pytetwild 0.2.1__tar.gz → 0.2.3__tar.gz

{pytetwild-0.2.1 → pytetwild-0.2.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: pytetwild
-Version: 0.2.1
+Version: 0.2.3
 Summary: Python wrapper of fTetWild
 Author-Email: Alex Kaszynski <akascap@gmail.com>
 Classifier: Development Status :: 3 - Alpha
@@ -22,7 +22,7 @@ Requires-Dist: pyvista; extra == "all"
 Provides-Extra: tests
 Requires-Dist: pytest; extra == "tests"
 Requires-Dist: pyvista; extra == "tests"
-Requires-Dist: scipy; extra == "tests"
+Requires-Dist: scipy<1.17.0; extra == "tests"
 Requires-Dist: meshio; extra == "tests"
 Provides-Extra: dev
 Requires-Dist: pre-commit; extra == "dev"

{pytetwild-0.2.1 → pytetwild-0.2.3}/pyproject.toml

@@ -4,7 +4,7 @@ requires = ["scikit-build-core >=0.4.3", "nanobind >=1.3.2"]
 
 [project]
 name = "pytetwild"
-version = "0.2.1"
+version = "0.2.3"
 description = "Python wrapper of fTetWild"
 readme = { file = "README.rst", content-type = "text/x-rst" }
 authors = [{ name = "Alex Kaszynski", email = "akascap@gmail.com" }]
@@ -34,7 +34,7 @@ pytetwild = ["py.typed"]
 
 [project.optional-dependencies]
 all = ['pyvista']
-tests = ["pytest", "pyvista", "scipy", "meshio"]
+tests = ["pytest", "pyvista", "scipy<1.17.0", "meshio"]
 dev = ["pre-commit"]
 
 [tool.scikit-build]
@@ -57,13 +57,13 @@ archs = ["auto64"]  # 64-bit only
 before-build = "pip install abi3audit"
 build = "cp310-* cp311-* cp312-*"  # 3.12+ are abi3 wheels
 skip = ["*musllinux*"]  # disable musl-based wheels
-test-requires = "pytest pyvista scipy meshio"
+test-extras = ["tests"]
 test-command = "pytest {project}/tests -v"
 
 [tool.cibuildwheel.linux]
-manylinux-x86_64-image = "manylinux_2_28"
-before-all = "dnf install -y gmp-devel"
-before-build = "pip install abi3audit cmake==3.29.0"
+manylinux-x86_64-image = "manylinux2014"
+before-all = "yum install -y gmp-devel"
+before-build = "pip install abi3audit cmake"
 repair-wheel-command = [
   "auditwheel repair -w {dest_dir} {wheel}",
   "bash tools/audit_wheel.sh {wheel}"

{pytetwild-0.2.1 → pytetwild-0.2.3}/src/FTetWildWrapper.cpp

@@ -138,7 +138,8 @@ nb::tuple Tetrahedralize(
     int num_opt_iter,
     int loglevel,
     bool quiet,
-    bool vtk_ordering) {
+    bool vtk_ordering,
+    bool disable_filtering) {
     using namespace floatTetWild;
     using namespace Eigen;
     GEO::initialize();
@@ -203,6 +204,7 @@ nb::tuple Tetrahedralize(
     params.coarsen = coarsen;
     params.is_quiet = quiet;
     params.max_its = num_opt_iter;
+    params.disable_filtering = disable_filtering;
 
     if (!params.init(tree.get_sf_diag())) {
         throw std::runtime_error("FTetWildWrapper.cpp: Parameters initialization failed");

{pytetwild-0.2.1 → pytetwild-0.2.3}/src/pytetwild/PyfTetWildWrapper.pyi

@@ -16,6 +16,7 @@ def tetrahedralize_mesh(
     loglevel: int,
     quiet: bool,
     vtk_ordering: bool,
+    disable_filtering: bool,
 ) -> tuple[NDArray[np.float64], NDArray[np.int32]]: ...
 def tetrahedralize_csg(
     csg_file: str,

{pytetwild-0.2.1 → pytetwild-0.2.3}/src/pytetwild/pytetwild.py

@@ -101,6 +101,7 @@ def tetrahedralize_pv(
     num_opt_iter: int = 80,
     loglevel: int = 3,
     quiet: bool = True,
+    disable_filtering: bool = False,
 ) -> "pv.UnstructuredGrid":
     """
     Convert a PyVista surface mesh to a PyVista unstructured grid.
@@ -138,6 +139,9 @@ def tetrahedralize_pv(
         Set log level (0 = most verbose, 6 = minimal output).
     quiet : bool, default: False
         Disable all output. Overrides ``loglevel``.
+    disable_filtering : bool, default: False
+        Disable the filtering of the resulting mesh, and thus keep
+        fTetWilds background mesh.
 
     Returns
     -------
@@ -205,6 +209,7 @@ def tetrahedralize_pv(
         loglevel,
         quiet,
         vtk_ordering,
+        disable_filtering,
     )
     return _ugrid_from_regular_cells(tmesh_v, tmesh_c)
 
@@ -224,6 +229,7 @@ def tetrahedralize(
     loglevel: int = 3,
     quiet: bool = True,
     vtk_ordering: bool = False,
+    disable_filtering: bool = False,
 ) -> tuple[NDArray[np.float64], NDArray[np.int32]]:
     """
     Convert mesh vertices and faces to a tetrahedral mesh.
@@ -264,6 +270,9 @@ def tetrahedralize(
         Disable all output. Overrides ``loglevel``.
     vtk_ordering : bool, default: False
         Reorder the tetrahedral cell indices to match VTK's ordering.
+    disable_filtering : bool, default: False
+        Disable the filtering of the resulting mesh, and thus keep
+        fTetWilds background mesh.
 
     Returns
     -------
@@ -301,6 +310,7 @@ def tetrahedralize(
         loglevel,
         quiet,
         vtk_ordering,
+        disable_filtering,
     )
 
 

{pytetwild-0.2.1 → pytetwild-0.2.3}/tests/test_pytetwild.py

@@ -154,3 +154,17 @@ def test_csg() -> None:
 
     assert np.isclose(exactspherevol, spherevol, rtol=0.02)
     assert np.isclose(exactboxvol, boxvol, rtol=0.02)
+
+
+def test_disable_filtering() -> None:
+    # test that the volume of a Unitbox is 1, and larger than 1.1 if the background is kept
+
+    box = pv.Box(bounds=(0, 1, 0, 1, 0, 1)).triangulate()
+    mesh_with_background = tetrahedralize_pv(box, disable_filtering=True)
+    mesh_wo_background = tetrahedralize_pv(box, disable_filtering=False)
+
+    vol_with_background = abs(mesh_with_background.compute_cell_sizes()["Volume"]).sum()
+    vol_wo_background = abs(mesh_wo_background.compute_cell_sizes()["Volume"]).sum()
+
+    assert np.isclose(vol_wo_background, 1.0, rtol=0.01)
+    assert vol_with_background > 1.1