python-katlas 0.0.2__tar.gz → 0.0.4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (23) hide show
  1. {python-katlas-0.0.2/python_katlas.egg-info → python-katlas-0.0.4}/PKG-INFO +1 -1
  2. python-katlas-0.0.4/katlas/__init__.py +1 -0
  3. {python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/_modidx.py +2 -2
  4. {python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/core.py +1 -1
  5. {python-katlas-0.0.2 → python-katlas-0.0.4/python_katlas.egg-info}/PKG-INFO +1 -1
  6. {python-katlas-0.0.2 → python-katlas-0.0.4}/python_katlas.egg-info/requires.txt +10 -7
  7. {python-katlas-0.0.2 → python-katlas-0.0.4}/settings.ini +4 -4
  8. python-katlas-0.0.2/katlas/__init__.py +0 -1
  9. {python-katlas-0.0.2 → python-katlas-0.0.4}/LICENSE +0 -0
  10. {python-katlas-0.0.2 → python-katlas-0.0.4}/MANIFEST.in +0 -0
  11. {python-katlas-0.0.2 → python-katlas-0.0.4}/README.md +0 -0
  12. {python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/dl.py +0 -0
  13. {python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/feature.py +0 -0
  14. {python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/imports.py +0 -0
  15. {python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/plot.py +0 -0
  16. {python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/train.py +0 -0
  17. {python-katlas-0.0.2 → python-katlas-0.0.4}/python_katlas.egg-info/SOURCES.txt +0 -0
  18. {python-katlas-0.0.2 → python-katlas-0.0.4}/python_katlas.egg-info/dependency_links.txt +0 -0
  19. {python-katlas-0.0.2 → python-katlas-0.0.4}/python_katlas.egg-info/entry_points.txt +0 -0
  20. {python-katlas-0.0.2 → python-katlas-0.0.4}/python_katlas.egg-info/not-zip-safe +0 -0
  21. {python-katlas-0.0.2 → python-katlas-0.0.4}/python_katlas.egg-info/top_level.txt +0 -0
  22. {python-katlas-0.0.2 → python-katlas-0.0.4}/setup.cfg +0 -0
  23. {python-katlas-0.0.2 → python-katlas-0.0.4}/setup.py +0 -0
{python-katlas-0.0.2/python_katlas.egg-info → python-katlas-0.0.4}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: python-katlas
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- Version: 0.0.2
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+ Version: 0.0.4
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  Summary: tools for predicting kinome specificities
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  Home-page: https://github.com/sky1ove/python-katlas
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  Author: lily
python-katlas-0.0.4/katlas/__init__.py ADDED
@@ -0,0 +1 @@
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+ __version__ = "0.0.3"
{python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/_modidx.py RENAMED
@@ -1,9 +1,9 @@
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  # Autogenerated by nbdev
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  d = { 'settings': { 'branch': 'main',
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- 'doc_baseurl': '/katlas',
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+ 'doc_baseurl': '/python-katlas',
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  'doc_host': 'https://sky1ove.github.io',
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- 'git_url': 'https://github.com/sky1ove/katlas',
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+ 'git_url': 'https://github.com/sky1ove/python-katlas',
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  'lib_path': 'katlas'},
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  'syms': { 'katlas.core': { 'katlas.core.CPTAC': ('core.html#cptac', 'katlas/core.py'),
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  'katlas.core.CPTAC._fetch_data': ('core.html#cptac._fetch_data', 'katlas/core.py'),
{python-katlas-0.0.2 → python-katlas-0.0.4}/katlas/core.py RENAMED
@@ -7,7 +7,7 @@ __all__ = ['param_PSPA_st', 'param_PSPA_y', 'param_PSPA', 'param_CDDM', 'param_C
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  'query_gene', 'get_ttest', 'get_metaP', 'raw2norm', 'get_one_kinase']
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  # %% ../nbs/00_core.ipynb 4
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- import math, pandas as pd, numpy as np, seaborn as sns
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+ import math, pandas as pd, numpy as np
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  from tqdm import tqdm
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  from scipy.stats import chi2
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  from typing import Callable
{python-katlas-0.0.2 → python-katlas-0.0.4/python_katlas.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: python-katlas
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- Version: 0.0.2
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+ Version: 0.0.4
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  Summary: tools for predicting kinome specificities
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  Home-page: https://github.com/sky1ove/python-katlas
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  Author: lily
{python-katlas-0.0.2 → python-katlas-0.0.4}/python_katlas.egg-info/requires.txt RENAMED
@@ -1,15 +1,18 @@
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- pandas
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+ statsmodels
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+ fastparquet
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+
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+ [dev]
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+ nbdev
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+ pyngrok
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+ fastai>=2.7.12
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+ fastbook
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+ fairscale
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+ fair-esm
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  logomaker
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  seaborn
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  rdkit
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  umap-learn
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  adjustText
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  bokeh
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- biopython
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  scikit-learn>=1.3.0
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- statsmodels
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  openpyxl
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-
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- [dev]
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- nbdev
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- pyngrok
{python-katlas-0.0.2 → python-katlas-0.0.4}/settings.ini RENAMED
@@ -5,7 +5,7 @@
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  ### Python library ###
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  repo = python-katlas
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  lib_name = %(repo)s
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- version = 0.0.2
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+ version = 0.0.4
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  min_python = 3.7
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  license = apache2
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  black_formatting = False
@@ -38,6 +38,6 @@ status = 3
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  user = sky1ove
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  ### Optional ###
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- requirements = pandas logomaker seaborn rdkit umap-learn adjustText bokeh biopython scikit-learn>=1.3.0 statsmodels openpyxl
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- dev_requirements = nbdev pyngrok
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- # console_scripts =fastai>=2.7.12 fastbook fairscale fair-esm
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+ requirements = statsmodels fastparquet
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+ dev_requirements = nbdev pyngrok fastai>=2.7.12 fastbook fairscale fair-esm logomaker seaborn rdkit umap-learn adjustText bokeh scikit-learn>=1.3.0 openpyxl
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+ # console_scripts =
python-katlas-0.0.2/katlas/__init__.py DELETED
@@ -1 +0,0 @@
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- __version__ = "0.0.1"
{python-katlas-0.0.2 → python-katlas-0.0.4}/LICENSE RENAMED
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{python-katlas-0.0.2 → python-katlas-0.0.4}/MANIFEST.in RENAMED
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{python-katlas-0.0.2 → python-katlas-0.0.4}/README.md RENAMED
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{python-katlas-0.0.2 → python-katlas-0.0.4}/setup.cfg RENAMED
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{python-katlas-0.0.2 → python-katlas-0.0.4}/setup.py RENAMED
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