pyxetabase 4.0.0.dev73__tar.gz → 4.0.0.dev75__tar.gz

{pyxetabase-4.0.0.dev73 → pyxetabase-4.0.0.dev75}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyxetabase
-Version: 4.0.0.dev73
+Version: 4.0.0.dev75
 Summary: A REST client for OpenCGA enterprise REST web services
 Author: Daniel Perez-Gil
 Author-email: daniel.perez@zettagenomics.com

{pyxetabase-4.0.0.dev73 → pyxetabase-4.0.0.dev75}/pyxetabase/rest_clients/cvdb_client.py

@@ -593,6 +593,33 @@ class CVDB(_ParentRestClient):
 
         return self._get(category='analysis', resource='query', subcategory='cvdb/analysis', **options)
 
+    def run_delete(self, data=None, **options):
+        """
+        Delete clinical analyses indexed in CVDB for a given study or a list
+            of clinical analysis IDs.
+        PATH: /{apiVersion}/analysis/cvdb/delete/run
+
+        :param dict data: Parameters: Delete clinical analyses indexed in CVDB
+            for a given study or a list of clinical analysis IDs. (REQUIRED)
+        :param str study: Study [[organization@]project:]study where study and
+            project can be either the ID or UUID.
+        :param str job_id: Job ID. It must be a unique string within the
+            study. An ID will be autogenerated automatically if not provided.
+        :param str job_description: Job description.
+        :param str job_depends_on: Comma separated list of existing job IDs
+            the job will depend on.
+        :param str job_tags: Job tags.
+        :param str job_scheduled_start_time: Time when the job is scheduled to
+            start.
+        :param str job_priority: Priority of the job.
+        :param bool job_dry_run: Flag indicating that the job will be executed
+            in dry-run mode. In this mode, OpenCGA will validate that all
+            parameters and prerequisites are correctly set for successful
+            execution, but the job will not actually run.
+        """
+
+        return self._post(category='analysis', resource='run', subcategory='cvdb/delete', data=data, **options)
+
     def aggregate_evidence(self, **options):
         """
         Calculate and fetch clinical variant evidence aggregation stats.
@@ -1145,13 +1172,12 @@ class CVDB(_ParentRestClient):
 
     def run_index(self, data=None, **options):
         """
-        Index clinical analyses of a OpenCGA project, a study or a list of
-            clinical analyses into CVDB.
+        Index clinical analyses of a study or a list of clinical analyses into
+            CVDB.
         PATH: /{apiVersion}/analysis/cvdb/index/run
 
-        :param dict data: Parameters: Index clinical analyses of a OpenCGA
-            project, a study or a list of clinical analyses into CVDB.
-            (REQUIRED)
+        :param dict data: Parameters: Index clinical analyses of a study or a
+            list of clinical analyses into CVDB. (REQUIRED)
         :param str study: Study [[organization@]project:]study where study and
             project can be either the ID or UUID.
         :param str job_id: Job ID. It must be a unique string within the

{pyxetabase-4.0.0.dev73 → pyxetabase-4.0.0.dev75}/pyxetabase.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyxetabase
-Version: 4.0.0.dev73
+Version: 4.0.0.dev75
 Summary: A REST client for OpenCGA enterprise REST web services
 Author: Daniel Perez-Gil
 Author-email: daniel.perez@zettagenomics.com

{pyxetabase-4.0.0.dev73 → pyxetabase-4.0.0.dev75}/setup.py

@@ -14,7 +14,7 @@ with open(path.join(here, 'README.rst'), encoding='utf-8') as f:
 
 setup(
     name='pyxetabase',
-    version='4.0.0.dev73',
+    version='4.0.0.dev75',
     description='A REST client for OpenCGA enterprise REST web services',
     long_description=long_description,
     long_description_content_type='text/x-rst',