pyxetabase 3.1.0.dev23__tar.gz → 3.1.0.dev24__tar.gz

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  1. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/PKG-INFO +1 -1
  2. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/variant_operation_client.py +27 -0
  3. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase.egg-info/PKG-INFO +1 -1
  4. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/setup.py +1 -1
  5. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/LICENSE +0 -0
  6. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/README.rst +0 -0
  7. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/__init__.py +0 -0
  8. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/commons.py +0 -0
  9. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/exceptions.py +0 -0
  10. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/opencga_client.py +0 -0
  11. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/opencga_config.py +0 -0
  12. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/__init__.py +0 -0
  13. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/_parent_rest_clients.py +0 -0
  14. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/admin_client.py +0 -0
  15. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/alignment_client.py +0 -0
  16. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/clinical_analysis_client.py +0 -0
  17. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/cohort_client.py +0 -0
  18. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/cvdb_client.py +0 -0
  19. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/disease_panel_client.py +0 -0
  20. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/family_client.py +0 -0
  21. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/federation_client.py +0 -0
  22. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/file_client.py +0 -0
  23. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/ga4gh_client.py +0 -0
  24. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/individual_client.py +0 -0
  25. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/job_client.py +0 -0
  26. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/meta_client.py +0 -0
  27. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/organization_client.py +0 -0
  28. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/project_client.py +0 -0
  29. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/sample_client.py +0 -0
  30. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/study_client.py +0 -0
  31. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/user_client.py +0 -0
  32. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/variant_client.py +0 -0
  33. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_clients/workflow_client.py +0 -0
  34. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/rest_response.py +0 -0
  35. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase/retry.py +0 -0
  36. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase.egg-info/SOURCES.txt +0 -0
  37. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase.egg-info/dependency_links.txt +0 -0
  38. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase.egg-info/requires.txt +0 -0
  39. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/pyxetabase.egg-info/top_level.txt +0 -0
  40. {pyxetabase-3.1.0.dev23 → pyxetabase-3.1.0.dev24}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: pyxetabase
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- Version: 3.1.0.dev23
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+ Version: 3.1.0.dev24
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  Summary: A REST client for OpenCGA enterprise REST web services
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  Author: Daniel Perez-Gil
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  Author-email: daniel.perez@zettagenomics.com
@@ -86,6 +86,33 @@ class VariantOperation(_ParentRestClient):
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  return self._delete(category='operation', resource='delete', subcategory='variant/annotation', **options)
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+ def variant_annotation_extension_configure(self, data=None, **options):
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+ """
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+ Install a variant annotation extension and configure the project to
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+ use it.
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+ PATH: /{apiVersion}/operation/variant/annotation/extension/configure
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+
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+ :param str job_id: Job ID. It must be a unique string within the
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+ study. An ID will be autogenerated automatically if not provided.
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+ :param str job_description: Job description.
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+ :param str job_depends_on: Comma separated list of existing job IDs
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+ the job will depend on.
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+ :param str job_tags: Job tags.
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+ :param str job_scheduled_start_time: Time when the job is scheduled to
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+ start.
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+ :param str job_priority: Priority of the job.
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+ :param bool job_dry_run: Flag indicating that the job will be executed
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+ in dry-run mode. In this mode, OpenCGA will validate that all
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+ parameters and prerequisites are correctly set for successful
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+ execution, but the job will not actually run.
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+ :param str study: Study [[organization@]project:]study where study and
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+ project can be either the ID or UUID.
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+ :param dict data: Parameters to configure a variant annotation
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+ extension.
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+ """
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+
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+ return self._post(category='operation', resource='configure', subcategory='variant/annotation/extension', data=data, **options)
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+
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  def index_variant_annotation(self, data=None, **options):
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  """
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  Create and load variant annotations into the database.
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: pyxetabase
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- Version: 3.1.0.dev23
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+ Version: 3.1.0.dev24
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  Summary: A REST client for OpenCGA enterprise REST web services
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  Author: Daniel Perez-Gil
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  Author-email: daniel.perez@zettagenomics.com
@@ -14,7 +14,7 @@ with open(path.join(here, 'README.rst'), encoding='utf-8') as f:
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  setup(
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  name='pyxetabase',
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- version='3.1.0.dev23',
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+ version='3.1.0.dev24',
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  description='A REST client for OpenCGA enterprise REST web services',
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  long_description=long_description,
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  long_description_content_type='text/x-rst',