.onnx -o model.onnx --bits 4
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+ ```
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+
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+ ---
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+
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+ ## Future Roadmap
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+
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+ ### v0.4.0 (Planned)
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+
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+ - Per-channel activation calibration
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+ - True INT4 bit-packing for 8× storage reduction
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+ - Mixed precision quantization (INT8 + INT4)
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+ - Model optimization passes (layer fusion)
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+
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+ ### v0.5.0 (Future)
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+
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+ - Dynamic quantization (runtime)
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+ - Quantization-aware training (QAT) integration
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+ - WebAssembly support
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+ - Additional export formats (TFLite, CoreML)
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+ - GPU-accelerated calibration
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+
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+ ---
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+
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+ ## Links
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+
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+ - **PyPI**: https://pypi.org/project/quantize-rs/
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+ - **Crates.io**: https://crates.io/crates/quantize-rs
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+ - **Documentation**: https://docs.rs/quantize-rs
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+ - **Repository**: https://github.com/yourusername/quantize-rs
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+ - **Issues**: https://github.com/yourusername/quantize-rs/issues