qtdraw 2.4.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- qtdraw-2.4.1/LICENSE +21 -0
- qtdraw-2.4.1/MANIFEST.in +4 -0
- qtdraw-2.4.1/PKG-INFO +67 -0
- qtdraw-2.4.1/docs/README.md +29 -0
- qtdraw-2.4.1/pyproject.toml +72 -0
- qtdraw-2.4.1/qtdraw/__init__.py +10 -0
- qtdraw-2.4.1/qtdraw/core/dialog_about.py +142 -0
- qtdraw-2.4.1/qtdraw/core/dialog_preference.py +358 -0
- qtdraw-2.4.1/qtdraw/core/pyvista_widget.py +4077 -0
- qtdraw-2.4.1/qtdraw/core/pyvista_widget_setting.py +563 -0
- qtdraw-2.4.1/qtdraw/core/qtdraw.png +0 -0
- qtdraw-2.4.1/qtdraw/core/qtdraw_app.py +2921 -0
- qtdraw-2.4.1/qtdraw/multipie/dialog_info.py +398 -0
- qtdraw-2.4.1/qtdraw/multipie/dialog_modulation.py +209 -0
- qtdraw-2.4.1/qtdraw/multipie/dialog_multipie.py +1704 -0
- qtdraw-2.4.1/qtdraw/multipie/plugin_multipie.py +1160 -0
- qtdraw-2.4.1/qtdraw/multipie/plugin_multipie_setting.py +443 -0
- qtdraw-2.4.1/qtdraw/multipie/util.py +182 -0
- qtdraw-2.4.1/qtdraw/parser/converter.py +705 -0
- qtdraw-2.4.1/qtdraw/parser/data_group.py +239 -0
- qtdraw-2.4.1/qtdraw/parser/element.py +231 -0
- qtdraw-2.4.1/qtdraw/parser/read_material.py +40 -0
- qtdraw-2.4.1/qtdraw/parser/util.py +221 -0
- qtdraw-2.4.1/qtdraw/parser/vesta.py +130 -0
- qtdraw-2.4.1/qtdraw/parser/xsf.py +90 -0
- qtdraw-2.4.1/qtdraw/scripts/conv_qtdraw2.py +24 -0
- qtdraw-2.4.1/qtdraw/scripts/qtdraw.py +27 -0
- qtdraw-2.4.1/qtdraw/util/basic_object.py +926 -0
- qtdraw-2.4.1/qtdraw/util/color_selector_util.py +92 -0
- qtdraw-2.4.1/qtdraw/util/latex_to_png.py +47 -0
- qtdraw-2.4.1/qtdraw/util/latex_to_svg.py +136 -0
- qtdraw-2.4.1/qtdraw/util/logging_util.py +186 -0
- qtdraw-2.4.1/qtdraw/util/pdf_viewer.py +86 -0
- qtdraw-2.4.1/qtdraw/util/qt_event_util.py +153 -0
- qtdraw-2.4.1/qtdraw/util/util.py +259 -0
- qtdraw-2.4.1/qtdraw/util/util_axis.py +453 -0
- qtdraw-2.4.1/qtdraw/util/util_str.py +345 -0
- qtdraw-2.4.1/qtdraw/widget/custom_widget.py +733 -0
- qtdraw-2.4.1/qtdraw/widget/delegate.py +188 -0
- qtdraw-2.4.1/qtdraw/widget/group_model.py +688 -0
- qtdraw-2.4.1/qtdraw/widget/group_view.py +253 -0
- qtdraw-2.4.1/qtdraw/widget/message_box.py +43 -0
- qtdraw-2.4.1/qtdraw/widget/tab_group_view.py +80 -0
- qtdraw-2.4.1/qtdraw/widget/table_view.py +50 -0
- qtdraw-2.4.1/qtdraw/widget/validator.py +348 -0
- qtdraw-2.4.1/qtdraw.egg-info/PKG-INFO +67 -0
- qtdraw-2.4.1/qtdraw.egg-info/SOURCES.txt +51 -0
- qtdraw-2.4.1/qtdraw.egg-info/dependency_links.txt +1 -0
- qtdraw-2.4.1/qtdraw.egg-info/entry_points.txt +3 -0
- qtdraw-2.4.1/qtdraw.egg-info/requires.txt +16 -0
- qtdraw-2.4.1/qtdraw.egg-info/top_level.txt +1 -0
- qtdraw-2.4.1/setup.cfg +4 -0
- qtdraw-2.4.1/setup.py +3 -0
qtdraw-2.4.1/LICENSE
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MIT License
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Copyright (c) 2021-2023 Hiroaki Kusunose
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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qtdraw-2.4.1/MANIFEST.in
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qtdraw-2.4.1/PKG-INFO
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Metadata-Version: 2.4
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Name: qtdraw
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Version: 2.4.1
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Summary: 3D drawing tool for molecules and crystals based on Pyvista and PySide6.
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Author-email: Hiroaki Kusunose <hiroaki.kusunose@gmail.com>
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License: MIT
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Project-URL: Homepage, https://github.com/CMT-MU/QtDraw
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Project-URL: Issues, https://github.com/CMT-MU/QtDraw/issues
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Keywords: pyvista,PySide6,multipie
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Classifier: Intended Audience :: Science/Research
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Classifier: Topic :: Scientific/Engineering :: Information Analysis
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Classifier: License :: OSI Approved :: MIT License
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Classifier: Operating System :: Microsoft :: Windows
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Classifier: Operating System :: POSIX
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Classifier: Operating System :: MacOS
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Requires-Python: >=3.11
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Description-Content-Type: text/markdown
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License-File: LICENSE
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Requires-Dist: numpy
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Requires-Dist: Cython
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Requires-Dist: matplotlib
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Requires-Dist: PySide6
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Requires-Dist: pyvista
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Requires-Dist: pyvistaqt
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Requires-Dist: click
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Requires-Dist: black
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Requires-Dist: ipython
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Requires-Dist: pymatgen
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Requires-Dist: gcoreutils
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Requires-Dist: multipie
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Provides-Extra: dev
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Requires-Dist: jupyter-book; extra == "dev"
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Requires-Dist: ghp-import; extra == "dev"
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Dynamic: license-file
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# [QtDraw](https://cmt-mu.github.io/QtDraw/)
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3D drawing tool for molecules and crystals based on [PyVista](https://docs.pyvista.org/) and [PySide6](https://doc.qt.io/qtforpython-6/index.html).
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Drawings are associated with crystallographic symmetry operations provided by [MultiPie](https://github.com/CMT-MU/MultiPie).
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- **Authors**: Hiroaki Kusunose
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- **Citing QtDraw and MultiPie**: If you are using QtDraw and/or MultiPie in your scientific research, please help our scientific visibility by citing our work:
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> Hiroaki Kusunose, Rikuto Oiwa, and Satoru Hayami, Symmetry-adapted modeling for molecules and crystals, Phys. Rev. B <b>107</b>, 195118 (2023).<br>
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> DOI: [https://doi.org/10.1103/PhysRevB.107.195118](https://doi.org/10.1103/PhysRevB.107.195118)
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- **Installation**: QtDraw can be installed from PyPI using pip on Python >= 3.11:
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```
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pip install qtdraw
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```
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- **Shell commands**:
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- `qtdraw [filename]` : Open QtDraw file.
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- `conv_qtdraw2 [ver1_file.qtdw]` : Convert Version 1 `.qtdw` file into this version (Version 2).
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- **Requirements**:
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- This library requires [TeXLive](https://www.tug.org/texlive/) environment.
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- Symmetry operation supports are provided by [MultiPie](https://github.com/CMT-MU/MultiPie).
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- **See also**:
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- [Manual](https://cmt-mu.github.io/QtDraw/src/overview.html).
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- [MultiPie tutorial (in Japanese)](https://cmt-mu.github.io/MultiPieTutorial/)
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- [QtDraw tutorial (in Japanese)](https://cmt-mu.github.io/QtDrawTutorial/)
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- Source : [PyPI](https://pypi.org/project/qtdraw/) or [GitHub](https://github.com/CMT-MU/QtDraw)
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# [QtDraw](https://cmt-mu.github.io/QtDraw/)
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3D drawing tool for molecules and crystals based on [PyVista](https://docs.pyvista.org/) and [PySide6](https://doc.qt.io/qtforpython-6/index.html).
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Drawings are associated with crystallographic symmetry operations provided by [MultiPie](https://github.com/CMT-MU/MultiPie).
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- **Authors**: Hiroaki Kusunose
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- **Citing QtDraw and MultiPie**: If you are using QtDraw and/or MultiPie in your scientific research, please help our scientific visibility by citing our work:
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> Hiroaki Kusunose, Rikuto Oiwa, and Satoru Hayami, Symmetry-adapted modeling for molecules and crystals, Phys. Rev. B <b>107</b>, 195118 (2023).<br>
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> DOI: [https://doi.org/10.1103/PhysRevB.107.195118](https://doi.org/10.1103/PhysRevB.107.195118)
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- **Installation**: QtDraw can be installed from PyPI using pip on Python >= 3.11:
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```
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pip install qtdraw
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```
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- **Shell commands**:
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- `qtdraw [filename]` : Open QtDraw file.
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- `conv_qtdraw2 [ver1_file.qtdw]` : Convert Version 1 `.qtdw` file into this version (Version 2).
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- **Requirements**:
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- This library requires [TeXLive](https://www.tug.org/texlive/) environment.
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- Symmetry operation supports are provided by [MultiPie](https://github.com/CMT-MU/MultiPie).
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- **See also**:
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- [Manual](https://cmt-mu.github.io/QtDraw/src/overview.html).
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- [MultiPie tutorial (in Japanese)](https://cmt-mu.github.io/MultiPieTutorial/)
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- [QtDraw tutorial (in Japanese)](https://cmt-mu.github.io/QtDrawTutorial/)
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- Source : [PyPI](https://pypi.org/project/qtdraw/) or [GitHub](https://github.com/CMT-MU/QtDraw)
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[build-system]
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requires = ["setuptools"]
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build-backend = "setuptools.build_meta"
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[project]
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name = "qtdraw"
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dependencies = [
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"numpy",
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"Cython",
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"matplotlib",
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"PySide6",
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"pyvista",
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"pyvistaqt",
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"click",
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"black",
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"ipython",
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"pymatgen",
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"gcoreutils",
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"multipie",
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]
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dynamic = ["version"]
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requires-python = ">=3.11"
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authors = [
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{ name="Hiroaki Kusunose", email="hiroaki.kusunose@gmail.com" },
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]
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description = "3D drawing tool for molecules and crystals based on Pyvista and PySide6."
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readme = "docs/README.md"
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keywords = ['pyvista', 'PySide6', 'multipie']
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license = {text = "MIT"}
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classifiers = [
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'Intended Audience :: Science/Research',
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'Topic :: Scientific/Engineering :: Information Analysis',
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'License :: OSI Approved :: MIT License',
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'Operating System :: Microsoft :: Windows',
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'Operating System :: POSIX',
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'Operating System :: MacOS',
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'Programming Language :: Python :: 3.11',
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'Programming Language :: Python :: 3.12',
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'Programming Language :: Python :: 3.13',
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]
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[project.urls]
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Homepage = "https://github.com/CMT-MU/QtDraw"
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Issues = "https://github.com/CMT-MU/QtDraw/issues"
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[project.scripts]
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"qtdraw" = "qtdraw.scripts.qtdraw:cmd"
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"conv_qtdraw2" = "qtdraw.scripts.conv_qtdraw2:cmd"
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[project.optional-dependencies]
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dev = [
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"jupyter-book",
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"ghp-import",
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]
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[tool.setuptools.dynamic]
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version = {attr = "qtdraw.__version__"}
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[tool.setuptools.packages.find]
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include = ['qtdraw', 'qtdraw.*']
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exclude = ["build", "tests"]
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[tool.black]
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line-length = 130
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[tool.build_sphinx]
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source-dir = 'docs'
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build-dir = './docs/_build'
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all_files = 1
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[tool.upload_sphinx]
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upload-dir = 'docs/_build/html'
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"""
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About dialog.
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This module provides about dialog for PyVistaWidget.
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"""
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from pathlib import Path
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import sys
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from numpy import __version__ as numpy_ver
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from sympy import __version__ as sympy_ver
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from matplotlib import __version__ as matplot_ver
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from PySide6 import __version__ as pyside6_ver
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import pyvista as pv
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from pyvistaqt import __version__ as pyvistaqt_ver
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from PySide6.QtWidgets import QDialog, QWidget, QDialogButtonBox, QSizePolicy
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from PySide6.QtGui import QPixmap
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from qtdraw.widget.custom_widget import Layout, Label, VSpacer
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from qtdraw.__init__ import __version__, __date__, __author__
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from qtdraw.util.util import check_multipie
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# ==================================================
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class AboutDialog(QDialog):
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# ==================================================
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def __init__(self, widget, parent=None):
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"""
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About dialog.
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Args:
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widget (PyVistaWidget): widget.
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parent (QWidget, optional): parent.
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"""
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super().__init__(parent)
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self.setWindowTitle("About")
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self.resize(100, 100)
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policy = QSizePolicy(QSizePolicy.Minimum, QSizePolicy.Minimum)
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self.setSizePolicy(policy)
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self.pvw = widget
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# buttons.
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button = QDialogButtonBox(QDialogButtonBox.Ok)
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button.accepted.connect(self.accept)
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panel = self.create_about_panel(self)
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# main layout
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layout = Layout(self)
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layout.setContentsMargins(20, 20, 20, 20)
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layout.addWidget(panel, 0, 0, 1, 1)
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|
51
|
+
layout.addWidget(button, 1, 0, 1, 1)
|
|
52
|
+
|
|
53
|
+
# ==================================================
|
|
54
|
+
def create_about_panel(self, parent):
|
|
55
|
+
"""
|
|
56
|
+
Create about panel.
|
|
57
|
+
"""
|
|
58
|
+
indent = " " * 4
|
|
59
|
+
vtk_ver = ".".join(map(str, pv.vtk_version_info))
|
|
60
|
+
pyvista_ver = pv._version.__version__
|
|
61
|
+
python_ver = sys.version.replace(" [", f"\n{indent+indent}[")
|
|
62
|
+
multipie = "version" in self.pvw._status["multipie"].keys()
|
|
63
|
+
|
|
64
|
+
panel = QWidget(parent)
|
|
65
|
+
layout = Layout(panel)
|
|
66
|
+
|
|
67
|
+
label_icon = Label(parent)
|
|
68
|
+
file = str(Path(__file__).parent / "qtdraw.png")
|
|
69
|
+
pix = QPixmap(file)
|
|
70
|
+
pix = pix.scaledToHeight(int(2.5 * self.height()))
|
|
71
|
+
label_icon.setPixmap(pix)
|
|
72
|
+
label_qtdraw = Label(parent, "QtDraw", True)
|
|
73
|
+
label_copyright = Label(parent, self.pvw.copyright)
|
|
74
|
+
label_python = Label(parent, f"\n{indent}Python: Ver. {python_ver}")
|
|
75
|
+
label_pyvista = Label(parent, f"{indent}PyVista: Ver. {pyvista_ver}")
|
|
76
|
+
label_pvqt = Label(parent, f"{indent}PyVistaQt: Ver. {pyvistaqt_ver}")
|
|
77
|
+
label_vtk = Label(parent, f"{indent}VTK: Ver. {vtk_ver}")
|
|
78
|
+
label_qt = Label(parent, f"{indent}PySide6: Ver. {pyside6_ver}")
|
|
79
|
+
label_numpy = Label(parent, f"{indent}NumPy: Ver. {numpy_ver}")
|
|
80
|
+
label_sympy = Label(parent, f"{indent}SymPy: Ver. {sympy_ver}")
|
|
81
|
+
label_matplotlib = Label(parent, f"{indent}Matplotlib: Ver. {matplot_ver}")
|
|
82
|
+
multipie = check_multipie()
|
|
83
|
+
if multipie:
|
|
84
|
+
from multipie import __version__ as multipie_ver
|
|
85
|
+
|
|
86
|
+
label_multipie = Label(parent, f"{indent}MultiPie: Ver. {multipie_ver}")
|
|
87
|
+
|
|
88
|
+
panel1 = QWidget(parent)
|
|
89
|
+
layout1 = Layout(panel1)
|
|
90
|
+
layout1.setContentsMargins(10, 10, 10, 10)
|
|
91
|
+
layout1.addWidget(label_qtdraw, 0, 0, 1, 1)
|
|
92
|
+
layout1.addWidget(label_copyright, 1, 0, 1, 1)
|
|
93
|
+
layout1.addWidget(label_python, 2, 0, 1, 1)
|
|
94
|
+
layout1.addWidget(label_pyvista, 3, 0, 1, 1)
|
|
95
|
+
layout1.addWidget(label_pvqt, 4, 0, 1, 1)
|
|
96
|
+
layout1.addWidget(label_vtk, 5, 0, 1, 1)
|
|
97
|
+
layout1.addWidget(label_qt, 6, 0, 1, 1)
|
|
98
|
+
layout1.addWidget(label_numpy, 7, 0, 1, 1)
|
|
99
|
+
layout1.addWidget(label_sympy, 8, 0, 1, 1)
|
|
100
|
+
layout1.addWidget(label_matplotlib, 9, 0, 1, 1)
|
|
101
|
+
if multipie:
|
|
102
|
+
layout1.addWidget(label_multipie, 10, 0, 1, 1)
|
|
103
|
+
layout1.addItem(VSpacer(), 11, 0, 1, 1)
|
|
104
|
+
else:
|
|
105
|
+
layout1.addItem(VSpacer(), 10, 0, 1, 1)
|
|
106
|
+
|
|
107
|
+
layout.addWidget(label_icon, 0, 0, 1, 1)
|
|
108
|
+
layout.addWidget(panel1, 0, 1, 1, 1)
|
|
109
|
+
|
|
110
|
+
return panel
|
|
111
|
+
|
|
112
|
+
|
|
113
|
+
# ==================================================
|
|
114
|
+
def get_version_info():
|
|
115
|
+
"""
|
|
116
|
+
Get version info.
|
|
117
|
+
|
|
118
|
+
Returns:
|
|
119
|
+
- (str) -- version info.
|
|
120
|
+
"""
|
|
121
|
+
indent = " " * 4
|
|
122
|
+
vtk_ver = ".".join(map(str, pv.vtk_version_info))
|
|
123
|
+
pyvista_ver = pv._version.__version__
|
|
124
|
+
python_ver = sys.version
|
|
125
|
+
cr = f"Versoin {__version__}, Copyright (C) {__date__} by {__author__}"
|
|
126
|
+
|
|
127
|
+
s = "* QtDraw: " + cr + "\n"
|
|
128
|
+
s += f"{indent}Python: Ver. {python_ver}" + "\n"
|
|
129
|
+
s += f"{indent}PyVista: Ver. {pyvista_ver}" + "\n"
|
|
130
|
+
s += f"{indent}PyVistaQt: Ver. {pyvistaqt_ver}" + "\n"
|
|
131
|
+
s += f"{indent}VTK: Ver. {vtk_ver}" + "\n"
|
|
132
|
+
s += f"{indent}PySide6: Ver. {pyside6_ver}" + "\n"
|
|
133
|
+
s += f"{indent}NumPy: Ver. {numpy_ver}" + "\n"
|
|
134
|
+
s += f"{indent}SymPy: Ver. {sympy_ver}" + "\n"
|
|
135
|
+
s += f"{indent}Matplotlib: Ver. {matplot_ver}" + "\n"
|
|
136
|
+
if check_multipie():
|
|
137
|
+
from multipie import __version__ as multipie_ver
|
|
138
|
+
|
|
139
|
+
s += f"{indent}MultiPie: Ver. {multipie_ver}" + "\n"
|
|
140
|
+
s += "-" * 90
|
|
141
|
+
|
|
142
|
+
return s
|