pyvpmr 240308__tar.gz → 240916__tar.gz

pyvpmr-240916/.devcontainer/Dockerfile

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+FROM debian:12
+
+RUN apt-get update -y && apt-get install -y cmake git g++ libtbb-dev libmpfr-dev libgmp-dev ninja-build python3-dev
+
+ARG UID=1000
+ARG GID=$UID
+
+RUN apt-get install -y sudo && \
+    addgroup --gid $GID nonroot && \
+    adduser --uid $UID --gid $GID --disabled-password --gecos "" nonroot && \
+    echo 'nonroot ALL=(ALL) NOPASSWD: ALL' >> /etc/sudoers
+
+USER nonroot

pyvpmr-240916/.devcontainer/devcontainer.json

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+// For format details, see https://aka.ms/devcontainer.json. For config options, see the
+// README at: https://github.com/devcontainers/templates/tree/main/src/docker-existing-dockerfile
+{
+	"name": "Default",
+	"build": {
+		// Sets the run context to one level up instead of the .devcontainer folder.
+		"context": "..",
+		// Update the 'dockerFile' property if you aren't using the standard 'Dockerfile' filename.
+		"dockerfile": "./Dockerfile"
+	},
+	// Features to add to the dev container. More info: https://containers.dev/features.
+	// "features": {},
+	// Use 'forwardPorts' to make a list of ports inside the container available locally.
+	// "forwardPorts": [],
+	// Uncomment the next line to run commands after the container is created.
+	// "postCreateCommand": "cat /etc/os-release",
+	// Configure tool-specific properties.
+	// "customizations": {},
+	// Uncomment to connect as an existing user other than the container default. More info: https://aka.ms/dev-containers-non-root.
+	"remoteUser": "nonroot"
+}

pyvpmr-240916/.github/workflows/docker.yml

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+name: Docker
+on:
+  push:
+    branches: [ master ]
+jobs:
+  ubuntu-dev:
+    if: "!contains(github.event.head_commit.message, '[skip]')"
+    runs-on: ubuntu-22.04
+    timeout-minutes: 60
+    steps:
+      - name: Clone
+        uses: actions/checkout@v4
+      - name: Login
+        uses: docker/login-action@v3
+        with:
+          username: ${{ secrets.DOCKERHUB_USERNAME }}
+          password: ${{ secrets.DOCKERHUB_TOKEN }}
+      - name: Buildx
+        uses: docker/setup-buildx-action@v3
+      - name: Build
+        uses: docker/build-push-action@v6
+        with:
+          context: .
+          file: ./resource/Dockerfile
+          push: true
+          tags: tlcfem/vpmr:latest

pyvpmr-240916/.github/workflows/release.yml

@@ -0,0 +1,94 @@
+name: Release
+on:
+  push:
+    branches: [ master ]
+  pull_request:
+    branches: [ master ]
+jobs:
+  debian:
+    runs-on: ubuntu-22.04
+    timeout-minutes: 10
+    container: debian:bookworm
+    steps:
+      - name: Setup
+        run: |
+          echo "VPMR_VERSION=$(date +''%y%m%d'')" >> $GITHUB_ENV
+          apt-get update && apt-get install -y cmake git g++ libtbb-dev libmpfr-dev libgmp-dev libpython3-dev python3 python3-distutils wget gtk-update-icon-cache
+      - name: Clone
+        uses: actions/checkout@v4
+      - name: Compile
+        run: |
+          git config --global --add safe.directory /__w/vpmr/vpmr
+          git submodule update --init --recursive
+          cd eigen && git apply ../patch_size.patch && cd ..
+          sed -i 's/3.24/3.13/g' CMakeLists.txt
+          mkdir build && cd build && cmake -DCMAKE_BUILD_TYPE=Release ..
+          make -j"$(nproc)"
+      - name: AppImage
+        run: |
+          echo "version: 1" >> AppImageBuilder.yml
+          echo "AppDir:" >> AppImageBuilder.yml
+          echo "  path: build/AppDir" >> AppImageBuilder.yml
+          echo "  app_info:" >> AppImageBuilder.yml
+          echo "    id: io.github.tlcfem.vpmr" >> AppImageBuilder.yml
+          echo "    name: vpmr" >> AppImageBuilder.yml
+          echo "    version: '${{ env.VPMR_VERSION }}'" >> AppImageBuilder.yml
+          echo "    icon: vpmr" >> AppImageBuilder.yml
+          echo "    exec: usr/bin/vpmr" >> AppImageBuilder.yml
+          echo "    exec_args: \$@" >> AppImageBuilder.yml
+          echo "  files:" >> AppImageBuilder.yml
+          echo "    include:" >> AppImageBuilder.yml
+          echo "    - lib64/ld-linux-x86-64.so.2" >> AppImageBuilder.yml
+          echo "    exclude:" >> AppImageBuilder.yml
+          echo "    - usr/share/man" >> AppImageBuilder.yml
+          echo "    - usr/share/doc/*/README.*" >> AppImageBuilder.yml
+          echo "    - usr/share/doc/*/changelog.*" >> AppImageBuilder.yml
+          echo "    - usr/share/doc/*/NEWS.*" >> AppImageBuilder.yml
+          echo "    - usr/share/doc/*/TODO.*" >> AppImageBuilder.yml
+          echo "  test:" >> AppImageBuilder.yml
+          echo "    fedora-30:" >> AppImageBuilder.yml
+          echo "      image: appimagecrafters/tests-env:fedora-30" >> AppImageBuilder.yml
+          echo "      command: ./AppRun -h" >> AppImageBuilder.yml
+          echo "    debian-stable:" >> AppImageBuilder.yml
+          echo "      image: appimagecrafters/tests-env:debian-stable" >> AppImageBuilder.yml
+          echo "      command: ./AppRun -h" >> AppImageBuilder.yml
+          echo "    archlinux-latest:" >> AppImageBuilder.yml
+          echo "      image: appimagecrafters/tests-env:archlinux-latest" >> AppImageBuilder.yml
+          echo "      command: ./AppRun -h" >> AppImageBuilder.yml
+          echo "    centos-7:" >> AppImageBuilder.yml
+          echo "      image: appimagecrafters/tests-env:centos-7" >> AppImageBuilder.yml
+          echo "      command: ./AppRun -h" >> AppImageBuilder.yml
+          echo "    ubuntu-xenial:" >> AppImageBuilder.yml
+          echo "      image: appimagecrafters/tests-env:ubuntu-xenial" >> AppImageBuilder.yml
+          echo "      command: ./AppRun -h" >> AppImageBuilder.yml
+          echo "AppImage:" >> AppImageBuilder.yml
+          echo "  arch: x86_64" >> AppImageBuilder.yml
+          echo "  update-information: guess" >> AppImageBuilder.yml
+          cat AppImageBuilder.yml
+      - name: Package
+        run: |
+          wget -q https://github.com/linuxdeploy/linuxdeploy/releases/download/1-alpha-20220822-1/linuxdeploy-x86_64.AppImage
+          chmod +x linuxdeploy-x86_64.AppImage
+          wget -q https://github.com/AppImageCrafters/appimage-builder/releases/download/v1.1.0/appimage-builder-1.1.0-x86_64.AppImage
+          chmod +x appimage-builder-1.1.0-x86_64.AppImage
+
+          ./linuxdeploy-x86_64.AppImage --appimage-extract-and-run --appdir AppDir --executable build/vpmr -i resource/vpmr.svg
+          ./appimage-builder-1.1.0-x86_64.AppImage --appimage-extract-and-run --recipe AppImageBuilder.yml --skip-tests
+          
+          chmod +x vpmr-${{ env.VPMR_VERSION }}-x86_64.AppImage
+          ./vpmr-${{ env.VPMR_VERSION }}-x86_64.AppImage --appimage-extract-and-run -h
+      - name: Release
+        if: contains(github.event.head_commit.message, '[publish]')
+        uses: svenstaro/upload-release-action@v2
+        with:
+          repo_token: ${{ secrets.GITHUB_TOKEN }}
+          file: vpmr-${{ env.VPMR_VERSION }}-x86_64.AppImage
+          asset_name: vpmr-${{ env.VPMR_VERSION }}-x86_64.AppImage
+          tag: v${{ env.VPMR_VERSION }}
+          prerelease: false
+          overwrite: true
+      - name: Upload
+        uses: actions/upload-artifact@v4
+        with:
+          name: vpmr-${{ env.VPMR_VERSION }}-x86_64.AppImage
+          path: vpmr-${{ env.VPMR_VERSION }}-x86_64.AppImage

pyvpmr-240916/.github/workflows/wheels.yml

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+name: Wheels
+on:
+  push:
+    branches: [ master ]
+  pull_request:
+    branches: [ master ]
+jobs:
+  build_sdist:
+    name: Build
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+      - name: Setup
+        run: |
+          git submodule update --init --recursive
+          cd eigen && git apply ../patch_size.patch && cd ..
+      - name: Build
+        run: pipx run build --sdist
+      - name: Check
+        run: pipx run twine check dist/*
+      - uses: actions/upload-artifact@v4
+        with:
+          name: pyvpmr-sdist
+          path: dist/*.tar.gz
+  build_wheels:
+    name: Wheels
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [ ubuntu-24.04 ]
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+      - name: Setup
+        run: |
+          git submodule update --init --recursive
+          cd eigen && git apply ../patch_size.patch && cd ..
+      - name: CI Build Wheel
+        uses: pypa/cibuildwheel@v2.20
+      - name: Upload
+        uses: actions/upload-artifact@v4
+        with:
+          name: pyvpmr-${{ matrix.os }}
+          path: wheelhouse/*.whl
+  upload_all:
+    name: Upload
+    needs: [ build_wheels, build_sdist ]
+    runs-on: ubuntu-latest
+    if: contains(github.event.head_commit.message, '[publish]')
+    steps:
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.10"
+      - uses: actions/download-artifact@v4
+        with:
+          pattern: pyvpmr*
+          path: dist
+          merge-multiple: true
+      - uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          user: __token__
+          password: ${{ secrets.PYPI }}

pyvpmr-240916/CMakeLists.txt

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+cmake_minimum_required(VERSION 3.24)
+project(vpmr)
+
+set(CMAKE_CXX_STANDARD 17)
+set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-O3 -g -DNDEBUG")
+
+include_directories(eigen)
+include_directories(eigen/unsupported)
+include_directories(mpreal)
+include_directories(exprtk)
+include_directories(exprtk-custom-types)
+include_directories(pybind11/include)
+
+if (MINGW)
+    find_package(TBB REQUIRED)
+    link_libraries(TBB::tbb)
+else ()
+    link_libraries(tbb)
+endif ()
+
+link_libraries(gmp mpfr)
+
+if (CMAKE_BUILD_TYPE STREQUAL "Debug")
+    set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -g -O0 -fprofile-arcs -ftest-coverage")
+elseif (UNIX)
+    set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -flto=auto")
+endif ()
+
+include(CheckIncludeFile)
+check_include_file("Windows.h" HAVE_WINDOWS_H)
+if (HAVE_WINDOWS_H)
+    add_definitions(-DHAVE_WINDOWS_H)
+endif ()
+
+add_executable(vpmr src/VPMR.cpp)
+
+find_package(Python3 COMPONENTS Development Interpreter)
+if (Python3_FOUND)
+    message(STATUS "Python3: ${Python3_VERSION}")
+    include_directories(${Python3_INCLUDE_DIRS})
+    add_subdirectory(pybind11)
+
+    pybind11_add_module(_pyvpmr src/VPMR.cpp)
+    target_compile_definitions(_pyvpmr PRIVATE PYVPMR)
+endif ()
+
+if (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
+    target_sources(${PROJECT_NAME} PRIVATE resource/vpmr.rc)
+    if (MINGW)
+        target_compile_options(${PROJECT_NAME} PRIVATE "-Wa,-mbig-obj")
+        target_compile_options(_pyvpmr PRIVATE "-Wa,-mbig-obj")
+    endif ()
+endif ()

pyvpmr-240916/Dockerfile

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+FROM ubuntu:22.04 as build
+
+RUN apt-get update -y && apt-get install -y cmake git g++ libtbb-dev libmpfr-dev libgmp-dev
+
+RUN git clone --depth 1 https://github.com/TLCFEM/vpmr.git
+
+WORKDIR /vpmr
+
+RUN git submodule update --init --recursive
+RUN cd eigen && git apply ../patch_size.patch && cd ..
+RUN sed -i 's/3.24/3.13/g' CMakeLists.txt
+RUN mkdir build && cd build && cmake -DCMAKE_BUILD_TYPE=Release .. && make
+
+FROM ubuntu:22.04 as runtime
+
+RUN apt-get update -y && apt-get install -y libtbb12 libmpfr6 libgmp10 && apt-get clean -y
+
+COPY --from=build /vpmr/build/vpmr /usr/local/bin/vpmr
+
+RUN vpmr -h
+
+ENTRYPOINT ["vpmr"]