pyscf 2.7.0__tar.gz → 2.9.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1237) hide show
  1. pyscf-2.9.0/CHANGELOG +1549 -0
  2. pyscf-2.9.0/NOTICE +135 -0
  3. pyscf-2.9.0/PKG-INFO +144 -0
  4. pyscf-2.9.0/README.md +72 -0
  5. pyscf-2.9.0/pyproject.toml +70 -0
  6. pyscf-2.9.0/pyscf/__init__.py +114 -0
  7. pyscf-2.9.0/pyscf/ao2mo/__init__.py +490 -0
  8. pyscf-2.9.0/pyscf/ao2mo/_ao2mo.py +314 -0
  9. pyscf-2.9.0/pyscf/ao2mo/incore.py +283 -0
  10. pyscf-2.9.0/pyscf/ao2mo/nrr_outcore.py +389 -0
  11. pyscf-2.9.0/pyscf/ao2mo/outcore.py +825 -0
  12. pyscf-2.9.0/pyscf/ao2mo/r_outcore.py +311 -0
  13. pyscf-2.9.0/pyscf/cc/__init__.py +235 -0
  14. pyscf-2.9.0/pyscf/cc/ccsd.py +1741 -0
  15. pyscf-2.9.0/pyscf/cc/ccsd_rdm.py +510 -0
  16. pyscf-2.9.0/pyscf/cc/dfccsd.py +245 -0
  17. pyscf-2.9.0/pyscf/cc/dfuccsd.py +310 -0
  18. pyscf-2.9.0/pyscf/cc/gccsd.py +550 -0
  19. pyscf-2.9.0/pyscf/cc/rccsd.py +432 -0
  20. pyscf-2.9.0/pyscf/cc/uccsd.py +1395 -0
  21. pyscf-2.9.0/pyscf/cc/uccsd_rdm.py +707 -0
  22. pyscf-2.9.0/pyscf/df/addons.py +265 -0
  23. pyscf-2.9.0/pyscf/df/autoaux.py +195 -0
  24. pyscf-2.9.0/pyscf/df/df_jk.py +606 -0
  25. pyscf-2.9.0/pyscf/df/grad/rhf.py +558 -0
  26. pyscf-2.9.0/pyscf/df/hessian/uhf.py +555 -0
  27. pyscf-2.9.0/pyscf/df/incore.py +341 -0
  28. pyscf-2.9.0/pyscf/df/outcore.py +341 -0
  29. pyscf-2.9.0/pyscf/dft/gks.py +209 -0
  30. pyscf-2.9.0/pyscf/dft/libxc.py +1228 -0
  31. pyscf-2.9.0/pyscf/dft/numint.py +2923 -0
  32. pyscf-2.9.0/pyscf/dft/radi.py +199 -0
  33. pyscf-2.9.0/pyscf/dft/rks.py +569 -0
  34. pyscf-2.9.0/pyscf/dft/roks.py +96 -0
  35. pyscf-2.9.0/pyscf/dft/uks.py +209 -0
  36. pyscf-2.9.0/pyscf/fci/direct_spin1.py +1027 -0
  37. pyscf-2.9.0/pyscf/fci/fci_dhf_slow.py +264 -0
  38. pyscf-2.9.0/pyscf/grad/ccsd.py +459 -0
  39. pyscf-2.9.0/pyscf/grad/ccsd_slow.py +325 -0
  40. pyscf-2.9.0/pyscf/grad/mp2.py +326 -0
  41. pyscf-2.9.0/pyscf/grad/sacasscf.py +884 -0
  42. pyscf-2.9.0/pyscf/grad/uccsd.py +492 -0
  43. pyscf-2.9.0/pyscf/grad/ump2.py +290 -0
  44. pyscf-2.9.0/pyscf/gto/basis/__init__.py +775 -0
  45. pyscf-2.9.0/pyscf/gto/basis/def2-mtzvp.dat +4719 -0
  46. pyscf-2.9.0/pyscf/gto/basis/def2-mtzvpp.dat +4739 -0
  47. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_2zp.py +6492 -0
  48. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_3zp.py +8343 -0
  49. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_4zp.py +10055 -0
  50. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_aae2z.py +1818 -0
  51. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_aae3z.py +2521 -0
  52. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_aae4z.py +3351 -0
  53. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_acv2z.py +1790 -0
  54. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_acv3z.py +2417 -0
  55. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_acv4z.py +3085 -0
  56. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_ae2z.py +6619 -0
  57. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_ae3z.py +9027 -0
  58. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_ae4z.py +11839 -0
  59. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_av2z.py +1742 -0
  60. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_av3z.py +2318 -0
  61. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_av4z.py +2905 -0
  62. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_cv2z.py +6558 -0
  63. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_cv3z.py +8767 -0
  64. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_cv4z.py +11098 -0
  65. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_v2z.py +6472 -0
  66. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_v3z.py +8539 -0
  67. pyscf-2.9.0/pyscf/gto/basis/dyall-basis/dyall_v4z.py +10658 -0
  68. pyscf-2.9.0/pyscf/gto/basis/ma-def2-qzvp.dat +5959 -0
  69. pyscf-2.9.0/pyscf/gto/basis/ma-def2-qzvpp.dat +6195 -0
  70. pyscf-2.9.0/pyscf/gto/basis/ma-def2-svp.dat +3504 -0
  71. pyscf-2.9.0/pyscf/gto/basis/ma-def2-svpp.dat +3504 -0
  72. pyscf-2.9.0/pyscf/gto/basis/ma-def2-tzvp.dat +4347 -0
  73. pyscf-2.9.0/pyscf/gto/basis/ma-def2-tzvpp.dat +4549 -0
  74. pyscf-2.9.0/pyscf/gto/basis/parse_cp2k.py +130 -0
  75. pyscf-2.9.0/pyscf/gto/basis/parse_nwchem.py +321 -0
  76. pyscf-2.9.0/pyscf/gto/eval_gto.py +246 -0
  77. pyscf-2.9.0/pyscf/gto/ft_ao.py +205 -0
  78. pyscf-2.9.0/pyscf/gto/mole.py +4173 -0
  79. pyscf-2.9.0/pyscf/gto/moleintor.py +889 -0
  80. pyscf-2.9.0/pyscf/gw/rpa.py +323 -0
  81. pyscf-2.9.0/pyscf/gw/urpa.py +183 -0
  82. pyscf-2.9.0/pyscf/hessian/uks.py +747 -0
  83. pyscf-2.9.0/pyscf/lib/CMakeLists.txt +293 -0
  84. pyscf-2.9.0/pyscf/lib/config.h.in +8 -0
  85. pyscf-2.9.0/pyscf/lib/dft/libxc_itrf.c +1173 -0
  86. pyscf-2.9.0/pyscf/lib/dft/nr_numint_sparse.c +1135 -0
  87. pyscf-2.9.0/pyscf/lib/diis.py +342 -0
  88. pyscf-2.9.0/pyscf/lib/exceptions.py +28 -0
  89. pyscf-2.9.0/pyscf/lib/linalg_helper.py +1549 -0
  90. pyscf-2.9.0/pyscf/lib/logger.py +240 -0
  91. pyscf-2.9.0/pyscf/lib/mcscf/fci_contract.c +1034 -0
  92. pyscf-2.9.0/pyscf/lib/misc.py +1553 -0
  93. pyscf-2.9.0/pyscf/lib/mp/CMakeLists.txt +22 -0
  94. pyscf-2.9.0/pyscf/lib/mp/mp2.c +518 -0
  95. pyscf-2.9.0/pyscf/lib/mp/mp2.h +44 -0
  96. pyscf-2.9.0/pyscf/lib/np_helper/CMakeLists.txt +21 -0
  97. pyscf-2.9.0/pyscf/lib/np_helper/imatcopy.c +360 -0
  98. pyscf-2.9.0/pyscf/lib/np_helper/np_helper.c +143 -0
  99. pyscf-2.9.0/pyscf/lib/np_helper/np_helper.h +96 -0
  100. pyscf-2.9.0/pyscf/lib/numpy_helper.py +1602 -0
  101. pyscf-2.9.0/pyscf/lib/pbc/nr_direct.c +1230 -0
  102. pyscf-2.9.0/pyscf/lib/vhf/fblas.h +95 -0
  103. pyscf-2.9.0/pyscf/lib/vhf/nr_sr_vhf.c +1000 -0
  104. pyscf-2.9.0/pyscf/lib/vhf/rkb_screen.c +492 -0
  105. pyscf-2.9.0/pyscf/mcscf/__init__.py +308 -0
  106. pyscf-2.9.0/pyscf/mcscf/casci.py +1184 -0
  107. pyscf-2.9.0/pyscf/mcscf/chkfile.py +102 -0
  108. pyscf-2.9.0/pyscf/mcscf/mc1step.py +1459 -0
  109. pyscf-2.9.0/pyscf/mcscf/newton_casscf.py +952 -0
  110. pyscf-2.9.0/pyscf/mcscf/umc1step.py +918 -0
  111. pyscf-2.9.0/pyscf/mp/__init__.py +76 -0
  112. pyscf-2.9.0/pyscf/mp/dfmp2.py +627 -0
  113. pyscf-2.9.0/pyscf/mp/dfmp2_native.py +799 -0
  114. pyscf-2.9.0/pyscf/mp/dfmp2_slow.py +133 -0
  115. pyscf-2.9.0/pyscf/mp/dfump2.py +672 -0
  116. pyscf-2.9.0/pyscf/mp/dfump2_native.py +665 -0
  117. pyscf-2.9.0/pyscf/mp/dfump2_slow.py +161 -0
  118. pyscf-2.9.0/pyscf/mp/gmp2.py +379 -0
  119. pyscf-2.9.0/pyscf/mp/mp2.py +925 -0
  120. pyscf-2.9.0/pyscf/mp/ump2.py +793 -0
  121. pyscf-2.9.0/pyscf/mrpt/nevpt2.py +1119 -0
  122. pyscf-2.9.0/pyscf/pbc/df/aft.py +734 -0
  123. pyscf-2.9.0/pyscf/pbc/df/df.py +951 -0
  124. pyscf-2.9.0/pyscf/pbc/df/df_jk.py +1523 -0
  125. pyscf-2.9.0/pyscf/pbc/df/fft.py +366 -0
  126. pyscf-2.9.0/pyscf/pbc/df/fft_jk.py +519 -0
  127. pyscf-2.9.0/pyscf/pbc/df/incore.py +717 -0
  128. pyscf-2.9.0/pyscf/pbc/df/mdf_jk.py +149 -0
  129. pyscf-2.9.0/pyscf/pbc/df/outcore.py +250 -0
  130. pyscf-2.9.0/pyscf/pbc/df/rsdf.py +676 -0
  131. pyscf-2.9.0/pyscf/pbc/df/rsdf_builder.py +1618 -0
  132. pyscf-2.9.0/pyscf/pbc/df/rsdf_helper.py +1348 -0
  133. pyscf-2.9.0/pyscf/pbc/df/rsdf_jk.py +53 -0
  134. pyscf-2.9.0/pyscf/pbc/dft/gen_grid.py +287 -0
  135. pyscf-2.9.0/pyscf/pbc/dft/gks.py +158 -0
  136. pyscf-2.9.0/pyscf/pbc/dft/kgks.py +173 -0
  137. pyscf-2.9.0/pyscf/pbc/dft/krks.py +211 -0
  138. pyscf-2.9.0/pyscf/pbc/dft/krks_ksymm.py +201 -0
  139. pyscf-2.9.0/pyscf/pbc/dft/krkspu.py +282 -0
  140. pyscf-2.9.0/pyscf/pbc/dft/krkspu_ksymm.py +40 -0
  141. pyscf-2.9.0/pyscf/pbc/dft/kuks.py +186 -0
  142. pyscf-2.9.0/pyscf/pbc/dft/kuks_ksymm.py +198 -0
  143. pyscf-2.9.0/pyscf/pbc/dft/kukspu.py +174 -0
  144. pyscf-2.9.0/pyscf/pbc/dft/kukspu_ksymm.py +40 -0
  145. pyscf-2.9.0/pyscf/pbc/dft/multigrid/multigrid.py +1918 -0
  146. pyscf-2.9.0/pyscf/pbc/dft/multigrid/multigrid_pair.py +1410 -0
  147. pyscf-2.9.0/pyscf/pbc/dft/numint.py +1319 -0
  148. pyscf-2.9.0/pyscf/pbc/dft/rks.py +360 -0
  149. pyscf-2.9.0/pyscf/pbc/dft/uks.py +182 -0
  150. pyscf-2.9.0/pyscf/pbc/gto/_pbcintor.py +67 -0
  151. pyscf-2.9.0/pyscf/pbc/gto/cell.py +1939 -0
  152. pyscf-2.9.0/pyscf/pbc/gto/eval_gto.py +253 -0
  153. pyscf-2.9.0/pyscf/pbc/gto/neighborlist.py +202 -0
  154. pyscf-2.9.0/pyscf/pbc/mpitools/mpi.py +308 -0
  155. pyscf-2.9.0/pyscf/pbc/scf/_response_functions.py +495 -0
  156. pyscf-2.9.0/pyscf/pbc/scf/hf.py +942 -0
  157. pyscf-2.9.0/pyscf/pbc/scf/khf.py +831 -0
  158. pyscf-2.9.0/pyscf/pbc/scf/khf_ksymm.py +383 -0
  159. pyscf-2.9.0/pyscf/pbc/scf/kuhf.py +609 -0
  160. pyscf-2.9.0/pyscf/pbc/scf/kuhf_ksymm.py +219 -0
  161. pyscf-2.9.0/pyscf/pbc/scf/rsjk.py +1354 -0
  162. pyscf-2.9.0/pyscf/pbc/scf/stability.py +329 -0
  163. pyscf-2.9.0/pyscf/pbc/tdscf/krhf.py +536 -0
  164. pyscf-2.9.0/pyscf/pbc/tdscf/kuhf.py +538 -0
  165. pyscf-2.9.0/pyscf/pbc/tdscf/rhf.py +198 -0
  166. pyscf-2.9.0/pyscf/pbc/tdscf/uhf.py +264 -0
  167. pyscf-2.9.0/pyscf/pbc/tools/k2gamma.py +352 -0
  168. pyscf-2.9.0/pyscf/pbc/tools/lattice.py +171 -0
  169. pyscf-2.9.0/pyscf/pbc/tools/pbc.py +777 -0
  170. pyscf-2.9.0/pyscf/pbc/x2c/sfx2c1e.py +355 -0
  171. pyscf-2.9.0/pyscf/scf/_response_functions.py +340 -0
  172. pyscf-2.9.0/pyscf/scf/_vhf.py +847 -0
  173. pyscf-2.9.0/pyscf/scf/addons.py +1254 -0
  174. pyscf-2.9.0/pyscf/scf/dhf.py +1110 -0
  175. pyscf-2.9.0/pyscf/scf/dispersion.py +178 -0
  176. pyscf-2.9.0/pyscf/scf/hf.py +2480 -0
  177. pyscf-2.9.0/pyscf/scf/uhf.py +1135 -0
  178. pyscf-2.9.0/pyscf/solvent/__init__.py +169 -0
  179. pyscf-2.9.0/pyscf/solvent/_attach_solvent.py +680 -0
  180. pyscf-2.9.0/pyscf/solvent/cosmors.py +378 -0
  181. pyscf-2.9.0/pyscf/solvent/grad/pcm.py +440 -0
  182. pyscf-2.9.0/pyscf/solvent/hessian/__init__.py +0 -0
  183. pyscf-2.9.0/pyscf/solvent/hessian/pcm.py +1079 -0
  184. pyscf-2.9.0/pyscf/solvent/hessian/smd.py +135 -0
  185. pyscf-2.9.0/pyscf/solvent/pcm.py +488 -0
  186. pyscf-2.9.0/pyscf/solvent/smd.py +435 -0
  187. pyscf-2.9.0/pyscf/soscf/ciah.py +308 -0
  188. pyscf-2.9.0/pyscf/soscf/newton_ah.py +1073 -0
  189. pyscf-2.9.0/pyscf/symm/geom.py +947 -0
  190. pyscf-2.9.0/pyscf/tdscf/_lr_eig.py +1009 -0
  191. pyscf-2.9.0/pyscf/tdscf/dhf.py +590 -0
  192. pyscf-2.9.0/pyscf/tdscf/ghf.py +617 -0
  193. pyscf-2.9.0/pyscf/tdscf/gks.py +184 -0
  194. pyscf-2.9.0/pyscf/tdscf/rhf.py +1110 -0
  195. pyscf-2.9.0/pyscf/tdscf/rks.py +222 -0
  196. pyscf-2.9.0/pyscf/tdscf/uhf.py +918 -0
  197. pyscf-2.9.0/pyscf/tdscf/uks.py +242 -0
  198. pyscf-2.9.0/pyscf/tools/fcidump.py +422 -0
  199. pyscf-2.9.0/pyscf/tools/finite_diff.py +175 -0
  200. pyscf-2.9.0/pyscf/tools/qcschema.py +265 -0
  201. pyscf-2.9.0/pyscf/x2c/tdscf.py +329 -0
  202. pyscf-2.9.0/pyscf/x2c/x2c.py +1082 -0
  203. pyscf-2.9.0/pyscf.egg-info/PKG-INFO +144 -0
  204. pyscf-2.9.0/pyscf.egg-info/SOURCES.txt +1060 -0
  205. pyscf-2.9.0/pyscf.egg-info/requires.txt +57 -0
  206. pyscf-2.7.0/CHANGELOG +0 -1492
  207. pyscf-2.7.0/NOTICE +0 -122
  208. pyscf-2.7.0/PKG-INFO +0 -140
  209. pyscf-2.7.0/README.md +0 -71
  210. pyscf-2.7.0/pyproject.toml +0 -69
  211. pyscf-2.7.0/pyscf/__init__.py +0 -114
  212. pyscf-2.7.0/pyscf/ao2mo/__init__.py +0 -479
  213. pyscf-2.7.0/pyscf/ao2mo/_ao2mo.py +0 -305
  214. pyscf-2.7.0/pyscf/ao2mo/incore.py +0 -280
  215. pyscf-2.7.0/pyscf/ao2mo/nrr_outcore.py +0 -389
  216. pyscf-2.7.0/pyscf/ao2mo/outcore.py +0 -825
  217. pyscf-2.7.0/pyscf/ao2mo/r_outcore.py +0 -311
  218. pyscf-2.7.0/pyscf/cc/__init__.py +0 -236
  219. pyscf-2.7.0/pyscf/cc/ccsd.py +0 -1733
  220. pyscf-2.7.0/pyscf/cc/ccsd_rdm.py +0 -505
  221. pyscf-2.7.0/pyscf/cc/dfccsd.py +0 -245
  222. pyscf-2.7.0/pyscf/cc/gccsd.py +0 -550
  223. pyscf-2.7.0/pyscf/cc/rccsd.py +0 -428
  224. pyscf-2.7.0/pyscf/cc/uccsd.py +0 -1386
  225. pyscf-2.7.0/pyscf/cc/uccsd_rdm.py +0 -707
  226. pyscf-2.7.0/pyscf/df/addons.py +0 -260
  227. pyscf-2.7.0/pyscf/df/autoaux.py +0 -191
  228. pyscf-2.7.0/pyscf/df/df_jk.py +0 -575
  229. pyscf-2.7.0/pyscf/df/grad/rhf.py +0 -528
  230. pyscf-2.7.0/pyscf/df/hessian/uhf.py +0 -555
  231. pyscf-2.7.0/pyscf/df/incore.py +0 -341
  232. pyscf-2.7.0/pyscf/df/outcore.py +0 -341
  233. pyscf-2.7.0/pyscf/dft/gks.py +0 -205
  234. pyscf-2.7.0/pyscf/dft/libxc.py +0 -1208
  235. pyscf-2.7.0/pyscf/dft/numint.py +0 -2906
  236. pyscf-2.7.0/pyscf/dft/radi.py +0 -192
  237. pyscf-2.7.0/pyscf/dft/rks.py +0 -565
  238. pyscf-2.7.0/pyscf/dft/roks.py +0 -90
  239. pyscf-2.7.0/pyscf/dft/uks.py +0 -200
  240. pyscf-2.7.0/pyscf/fci/direct_spin1.py +0 -1028
  241. pyscf-2.7.0/pyscf/fci/fci_dhf_slow.py +0 -250
  242. pyscf-2.7.0/pyscf/grad/ccsd.py +0 -463
  243. pyscf-2.7.0/pyscf/grad/ccsd_slow.py +0 -326
  244. pyscf-2.7.0/pyscf/grad/mp2.py +0 -317
  245. pyscf-2.7.0/pyscf/grad/sacasscf.py +0 -882
  246. pyscf-2.7.0/pyscf/grad/uccsd.py +0 -496
  247. pyscf-2.7.0/pyscf/grad/ump2.py +0 -292
  248. pyscf-2.7.0/pyscf/gto/basis/__init__.py +0 -748
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  389. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/adc/radc_ao2mo.py +0 -0
  390. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/adc/radc_ea.py +0 -0
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  393. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/adc/uadc.py +0 -0
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  395. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/adc/uadc_ao2mo.py +0 -0
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  398. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/adc/uadc_ip_cvs.py +0 -0
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  402. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/agf2/chempot.py +0 -0
  403. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/agf2/chkfile.py +0 -0
  404. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/agf2/dfragf2.py +0 -0
  405. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/agf2/dfuagf2.py +0 -0
  406. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/agf2/mpi_helper.py +0 -0
  407. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/agf2/ragf2.py +0 -0
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  409. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/agf2/uagf2.py +0 -0
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  411. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/ao2mo/addons.py +0 -0
  412. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/ao2mo/semi_incore.py +0 -0
  413. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/_ccsd.py +0 -0
  414. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/addons.py +0 -0
  415. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/bccd.py +0 -0
  416. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/ccd.py +0 -0
  417. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/ccsd_lambda.py +0 -0
  418. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/ccsd_rdm_slow.py +0 -0
  419. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/ccsd_t.py +0 -0
  420. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/ccsd_t_lambda_slow.py +0 -0
  421. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/ccsd_t_rdm_slow.py +0 -0
  422. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/ccsd_t_slow.py +0 -0
  423. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/eom_gccsd.py +0 -0
  424. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/eom_rccsd.py +0 -0
  425. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/eom_uccsd.py +0 -0
  426. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/gccsd_lambda.py +0 -0
  427. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/gccsd_rdm.py +0 -0
  428. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/gccsd_t.py +0 -0
  429. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/gccsd_t_lambda.py +0 -0
  430. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/gccsd_t_rdm.py +0 -0
  431. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/gccsd_t_slow.py +0 -0
  432. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/gintermediates.py +0 -0
  433. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/momgfccsd.py +0 -0
  434. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/qcisd.py +0 -0
  435. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/qcisd_slow.py +0 -0
  436. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/qcisd_t.py +0 -0
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  438. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/rccsd_lambda.py +0 -0
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  440. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/rintermediates.py +0 -0
  441. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uccsd_lambda.py +0 -0
  442. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uccsd_slow.py +0 -0
  443. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uccsd_t.py +0 -0
  444. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uccsd_t_lambda.py +0 -0
  445. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uccsd_t_rdm.py +0 -0
  446. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uccsd_t_slow.py +0 -0
  447. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uintermediates.py +0 -0
  448. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/cc/uintermediates_slow.py +0 -0
  449. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/ci/__init__.py +0 -0
  450. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/ci/addons.py +0 -0
  451. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/ci/cisd.py +0 -0
  452. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/ci/gcisd.py +0 -0
  453. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/ci/ucisd.py +0 -0
  454. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/__init__.py +0 -0
  455. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/elements.py +0 -0
  456. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/gyro.py +0 -0
  457. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/gyromagnetic_ratio.dat +0 -0
  458. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/nist.py +0 -0
  459. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/nuclear_g_factor.dat +0 -0
  460. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/nucprop.py +0 -0
  461. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/radii.py +0 -0
  462. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/data/solvents.dat +0 -0
  463. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/__init__.py +0 -0
  464. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/df.py +0 -0
  465. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/__init__.py +0 -0
  466. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/casdm2_util.py +0 -0
  467. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/casscf.py +0 -0
  468. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/rks.py +0 -0
  469. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/rohf.py +0 -0
  470. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/roks.py +0 -0
  471. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/sacasscf.py +0 -0
  472. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/uhf.py +0 -0
  473. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/grad/uks.py +0 -0
  474. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/hessian/__init__.py +0 -0
  475. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/hessian/rhf.py +0 -0
  476. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/hessian/rks.py +0 -0
  477. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/hessian/uks.py +0 -0
  478. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/df/r_incore.py +0 -0
  479. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/LebedevGrid.py +0 -0
  480. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/__init__.py +0 -0
  481. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/dft_parser.py +0 -0
  482. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/dks.py +0 -0
  483. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/gen_grid.py +0 -0
  484. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/gks_symm.py +0 -0
  485. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/numint2c.py +0 -0
  486. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/r_numint.py +0 -0
  487. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/rks_symm.py +0 -0
  488. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/sap.py +0 -0
  489. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/sap_data.py +0 -0
  490. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/uks_symm.py +0 -0
  491. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/xc/__init__.py +0 -0
  492. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/xc/utils.py +0 -0
  493. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/xc_deriv.py +0 -0
  494. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/dft/xcfun.py +0 -0
  495. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/eph/__init__.py +0 -0
  496. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/eph/eph_fd.py +0 -0
  497. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/eph/rhf.py +0 -0
  498. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/eph/rks.py +0 -0
  499. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/eph/uhf.py +0 -0
  500. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/eph/uks.py +0 -0
  501. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/__init__.py +0 -0
  502. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/addons.py +0 -0
  503. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/cistring.py +0 -0
  504. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/direct_ep.py +0 -0
  505. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/direct_nosym.py +0 -0
  506. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/direct_spin0.py +0 -0
  507. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/direct_spin0_symm.py +0 -0
  508. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/direct_spin1_cyl_sym.py +0 -0
  509. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/direct_spin1_symm.py +0 -0
  510. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/direct_uhf.py +0 -0
  511. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/fci_slow.py +0 -0
  512. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/rdm.py +0 -0
  513. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/selected_ci.py +0 -0
  514. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/selected_ci_slow.py +0 -0
  515. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/selected_ci_spin0.py +0 -0
  516. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/selected_ci_spin0_symm.py +0 -0
  517. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/selected_ci_symm.py +0 -0
  518. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/fci/spin_op.py +0 -0
  519. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/geomopt/__init__.py +0 -0
  520. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/geomopt/addons.py +0 -0
  521. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/geomopt/berny_solver.py +0 -0
  522. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/geomopt/geometric_solver.py +0 -0
  523. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/geomopt/log.ini +0 -0
  524. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/__init__.py +0 -0
  525. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/casci.py +0 -0
  526. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/casscf.py +0 -0
  527. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/ccsd_t.py +0 -0
  528. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/cisd.py +0 -0
  529. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/dhf.py +0 -0
  530. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/dispersion.py +0 -0
  531. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/lagrange.py +0 -0
  532. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/rhf.py +0 -0
  533. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/rks.py +0 -0
  534. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/rohf.py +0 -0
  535. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/roks.py +0 -0
  536. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/tdrhf.py +0 -0
  537. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/tdrks.py +0 -0
  538. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/tduhf.py +0 -0
  539. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/tduks.py +0 -0
  540. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/uccsd_t.py +0 -0
  541. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/ucisd.py +0 -0
  542. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/uhf.py +0 -0
  543. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/grad/uks.py +0 -0
  544. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/__init__.py +0 -0
  545. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/Burkatzi-Filippi-Dolg-PP.dat +0 -0
  546. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/DgaussA1_dft_cfit.dat +0 -0
  547. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/DgaussA1_dft_xfit.dat +0 -0
  548. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/DgaussA2_dft_cfit.dat +0 -0
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  552. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ano.dat +0 -0
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  557. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/aug-cc-pVDZ-PP.dat +0 -0
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  563. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/aug-cc-pv5z-dk.dat +0 -0
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  644. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCV5Z.dat +0 -0
  645. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVDZ-DK.dat +0 -0
  646. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVDZ-PP.dat +0 -0
  647. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVDZ.dat +0 -0
  648. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVQZ-DK.dat +0 -0
  649. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVQZ-DK3.dat +0 -0
  650. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVQZ-PP.dat +0 -0
  651. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVQZ.dat +0 -0
  652. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVTZ-DK.dat +0 -0
  653. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVTZ-DK3.dat +0 -0
  654. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVTZ-PP.dat +0 -0
  655. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVTZ.dat +0 -0
  656. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/cc-pwCVTZ_MP2FIT.dat +0 -0
  657. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP.dat +0 -0
  658. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_aug-cc-pV5Z.dat +0 -0
  659. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_aug-cc-pV6Z.dat +0 -0
  660. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_aug-cc-pVDZ.dat +0 -0
  661. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_aug-cc-pVQZ.dat +0 -0
  662. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_aug-cc-pVTZ.dat +0 -0
  663. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_cc-pV5Z.dat +0 -0
  664. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_cc-pV6Z.dat +0 -0
  665. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_cc-pVDZ.dat +0 -0
  666. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_cc-pVQZ.dat +0 -0
  667. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP/ccECP_cc-pVTZ.dat +0 -0
  668. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP.dat +0 -0
  669. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_aug-cc-pV5Z.dat +0 -0
  670. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_aug-cc-pV6Z.dat +0 -0
  671. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_aug-cc-pVDZ.dat +0 -0
  672. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_aug-cc-pVQZ.dat +0 -0
  673. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_aug-cc-pVTZ.dat +0 -0
  674. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_cc-pV5Z.dat +0 -0
  675. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_cc-pV6Z.dat +0 -0
  676. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_cc-pVDZ.dat +0 -0
  677. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_cc-pVQZ.dat +0 -0
  678. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_He_core/ccECP_cc-pVTZ.dat +0 -0
  679. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP.dat +0 -0
  680. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_aug-cc-pV5Z.dat +0 -0
  681. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_aug-cc-pVDZ.dat +0 -0
  682. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_aug-cc-pVQZ.dat +0 -0
  683. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_aug-cc-pVTZ.dat +0 -0
  684. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_cc-pV5Z.dat +0 -0
  685. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_cc-pVDZ.dat +0 -0
  686. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_cc-pVQZ.dat +0 -0
  687. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/ccecp-basis/ccECP_reg/ccECP_cc-pVTZ.dat +0 -0
  688. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/crenbl.dat +0 -0
  689. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/crenbs.dat +0 -0
  690. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/crystal-cc-pvdz.dat +0 -0
  691. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-qzvp-ri.dat +0 -0
  692. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-qzvp.dat +0 -0
  693. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-qzvpd.dat +0 -0
  694. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-qzvpp-ri.dat +0 -0
  695. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-qzvpp.dat +0 -0
  696. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-qzvppd-ri.dat +0 -0
  697. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-qzvppd.dat +0 -0
  698. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-svp-ri.dat +0 -0
  699. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-svp.dat +0 -0
  700. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-svpd-ri.dat +0 -0
  701. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-svpd.dat +0 -0
  702. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvp-ri.dat +0 -0
  703. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvp.dat +0 -0
  704. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvpd-ri.dat +0 -0
  705. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvpd.dat +0 -0
  706. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvpp-ri.dat +0 -0
  707. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvpp.dat +0 -0
  708. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvppd-ri.dat +0 -0
  709. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-tzvppd.dat +0 -0
  710. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-universal-jfit.dat +0 -0
  711. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/def2-universal-jkfit.dat +0 -0
  712. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/demon_cfit.dat +0 -0
  713. {pyscf-2.7.0/pyscf/pbc/eph → pyscf-2.9.0/pyscf/gto/basis/dyall-basis}/__init__.py +0 -0
  714. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dyall_dz.py +0 -0
  715. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dyall_qz.py +0 -0
  716. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dyall_tz.py +0 -0
  717. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dz.dat +0 -0
  718. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dzp-dkh.dat +0 -0
  719. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dzp.dat +0 -0
  720. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dzp_dunning.py +0 -0
  721. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dzvp.dat +0 -0
  722. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/dzvp2.dat +0 -0
  723. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/aug-cc-pV5Z-OptRI.dat +0 -0
  724. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/aug-cc-pVDZ-OptRI.dat +0 -0
  725. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/aug-cc-pVQZ-OptRI.dat +0 -0
  726. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/aug-cc-pVTZ-OptRI.dat +0 -0
  727. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pCVDZ-F12-OptRI.dat +0 -0
  728. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pCVQZ-F12-OptRI.dat +0 -0
  729. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pCVTZ-F12-OptRI.dat +0 -0
  730. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pV5Z-F12.dat +0 -0
  731. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pV5Z-F12rev2.dat +0 -0
  732. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVDZ-F12-OptRI.dat +0 -0
  733. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVDZ-F12-nZ.dat +0 -0
  734. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVDZ-F12rev2.dat +0 -0
  735. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVQZ-F12-OptRI.dat +0 -0
  736. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVQZ-F12-nZ.dat +0 -0
  737. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVQZ-F12rev2.dat +0 -0
  738. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVTZ-F12-OptRI.dat +0 -0
  739. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVTZ-F12-nZ.dat +0 -0
  740. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/f12-basis/cc-pVTZ-F12rev2.dat +0 -0
  741. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/faegre_dz.py +0 -0
  742. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/heavy-aug-cc-pvdz-jkfit.dat +0 -0
  743. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/heavy-aug-cc-pvdz-ri.dat +0 -0
  744. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/heavy-aug-cc-pvtz-jkfit.dat +0 -0
  745. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/heavy-aug-cc-pvtz-ri.dat +0 -0
  746. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/iglo3.py +0 -0
  747. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/lanl08.dat +0 -0
  748. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/lanl2dz.dat +0 -0
  749. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/lanl2tz.dat +0 -0
  750. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/minao.py +0 -0
  751. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/parse_bfd_pp.py +0 -0
  752. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/parse_cp2k_pp.py +0 -0
  753. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/parse_gaussian.py +0 -0
  754. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/parse_molpro.py +0 -0
  755. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/parse_nwchem_ecp.py +0 -0
  756. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pc-0.dat +0 -0
  757. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pc-1.dat +0 -0
  758. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pc-2.dat +0 -0
  759. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pc-3.dat +0 -0
  760. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pc-4.dat +0 -0
  761. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pcseg-0.dat +0 -0
  762. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pcseg-1.dat +0 -0
  763. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pcseg-2.dat +0 -0
  764. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pcseg-3.dat +0 -0
  765. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pcseg-4.dat +0 -0
  766. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pob-tzvp.dat +0 -0
  767. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pob-tzvpp.dat +0 -0
  768. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/3-21++G.dat +0 -0
  769. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/3-21++Gs.dat +0 -0
  770. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/3-21G-diffuse.dat +0 -0
  771. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/3-21G-polarization.dat +0 -0
  772. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/3-21G.dat +0 -0
  773. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/3-21Gs.dat +0 -0
  774. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/4-31G.dat +0 -0
  775. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-31++G.dat +0 -0
  776. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-31++Gs.dat +0 -0
  777. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-31++Gss.dat +0 -0
  778. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-31+G.dat +0 -0
  779. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-31+Gs.dat +0 -0
  780. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-31+Gss.dat +0 -0
  781. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311++G.dat +0 -0
  782. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311++Gs.dat +0 -0
  783. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311++Gss.dat +0 -0
  784. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311+G.dat +0 -0
  785. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311+Gs.dat +0 -0
  786. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311+Gss.dat +0 -0
  787. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-diffuse.dat +0 -0
  788. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-polarization-2d.dat +0 -0
  789. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-polarization-2p.dat +0 -0
  790. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-polarization-3d.dat +0 -0
  791. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-polarization-3p.dat +0 -0
  792. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-polarization-d.dat +0 -0
  793. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-polarization-f.dat +0 -0
  794. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G-polarization-p.dat +0 -0
  795. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311G.dat +0 -0
  796. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311Gs.dat +0 -0
  797. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-311Gss.dat +0 -0
  798. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/pople-basis/6-31G-diffuse.dat +0 -0
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  811. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/roos-dz.dat +0 -0
  812. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/roos-tz.dat +0 -0
  813. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/sap_grasp_large.dat +0 -0
  814. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/sap_grasp_small.dat +0 -0
  815. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/sarc-dkh2.dat +0 -0
  816. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/sbkjc.dat +0 -0
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  818. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/soecp/ECPDS28MDFSO.dat +0 -0
  819. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/soecp/ECPDS28MWBSO.dat +0 -0
  820. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/soecp/ECPDS46MDFSO.dat +0 -0
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  826. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/sto-3g.dat +0 -0
  827. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/sto-6g.dat +0 -0
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  829. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/stuttgart_rsc.dat +0 -0
  830. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/tzp-dkh.dat +0 -0
  831. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/tzp.dat +0 -0
  832. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/basis/tzv.dat +0 -0
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  834. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/cmd_args.py +0 -0
  835. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/ecp.py +0 -0
  836. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gto/pp_int.py +0 -0
  837. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gw/__init__.py +0 -0
  838. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gw/gw_ac.py +0 -0
  839. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gw/gw_cd.py +0 -0
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  841. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gw/gw_slow.py +0 -0
  842. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/gw/ugw_ac.py +0 -0
  843. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/hessian/__init__.py +0 -0
  844. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/hessian/dispersion.py +0 -0
  845. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/hessian/rhf.py +0 -0
  846. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/hessian/rks.py +0 -0
  847. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/hessian/thermo.py +0 -0
  848. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/hessian/uhf.py +0 -0
  849. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/__init__.py +0 -0
  850. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/agf2/CMakeLists.txt +0 -0
  851. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/agf2/ragf2.c +0 -0
  852. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/agf2/ragf2.h +0 -0
  853. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/agf2/uagf2.c +0 -0
  854. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ao2mo/CMakeLists.txt +0 -0
  855. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ao2mo/nr_ao2mo.c +0 -0
  856. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ao2mo/nr_ao2mo.h +0 -0
  857. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ao2mo/nr_incore.c +0 -0
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  860. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ao2mo/r_ao2mo.c +0 -0
  861. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ao2mo/r_ao2mo.h +0 -0
  862. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ao2mo/restore_eri.c +0 -0
  863. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/cc/CMakeLists.txt +0 -0
  864. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/cc/ccsd_grad.c +0 -0
  865. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/cc/ccsd_pack.c +0 -0
  866. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/cc/ccsd_t.c +0 -0
  867. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/cc/uccsd_t.c +0 -0
  868. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/chkfile.py +0 -0
  869. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/CMakeLists.txt +0 -0
  870. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/CxLebedevGrid.c +0 -0
  871. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/grid_basis.c +0 -0
  872. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/grid_basis.h +0 -0
  873. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/grid_collocate.c +0 -0
  874. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/grid_common.c +0 -0
  875. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/grid_common.h +0 -0
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  877. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/multigrid.c +0 -0
  878. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/multigrid.h +0 -0
  879. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/nr_numint.c +0 -0
  880. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/numint_uniform_grid.c +0 -0
  881. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/r_numint.c +0 -0
  882. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/utils.c +0 -0
  883. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/utils.h +0 -0
  884. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/xc_deriv.c +0 -0
  885. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/dft/xcfun_itrf.c +0 -0
  886. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/CMakeLists.txt +0 -0
  887. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/autocode/auto_eval1.c +0 -0
  888. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/deriv1.c +0 -0
  889. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/deriv2.c +0 -0
  890. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/fastexp.c +0 -0
  891. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/fill_grids_int2c.c +0 -0
  892. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/fill_int2c.c +0 -0
  893. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/fill_int2e.c +0 -0
  894. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/fill_nr_3c.c +0 -0
  895. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/fill_r_3c.c +0 -0
  896. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/fill_r_4c.c +0 -0
  897. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/ft_ao.c +0 -0
  898. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/ft_ao.h +0 -0
  899. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/ft_ao_deriv.c +0 -0
  900. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/grid_ao_drv.c +0 -0
  901. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/grid_ao_drv.h +0 -0
  902. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/gto.h +0 -0
  903. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/nr_ecp.c +0 -0
  904. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/nr_ecp.h +0 -0
  905. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/gto/nr_ecp_deriv.c +0 -0
  906. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/CMakeLists.txt +0 -0
  907. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/fci.h +0 -0
  908. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/fci_4pdm.c +0 -0
  909. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/fci_contract_nosym.c +0 -0
  910. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/fci_rdm.c +0 -0
  911. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/fci_string.c +0 -0
  912. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/nevpt_contract.c +0 -0
  913. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/mcscf/select_ci.c +0 -0
  914. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/np_helper/condense.c +0 -0
  915. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/np_helper/npdot.c +0 -0
  916. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/np_helper/omp_reduce.c +0 -0
  917. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/np_helper/pack_tril.c +0 -0
  918. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/np_helper/transpose.c +0 -0
  919. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/parameters.py +0 -0
  920. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/CMakeLists.txt +0 -0
  921. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/cell.c +0 -0
  922. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/cell.h +0 -0
  923. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/cint2e.c +0 -0
  924. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/cint3c2e.c +0 -0
  925. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/fft.c +0 -0
  926. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/fft.h +0 -0
  927. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/fill_ints.c +0 -0
  928. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/fill_ints.h +0 -0
  929. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/fill_ints_screened.c +0 -0
  930. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/fill_ints_sr.c +0 -0
  931. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/ft_ao.c +0 -0
  932. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/grid_ao.c +0 -0
  933. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/hf_grad.c +0 -0
  934. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/inner_dot.c +0 -0
  935. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/neighbor_list.c +0 -0
  936. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/neighbor_list.h +0 -0
  937. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/nr_ecp.c +0 -0
  938. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/optimizer.c +0 -0
  939. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/optimizer.h +0 -0
  940. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/pbc.h +0 -0
  941. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/pp.c +0 -0
  942. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/symmetry.c +0 -0
  943. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/pbc/transform_mo.c +0 -0
  944. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ri/CMakeLists.txt +0 -0
  945. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/ri/r_df_incore.c +0 -0
  946. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/scipy_helper.py +0 -0
  947. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/solvent/CMakeLists.txt +0 -0
  948. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/CMakeLists.txt +0 -0
  949. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/cvhf.h +0 -0
  950. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/fill_nr_s8.c +0 -0
  951. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/hessian_screen.c +0 -0
  952. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/nr_direct.c +0 -0
  953. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/nr_direct.h +0 -0
  954. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/nr_direct_dot.c +0 -0
  955. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/nr_incore.c +0 -0
  956. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/nr_sgx_direct.c +0 -0
  957. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/optimizer.c +0 -0
  958. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/optimizer.h +0 -0
  959. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/r_direct_dot.c +0 -0
  960. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/r_direct_dot.h +0 -0
  961. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/r_direct_o1.c +0 -0
  962. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/rah_direct_dot.c +0 -0
  963. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/rha_direct_dot.c +0 -0
  964. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/time_rev.c +0 -0
  965. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lib/vhf/time_rev.h +0 -0
  966. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/__init__.py +0 -0
  967. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/boys.py +0 -0
  968. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/cholesky.py +0 -0
  969. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/edmiston.py +0 -0
  970. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/iao.py +0 -0
  971. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/ibo.py +0 -0
  972. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/nao.py +0 -0
  973. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/orth.py +0 -0
  974. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/pipek.py +0 -0
  975. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/pipek_jacobi.py +0 -0
  976. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/lo/vvo.py +0 -0
  977. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/PiOS.py +0 -0
  978. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/addons.py +0 -0
  979. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/apc.py +0 -0
  980. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/avas.py +0 -0
  981. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/casci_symm.py +0 -0
  982. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/df.py +0 -0
  983. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/dmet_cas.py +0 -0
  984. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/mc1step_symm.py +0 -0
  985. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/mc2step.py +0 -0
  986. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/mc_ao2mo.py +0 -0
  987. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/newton_casscf_symm.py +0 -0
  988. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/ucasci.py +0 -0
  989. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/umc2step.py +0 -0
  990. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mcscf/umc_ao2mo.py +0 -0
  991. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/md/__init__.py +0 -0
  992. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/md/distributions.py +0 -0
  993. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/md/integrators.py +0 -0
  994. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mp/dfgmp2.py +0 -0
  995. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mp/mp2f12_slow.py +0 -0
  996. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/mrpt/__init__.py +0 -0
  997. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/nac/__init__.py +0 -0
  998. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/nac/sacasscf.py +0 -0
  999. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/__all__.py +0 -0
  1000. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/__init__.py +0 -0
  1001. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/adc/__init__.py +0 -0
  1002. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/adc/dfadc.py +0 -0
  1003. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/adc/kadc_ao2mo.py +0 -0
  1004. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/adc/kadc_rhf.py +0 -0
  1005. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/adc/kadc_rhf_amplitudes.py +0 -0
  1006. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/adc/kadc_rhf_ea.py +0 -0
  1007. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/adc/kadc_rhf_ip.py +0 -0
  1008. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/ao2mo/__init__.py +0 -0
  1009. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/ao2mo/eris.py +0 -0
  1010. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/__init__.py +0 -0
  1011. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/ccsd.py +0 -0
  1012. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/eom_kccsd_ghf.py +0 -0
  1013. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/eom_kccsd_rhf.py +0 -0
  1014. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/eom_kccsd_rhf_ea.py +0 -0
  1015. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/eom_kccsd_rhf_ip.py +0 -0
  1016. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/eom_kccsd_uhf.py +0 -0
  1017. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kccsd.py +0 -0
  1018. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kccsd_rhf.py +0 -0
  1019. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kccsd_rhf_ksymm.py +0 -0
  1020. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kccsd_t.py +0 -0
  1021. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kccsd_t_rhf.py +0 -0
  1022. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kccsd_t_rhf_slow.py +0 -0
  1023. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kccsd_uhf.py +0 -0
  1024. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kintermediates.py +0 -0
  1025. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kintermediates_rhf.py +0 -0
  1026. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kintermediates_rhf_ksymm.py +0 -0
  1027. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kintermediates_uhf.py +0 -0
  1028. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/cc/kuccsd_rdm.py +0 -0
  1029. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/ci/__init__.py +0 -0
  1030. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/ci/cisd.py +0 -0
  1031. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/ci/kcis_rhf.py +0 -0
  1032. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/__init__.py +0 -0
  1033. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/aft_ao2mo.py +0 -0
  1034. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/aft_jk.py +0 -0
  1035. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/df_ao2mo.py +0 -0
  1036. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/fft_ao2mo.py +0 -0
  1037. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/ft_ao.py +0 -0
  1038. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/gdf_builder.py +0 -0
  1039. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/mdf.py +0 -0
  1040. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/df/mdf_ao2mo.py +0 -0
  1041. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/__init__.py +0 -0
  1042. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/cdft.py +0 -0
  1043. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/kroks.py +0 -0
  1044. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/multigrid/__init__.py +0 -0
  1045. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/multigrid/pp.py +0 -0
  1046. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/multigrid/utils.py +0 -0
  1047. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/numint2c.py +0 -0
  1048. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/dft/roks.py +0 -0
  1049. {pyscf-2.7.0/pyscf/solvent/hessian → pyscf-2.9.0/pyscf/pbc/eph}/__init__.py +0 -0
  1050. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/eph/eph_fd.py +0 -0
  1051. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/geomopt/__init__.py +0 -0
  1052. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/geomopt/geometric_solver.py +0 -0
  1053. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/__init__.py +0 -0
  1054. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/krhf.py +0 -0
  1055. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/krks.py +0 -0
  1056. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/kuhf.py +0 -0
  1057. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/kuks.py +0 -0
  1058. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/rhf.py +0 -0
  1059. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/rks.py +0 -0
  1060. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/uhf.py +0 -0
  1061. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/grad/uks.py +0 -0
  1062. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/__init__.py +0 -0
  1063. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/__init__.py +0 -0
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  1069. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-cc-dzvp.dat +0 -0
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  1076. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-dzvp.dat +0 -0
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  1078. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-qzv3p.dat +0 -0
  1079. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-szv-molopt-sr-q9.dat +0 -0
  1080. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-szv-molopt-sr.dat +0 -0
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  1084. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-tzv2p-molopt.dat +0 -0
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  1086. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-tzv2px-molopt.dat +0 -0
  1087. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/gth-tzvp-molopt.dat +0 -0
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  1090. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/split_GTH_BASIS_SETS.py +0 -0
  1091. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/basis/split_HFX_BASIS.py +0 -0
  1092. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/ecp.py +0 -0
  1093. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/ewald_methods.py +0 -0
  1094. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/pseudo/__init__.py +0 -0
  1095. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/pseudo/gth-blyp.dat +0 -0
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  1107. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gto/pseudo/split_GTH_POTENTIALS.py +0 -0
  1108. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gw/__init__.py +0 -0
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  1111. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gw/kgw_slow_supercell.py +0 -0
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  1113. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gw/krgw_cd.py +0 -0
  1114. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/gw/kugw_ac.py +0 -0
  1115. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/lib/__init__.py +0 -0
  1116. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/lib/arnoldi.py +0 -0
  1117. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/lib/chkfile.py +0 -0
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  1119. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/lib/kpts_helper.py +0 -0
  1120. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/lib/ktensor.py +0 -0
  1121. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/lib/linalg_helper.py +0 -0
  1122. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mp/__init__.py +0 -0
  1123. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mp/kmp2.py +0 -0
  1124. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mp/kmp2_ksymm.py +0 -0
  1125. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mp/kmp2_stagger.py +0 -0
  1126. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mp/kump2.py +0 -0
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  1128. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mpicc/__init__.py +0 -0
  1129. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mpicc/kccsd_rhf.py +0 -0
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  1131. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mpicc/mpi_kpoint_helper.py +0 -0
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  1133. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mpitools/mpi_blksize.py +0 -0
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  1136. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/mpitools/mpi_pool.py +0 -0
  1137. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/scf/__init__.py +0 -0
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  1143. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/scf/kghf_ksymm.py +0 -0
  1144. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/scf/krohf.py +0 -0
  1145. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/scf/newton_ah.py +0 -0
  1146. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/scf/rohf.py +0 -0
  1147. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/scf/scfint.py +0 -0
  1148. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/scf/uhf.py +0 -0
  1149. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/__init__.py +0 -0
  1150. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/basis.py +0 -0
  1151. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/geom.py +0 -0
  1152. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/group.py +0 -0
  1153. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/pyscf_spglib.py +0 -0
  1154. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/space_group.py +0 -0
  1155. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/symmetry.py +0 -0
  1156. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/symm/tables.py +0 -0
  1157. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tddft/__init__.py +0 -0
  1158. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tdscf/__init__.py +0 -0
  1159. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tdscf/krks.py +0 -0
  1160. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tdscf/kuks.py +0 -0
  1161. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tdscf/rks.py +0 -0
  1162. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tdscf/uks.py +0 -0
  1163. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tools/__init__.py +0 -0
  1164. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tools/make_test_cell.py +0 -0
  1165. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tools/print_funcs.py +0 -0
  1166. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tools/pyscf_ase.py +0 -0
  1167. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tools/pywannier90.py +0 -0
  1168. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/tools/tril.py +0 -0
  1169. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/x2c/__init__.py +0 -0
  1170. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/pbc/x2c/x2c1e.py +0 -0
  1171. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/post_scf.py +0 -0
  1172. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/qmmm/__init__.py +0 -0
  1173. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/qmmm/itrf.py +0 -0
  1174. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/qmmm/mm_mole.py +0 -0
  1175. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/__init__.py +0 -0
  1176. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/atom_hf.py +0 -0
  1177. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/atom_hf_pp.py +0 -0
  1178. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/atom_ks.py +0 -0
  1179. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/chkfile.py +0 -0
  1180. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/cphf.py +0 -0
  1181. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/diis.py +0 -0
  1182. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/ghf.py +0 -0
  1183. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/ghf_symm.py +0 -0
  1184. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/hf_symm.py +0 -0
  1185. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/jk.py +0 -0
  1186. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/rohf.py +0 -0
  1187. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/stability.py +0 -0
  1188. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/stability_slow.py +0 -0
  1189. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/ucphf.py +0 -0
  1190. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/scf/uhf_symm.py +0 -0
  1191. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/sgx/__init__.py +0 -0
  1192. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/sgx/sgx.py +0 -0
  1193. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/sgx/sgx_jk.py +0 -0
  1194. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/_ddcosmo_tdscf_grad.py +0 -0
  1195. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/ddcosmo.py +0 -0
  1196. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/ddpcm.py +0 -0
  1197. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/grad/__init__.py +0 -0
  1198. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/grad/ddcosmo_grad.py +0 -0
  1199. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/grad/smd.py +0 -0
  1200. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/grad/smd_experiment.py +0 -0
  1201. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/hessian/smd_experiment.py +0 -0
  1202. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/pol_embed.py +0 -0
  1203. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/solvent/smd_experiment.py +0 -0
  1204. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/soscf/__init__.py +0 -0
  1205. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/Dmatrix.py +0 -0
  1206. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/__init__.py +0 -0
  1207. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/addons.py +0 -0
  1208. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/basis.py +0 -0
  1209. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/cg.py +0 -0
  1210. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/msym.py +0 -0
  1211. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/param.py +0 -0
  1212. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/symm/sph.py +0 -0
  1213. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tddft/__init__.py +0 -0
  1214. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tdscf/__init__.py +0 -0
  1215. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tdscf/dks.py +0 -0
  1216. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/__init__.py +0 -0
  1217. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/c60struct.py +0 -0
  1218. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/chgcar.py +0 -0
  1219. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/chkfile_util.py +0 -0
  1220. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/cubegen.py +0 -0
  1221. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/dump_mat.py +0 -0
  1222. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/mo_mapping.py +0 -0
  1223. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/molden.py +0 -0
  1224. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/ring.py +0 -0
  1225. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/tools/wfn_format.py +0 -0
  1226. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/__init__.py +0 -0
  1227. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/_response_functions.py +0 -0
  1228. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/dft.py +0 -0
  1229. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/newton_ah.py +0 -0
  1230. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/sfx2c1e.py +0 -0
  1231. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/sfx2c1e_grad.py +0 -0
  1232. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/sfx2c1e_hess.py +0 -0
  1233. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf/x2c/stability.py +0 -0
  1234. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf.egg-info/dependency_links.txt +0 -0
  1235. {pyscf-2.7.0 → pyscf-2.9.0}/pyscf.egg-info/top_level.txt +0 -0
  1236. {pyscf-2.7.0 → pyscf-2.9.0}/setup.cfg +0 -0
  1237. {pyscf-2.7.0 → pyscf-2.9.0}/setup.py +0 -0
pyscf-2.9.0/CHANGELOG ADDED
@@ -0,0 +1,1549 @@
1
+ PySCF 2.9.0 (2025-04-20)
2
+ ------------------------
3
+ * Added
4
+ - Analytical PCM Hessian
5
+ - Density fitting UCCSD
6
+ - A general driver for finite difference gradients and hessian
7
+ * Improved
8
+ - Assign default auxiliary basis for def2-mtzvp and def2-mtzvpp
9
+ - Better initial guess for smearing
10
+ - libxc interface for passing omega in composite functionals
11
+ - The tolerance in geometry when identifying point group symmetry
12
+ - Adjust PBC GDF eigenvalue decomposition accuracy
13
+ - Special treatment in PBC GDF for dimension=0 systems
14
+ - The density matrices computation performance of fci_dhf_slow
15
+ * Fixes
16
+ - Dimension bug in spinor X2C code
17
+ - C-PCM and SS(V)PE gradients
18
+ - Complex density matrices for DFHF
19
+ - Fixes COSMO-RS functionality
20
+ - DF auxiliary basis assignment for ghost atoms
21
+ - Lattice sum range issue for low-dimensional systems
22
+ - The precision when dumping molecular geometry in fromfile/fromstring function
23
+ - kpts_band in the rsdf method.
24
+
25
+
26
+ PySCF 2.8.0 (2025-01-14)
27
+ ------------------------
28
+ * Added
29
+ - The ccpy extension (https://github.com/piecuch-group/ccpy) which enables various Coupled cluster methods
30
+ - COSMO-RS functionality
31
+ - DFMP2 and RPA for UHF reference
32
+ - Add functions to read and write Cell geometry, allowing Direct or Cartesian in VASP input
33
+ - Add def2-mtzvp and def2-mtzvpp basis sets for 3c methods
34
+ - libqcschema module to load qcschema json
35
+ * Improved
36
+ - Integral screening for Gaunt and Breit term
37
+ - Performance and multi-threading efficiency of DFMP2 and RPA, gaining 4x - 8x speedups
38
+ - Stability analysis for extended system, matching with molecular version
39
+ - Update to Libxc 7.0
40
+ - Adjust TDDFT amplitudes to follow the CIS convention
41
+ - Accelerate DFT density and XC potential, especially for MGGA.
42
+ - Automatically apply SCF initial guess from existing wavefunction.
43
+ - Improve the first order derivatives of density fitting J/K matrices for non-hermitian density matrices.
44
+ - Improve TDDFT diagonalization numerical stability.
45
+ - Remove redundant integral computation for SR-only (such as HSE) and LR-only (such as wb97) RSH functionals
46
+ * Fixes
47
+ - ASE interfaces regarding to the API changes in ASE v3.11.0
48
+ - Missing conj() for t2 amps in GCCSD and UCCSD routines
49
+ - UCCSD damping
50
+ - Fix biased implementation for the becke radi method.
51
+ - Fix DFT define_xc_ interface and examples.
52
+ - Fix SR-ERI integral screening estimator.
53
+ - Fix CCSD two-particle density matrix for complex orbitals.
54
+ - Take cell.rcut into account when generating becke grids for low-dimensional systems.
55
+
56
+
57
+ PySCF 2.7.0 (2024-09-23)
58
+ ------------------------
59
+ * Added
60
+ - Superposition of Atomic Potentials (SAP) initial guess for SCF methods.
61
+ - Supports pickle serialization for all methods.
62
+ - ADC 1-particle density matrix and dipole moment.
63
+ - Spin-separated 3-RDMs.
64
+ - Traceless quadrupole moment for SCF methods.
65
+ - Supports for fractional coordinates in Cell.
66
+ - Population analysis for KSCF.
67
+ - A, B matrices for k-point TDRKS.
68
+ - AutoAux scheme for generating auxiliary basis sets.
69
+ * Improved
70
+ - Automatic cleanup for HDF5 temporary files.
71
+ - Saves CI coefficients for SA-CASSCF to chkfile.
72
+ - UHF/UKS initial guess with better spin-symmetry breaking code.
73
+ - New attribute .cycles in SCF methods and CC methods to save iteration counts.
74
+ - FFT performance.
75
+ - CPHF convergence in nuclear hessian.
76
+ - Eigenvalue solver for linear response theory.
77
+ - Enhance TDDFT code with symmetry adaptation in diagonalization.
78
+ - More efficient PBC-CDERI loading.
79
+ * Fixes
80
+ - The missing atomic radius parameters for the Treutler-Ahlrichs scheme in DFT grids
81
+ - Symmetry adapted GHF with complex orbitals.
82
+ - Complex-valued FCI matvec operation.
83
+ - Bug in Smearing-RHF for odd number of electrons and disable Smearing-ROHF.
84
+ - MP2 FNO bug when pct_occ=1 .
85
+ - DHF dipole moment.
86
+ - Bug in PBC ECP integral.
87
+ - Bug in parser for spin-orbit ECPs.
88
+ - Wrong transition dipoles of triplet TDDFT states.
89
+ - GHF-X2C dipole moment.
90
+ - FCI symmetry validation code for cylindrical symmetry.
91
+ - Missing complex conjugation for complex orbitals in SymAdaptedGHF.
92
+ - Custom UHF objects using the Hamiltonian in FCIDUMP.
93
+
94
+
95
+ PySCF 2.6.2 (2024-06-19)
96
+ ------------------------
97
+ * Fixes
98
+ - Compatibility issues for NumPy 2.0 release.
99
+
100
+
101
+ PySCF 2.6.1 (2024-06-17)
102
+ ------------------------
103
+ * Improved
104
+ - Allow for custom options for opening h5py file.
105
+ - Linear dependency threshold for density fitting auxiliary basis.
106
+ * Fixes
107
+ - Compatibility issues due to NumPy 2.0 release.
108
+
109
+
110
+ PySCF 2.6.0 (2024-06-01)
111
+ ------------------------
112
+ * Added
113
+ - SMD and PCM solvent model
114
+ - Nuclear Hessian for SMD and PCM solvent models
115
+ * Improved
116
+ - DFT-D3 and DFT-D4 interfaces. Supporting assigning the acronym such as
117
+ WB97M-D3BJ, WB97M-D4 to the xc attribute.
118
+ - Optimized density fitting performance.
119
+ - Memory usage for RPA.
120
+ - FCI coefficients transformation for more than 64 orbitals.
121
+ - Multi-grid DFT performance greatly optimized.
122
+ * Fixes
123
+ - CASCI/CASSCF calculations when mixing C1 symmetry and symmetry=False .
124
+ - "atom" initial guess for ECP with super-heavy atoms.
125
+ - Complex conjugation issues in single k-point JK-build in PBC DF.
126
+ - CCSD(T) for complex orbitals.
127
+ - Dipole moment in SFX2C.
128
+ - High-order XC derivatives.
129
+ - Integer overflow in FCI large address.
130
+ - Multi-collinear XC higher order derivatives.
131
+ - Smearing with predefined chemical potential.
132
+ - Fix frozen attribute for MP2 density matrices.
133
+
134
+
135
+ PySCF 2.5.0 (2024-02-03)
136
+ ------------------------
137
+ * Added
138
+ - SA-CASSCF Nonadiabatic Coupling Vectors
139
+ - The to_gpu function to convert pyscf objects to gpu4pyscf objects.
140
+ - 4th, and 5th order XC derivatives.
141
+ * Improved
142
+ - DIIS with damping for gapless systems.
143
+ - CPHF solver with level shift for gapless systems.
144
+ - The memory footprint for rsdf_builder and rsjk_builder.
145
+ - Use UHF natural orbital for RHF chkfile initial guess.
146
+ - Pipek Mezey + Stability check using Jacobi sweep.
147
+ - The conversion between FCI strings and addresses for more than 64 orbitals.
148
+ - The interface to the dftd3 and dftd4 dispersion correction modules.
149
+ - Switch off the sparsity treatment in DFT numerical integration for small system.
150
+ - Lattice-sum cutoff for non-orthogonal cell.
151
+ - Allow turning off AO symmetry for PBC DFT.
152
+ * Fixes
153
+ - cp2k basis parsers
154
+ - k2gamma for dft classes.
155
+ - Mole.magmom attribute serialization error.
156
+ - post-hf Gradients with Cartesian GTOs.
157
+ - Basis order problem in molden.load .
158
+ - PBC DFT Becke grids rounding error.
159
+ - PBC rsdf for un-sorted basis.
160
+ - The get_bands function with k-point symmetry.
161
+
162
+
163
+ PySCF 2.4.0 (2023-10-16)
164
+ ------------------------
165
+ * Added
166
+ - Mulliken population analysis for KGHF.
167
+ - Interface to libmsym (https://github.com/mcodev31/libmsym) for handeling non-abelian symmetry.
168
+ - A variant of the Hückel initial SCF guess.
169
+ - PBC TDDFT with non-zero particle-hole momentum transfer for GDF/RSDF (same as the kshift used in pbc eom-ee-ccsd).
170
+ - PBC TDDFT with twisted boundary conditions (both single k-point and k-point mesh).
171
+ - NVT Molecular Dynamics.
172
+ - Gaussian charge model for int1e_grids.
173
+ - GHF with fractional occupancy.
174
+ - FCIDUMP for MCSCF orbitals.
175
+ - DF-CCSD and frozen core for FNO-CCSD.
176
+ - multi-collinear functional for PBC DFT.
177
+ - non-local functional (VV10) for PBC DFT.
178
+ - "undo" method for dynamic classes. This method can revert the action for conversion methods such as "density_fit()", "x2c()", "newton()", "as_scanner()", etc..
179
+ - Merged basis parser for molecular GTO basis and GTH basis. GTH basis can be assigned to Mole object directly.
180
+ - Merged ECP and PP parser. PP can be assigned to Mole object directly.
181
+ - C-PCM, IEF-PCM, COSMO, and SS(V)PE solvent models and their Gradients.
182
+ * Improved
183
+ - Performance of the gradients of nuclear repulsion energy.
184
+ - JK builder for short-range ERIs.
185
+ - The layout of the Mole class and Cell class. Remove the inheritance between Cell and Mole.
186
+ - The layout of various SCF classes and the conversion methods (to_ks, to_hf, to_uhf, to_ghf, etc.) between different SCF objects.
187
+ - The layout of various MCSCF classes.
188
+ - New style to generate dynamic class for DF methods, X2C, QMMM, SOSCF, Solvent model, StateAverageMCSCF, Scanner methods, etc.
189
+ - SCF smearing method.
190
+ - Make Mole and Cell object picklable.
191
+ * Fixes
192
+ - supercell symmetry.
193
+ - NAO orbital localization.
194
+ - Finite-size correction for PBC TDDFT (1/Nk convergence to TDL and agreement with molecular code).
195
+ - Bugs in FCI for num. orbitals >= 64.
196
+ - PBC empty cell error.
197
+ - The edge case CAS(2,2) for Selected CI.
198
+ - Dimension issue in PBC-GDF cderi tensor.
199
+ - Assume 46 and 78 core configurations to be f-in-valence.
200
+ - Coding styles and deprecated warnings from numpy.
201
+
202
+
203
+ PySCF 2.3.0 (2023-07-04)
204
+ ------------------------
205
+ * Added
206
+ - Gaussian MM charges
207
+ - Stepsize scheduler for UCASSCF
208
+ - APC active space selection
209
+ - f-in-core ECPs and core configurations
210
+ - TDDFT gradients for triplet states
211
+ - Support complex-valued h1e in fci_slow.absorb_h1e
212
+ * Improved
213
+ - Update B3LYP functional to correspond to the original definition
214
+ - Disable CLI parser by default
215
+ - Accuracy and performance of RSDF, GDF and RSJK methods
216
+ - get_lattice_Ls, and energy cutoff estimation
217
+ - Performance of PBC-AFTDF get_k method
218
+ - BCCD with semi-canonicalized orbitals
219
+ - Smearing in the molecular ROHF method
220
+ - Refactors FCI cylindrical symmetry implementation and improves its stability and performance
221
+ - Update interface of geomeTRIC library to support initial hessian
222
+ - NLC parser and NLC integral code
223
+ * Fixes
224
+ - Update ddCOSMO functional to make it behave the same to Gaussian
225
+ - Deprecated keywords when calling scipy.linalg.solve
226
+ - The numerical issue in df hessian when the overlap matrix is ill-conditioned
227
+ - PBC-DFT eval_rho2 method
228
+ - xc parser for hybrid LDA functional
229
+ - SACASSCF grad fcasscf right track nelecas
230
+ - density fitting for GHF objects
231
+ - Fix bug in MP2 gradients scanner
232
+
233
+
234
+ PySCF 2.2.1 (2023-03-29)
235
+ ------------------------
236
+ * Added
237
+ - Density fitting gradients and hessian for RSH functionals
238
+ - SCS-MP2 and SCS-KMP2
239
+ - Configurations of f-in-core ECPs
240
+ - ao2mo integral transformation for GHF orbitals with scalar ERIs
241
+ - Interface to access basis Set Exchange DB
242
+ - DF-UCISD
243
+ - Moment resolved GF-CCSD
244
+ - MOM (maximum overlap method) for GHF and DHF
245
+ * Improved
246
+ - PBC GDF K-build performance
247
+ - Read cubegen for crystalline systems
248
+ * Fixes
249
+ - Outdated examples
250
+ - Update to libcint 5.3.0 to filter warning messages produced by 5.2.0
251
+ - PBC density fitting CDERIArray object backward compatibility
252
+ - DIIS numerical instability
253
+ - C2v molecule orientation when symmetry is enabled
254
+ - The missed HF exchange in RSH functional wB97
255
+ - Gauge origin of Boys localization
256
+ - Check the root numbers during Davidson diagonalization iterations
257
+ - Removed hard-coded environment variable MKL_NUM_THREADS=1
258
+ - Conflicts in GDF cderi tensor for RSH functionals
259
+
260
+
261
+ PySCF 2.2.0 (2023-03-09)
262
+ ------------------------
263
+ * Added
264
+ - Molecular nuc grad with DF ERIs for ROHF, ROKS, CASSCF, SA-CASSCF
265
+ - K-point symmetry adapted crystalline orbital basis
266
+ - K-point symmetry for GDF, MDF, KCCSD
267
+ - VV10 gradients
268
+ - Spin density population analysis for MCSCF
269
+ - BCCD
270
+ - Cylindrical symmetry for FCI wavefunction
271
+ - Use a linearly independent basis in DIIS
272
+ - Full CI for complex integrals
273
+ - Maxwell-Boltzmann Velocity Distribution in BOMD
274
+ * Improved
275
+ - PBC integral accuracy for GDF, MDF, FFT, AFT
276
+ - PBC integral accuracy of 2D system for insufficient integral grids
277
+ - Update Libxc to Libxc-6
278
+ - get_monkhorst_pack_size for numerical noise
279
+ - Unit recognization unified
280
+ * Fixed
281
+ - MCSCF without initializing SCF
282
+ - Memory leaks in C kernels for CCSD(T)
283
+ - Fully spin-polarized UMP2, DF-UMP2, UCCSD, UCCSD(T) bugfixes
284
+ - numpy_helper.hermi_sum for non-contiguous array
285
+ - Padding and frozen orbitals bugs in KMP2
286
+ - PolEmbed interface and CASCI with PE
287
+ - Molecular density fitting hessian
288
+ - K-point symmetry adapted KS-DFT with SOSCF solvers
289
+
290
+
291
+ PySCF 2.1.1 (2022-09-21)
292
+ ------------------------
293
+ * Added
294
+ - CDERIArray class to load PBC GDF tensor
295
+ * Improved
296
+ - MCSCF fix_spin_ as a class for SA-CASSCF gradient compatibility
297
+ - PBC GDF and MDF accuracy
298
+ - PBC X2C hcore integrals performance
299
+ * Fixed
300
+ - Integral screening bug in ft_ao
301
+ - EOM-EE RCCSD intermediates
302
+ - MGGA fully polarized system bug
303
+
304
+
305
+ PySCF 2.1.0 (2022-09-01)
306
+ ------------------------
307
+ * Added
308
+ - k-point symmetry for mean-field methods and MP2
309
+ - UCASSCF work with state_average
310
+ - make_rdm12s for MCSCF state_average
311
+ - Staggered mesh method for k-point restricted periodic MP2 energy
312
+ - PBC-X2C1E DFT methods in spin-orbital basis
313
+ - Adds make_rdm2 to RHF and UHF
314
+ - Auto-generate frozen-core orbitals
315
+ - Atomic chemical core configuration
316
+ - Various MGGA functionalities (Gradients, Hessian, TDDFT, etc.)
317
+ - Mcfun (multi-collinear functional) and relevant GKS, DKS, X2C-DFT, TDDFT methods for molecules
318
+ - Supports to aarch64 architecture
319
+ - Atomic spherically averaged DFT and add HFS ground-state configurations
320
+ - RPA, URPA
321
+ - UCCSD with density fitting
322
+ - X2C for GHF/GKS on spin-orbital basis (make identical to X2C-SCF with j-adapted basis)
323
+ - Gamma-point periodic EA/IP-ADC
324
+ - K-point periodic EA/IP-ADC
325
+ - CVS-IP-ADC
326
+ * Improved
327
+ - DFT numerical integral module with better integral screening
328
+ - Aligns E(HF) of KRCCSD with other CCSD classes, and CISD, MP2 classes
329
+ - Adjustable screening value for eval_ao function
330
+ - MCSCF convergence for small systems
331
+ - Renormalized perturbative triples correction in CCSD
332
+ - Optimises UCCSD 1DM
333
+ - Linear dependency handled for IAOs
334
+ - vhf prescreeening efficiency
335
+ - Lattice sum ranges in PBC AO-value evaluation
336
+ - Various cutoffs in PBC integrals for exceptional cells
337
+ - Handles 1e system for KS methods
338
+ - Try to use original axes when creating Mole object if pointgroup is inputed
339
+ - More symmetry information of MCSCF active space dumped
340
+ - SA-CASSCF nuc grad API reform
341
+ - Upgrade cint library to v5
342
+ - Accelerating SGX module
343
+ - rsdf, gdf, aft, mdf, ft_ao, rsjk modules refactored and their performance are optimized
344
+ - The return status of HF statbility checks
345
+ - GDF 3-index integral tensor loader to support tensor sliced from disk
346
+ * Fixed
347
+ - Dynamic level shift for UHF
348
+ - gamma-point TDDFT by adding response fn
349
+ - Initial guess issue for uhf custom Hamiltonian
350
+ - Projecting the dm to a larger basis set in PBC systems using from_chk() and init_guess
351
+ - Ensure deterministic result from pyscf.lib.einsum
352
+ - Symmetry detection bugs and C2v orientation for planar molecules
353
+ - State-average CASSCF 1RDM for orbital canonicalization
354
+ - wfnsym for state_average CASSCF
355
+ - Concatenating two Molecule objects with ecp
356
+ - cisd.tn_addrs_signs for impossible excitations
357
+ - KMP2 takes KHF with precomputed GDF integrals
358
+ - Huckel guess with mol.cart=True
359
+ - UCCSD 2RDM without frozen
360
+
361
+
362
+ PySCF 2.0.0 (2021-11-01)
363
+ ------------------------
364
+ * Added
365
+ - Basis selector '@' to load basis from a file
366
+ - Native version of DF-MP2 for RHF and UHF references
367
+ - Cholesky orbitals as the initial guess for iterative orbital localization.
368
+ - FNOCCSD
369
+ - SCS-DF-MP2
370
+ - Relaxed RHF-DF-MP2 density
371
+ - int1e_grids function to compute Coulomb integrals for a list of grids
372
+ - GDF-KMP2
373
+ - Custom Hamiltonian for UHF
374
+ - Natural Orbitals for DFCASCI and DFCASSCF with approximate CI solvers
375
+ - slow and fast QCISD and QCISD(T) for restricted refs
376
+ * Improved
377
+ - Pacakge layout, static checks, and code releasement pipeline.
378
+ Certain features were removed from core modules, including: cornell_shci,
379
+ dftd3, dmrgscf, doci, fciqmcscf, icmpspt, mbd, Molpro2Pyscf, mpicc, nao,
380
+ semiempirical, shciscf, tblis, prop/efg, prop/esr, prop/freq, prop/gtensor,
381
+ prop/hfc, prop/magnetizability, prop/nmr, prop/nsr, prop/polarizability,
382
+ prop/rotational_gtensor, prop/ssc, prop/zfs
383
+ - Compatibility improvements for Python 3.6 and newer
384
+ - Compatibility improvements for h5py 3.0 and newer
385
+ - Online documentation (https://pyscf.org/user.html)
386
+ - Upgrade Libxc to 5.1.7
387
+ - FCIDUMP interface to include ECP scalar contribution
388
+ - DMRG interface
389
+ - Ghost atoms in IAO/IBO
390
+ - PBC-GDF auxiliary basis treatment with nonzero drop_eta
391
+ - pivoted Cholesky factorization
392
+ - Support high angular momentum in GTO basis (up to l=15)
393
+ - Make Exact FF GW root finding more robust, reduce eta
394
+ - cubegen for arbitrary unit cells
395
+ - Range of lattice sum for non-orthogonal lattice
396
+ - krkspu
397
+ - Number of calls to gc.collect()
398
+ * Fixed
399
+ - PBC-GDF and PBC-MDF when computing RSH functionals
400
+ - The edge case for zero beta electrons in SCF
401
+ - Atomic initial guess if multiple elements have ecp
402
+ - The ordering of unique points in kpts.unique function
403
+ - J matrix of AFTDF
404
+ - kuccsd rdm1
405
+ - GDF int2c2e integrals for non-symmetric range of lattice sum
406
+ - Complex-valued symm. adapted basis
407
+ - NEVPT2 for multistate CI wave function
408
+
409
+
410
+ PySCF 1.7.6 (2021-03-28)
411
+ ------------------------
412
+ * Added
413
+ - KMP2 2-particle density matrix
414
+ - PBC J, K matrices module rsjk (RangeSeparationJKBuilder)
415
+ - ADC (RADC, UADC, DFADC)
416
+ - Eigenvector analyzer for IP and EA, RADC and UADC
417
+ - Analytical nuclear gradients for state-average CASSCF
418
+ - Support SO3 symmetry
419
+ - ECP-SOC for GHF/GKS
420
+ - density fitting GMP2
421
+ - G0W0 approximations (analytic continuation, contour deformation)
422
+ - Auxiliary second-order Green's function perturbation theory (AGF2)
423
+ - Smearing for molecules
424
+ - Visscher small component correction approximation for DHF
425
+ - DFT+U
426
+ * Improved
427
+ - Threading safety in Mole temporary context
428
+ - Basis parser to support arithmetic expressions in basis data
429
+ - dmrgci interface refactored
430
+ - MP2 gradients performance
431
+ - Interface of polariazable embedding with integral batching
432
+ - Electron-phonon Hamiltonian module refactored
433
+ - Remove memorization of Ewald parameters.
434
+ - molden dumper refactored
435
+ * Fixed
436
+ - stack overflow in ecp integral code
437
+ - SCAN functional crashing problem
438
+ - Ghost atoms for IAOs/IBOs
439
+ - Fix fractional occupations for case of zero beta electrons
440
+ - mcscf project_init_guess
441
+ - Symmetry verification bug when deducting subgroup
442
+ - Mole.set_geom_ bug
443
+ - GDF with non-zero drop_eta (for diffused auxiliary basis)
444
+ - Paddings in KMP2 when remove_linear_dep_ is applied
445
+ - SC-NEVPT2 Sijr Srsi
446
+
447
+
448
+
449
+ PySCF 1.7.5 (2020-9-27)
450
+ -----------------------
451
+ * Added
452
+ - Upgrade cint library to v4
453
+ - Upgrade xcfun library to v2.1.0
454
+ - Kramers' restricted Dirac-Hartree-Fock, X2C, DHF-SOSCF
455
+ - Heavy elements basis in MINAO
456
+ - Coulomb integrals of short range part for attenuated Coulomb
457
+ - Polarizability and hyperpolarizability under PBC
458
+ * Improved
459
+ - Support pseudo potential Atomic HF
460
+ - Atomic HF for 1-electron system
461
+ - Check basis angular momentum in mol.intor (l < 7)
462
+ - FCIDUMP wrapper fcidump.py
463
+ * Fixed
464
+ - Bugs in Mole.fromstring
465
+ - Buffer size bug in DHF JK builder for very small systems
466
+ - Fix pbc-eom-eaccsd_star bug
467
+ - Bugs in integral screening for very tight direct_scf_tol
468
+
469
+
470
+ PySCF 1.7.4 (2020-8-2)
471
+ ----------------------
472
+ * Added
473
+ - FCIDUMP reader to load FCIDUMP and generate custom system.
474
+ - Natural orbitals occupations to mc.mo_occ
475
+ - Supporting UHF orbitals in FCI factory function
476
+ * Improved
477
+ - Linear dependency treatment for basis uncontraction
478
+ * Fixed
479
+ - ECP gradients bug when the system contains two or more ecp atoms
480
+ - CHGCAR writer
481
+ - Basis parser for basis in Gaussian 94 format
482
+
483
+
484
+ PySCF 1.7.3 (2020-6-10)
485
+ -----------------------
486
+ * Added
487
+ - CcECP basis
488
+ - Spin 1RDM for shci
489
+ - PM localization for charge populations based on Becke partition
490
+ * Improved
491
+ - Compatibility of get_jk methods between mcscf class and scf class
492
+ - CPPE interface
493
+ - Interface between IAO and PM
494
+ * Fixed
495
+ - an CCSD integral bug introduced in 1.7.1
496
+ - Td as its subgroup C2v
497
+ - Fix an error when calculating grad of dft method with "HF" as xc
498
+
499
+
500
+
501
+ PySCF 1.7.2 (2020-5-13)
502
+ -----------------------
503
+ * Added
504
+ - Electron-phonon Hamiltonian under PBC (pbc.eph)
505
+ - State-average CASSCF example
506
+ - Spin density analysis to uhf.analyze()
507
+ - Passing point group and wfnsym to Dice
508
+ - Analytical nuclear gradients for PBC SCF methods (based FFTDF)
509
+ - Geometry optimizer and Gradients scanner for pbc
510
+ - ccECPs and corresponding basis sets
511
+ - Interacting hybrid method i-CCSD/MP2
512
+ - Allow FNOs to be specified by number of active virtuals
513
+ - Enable frozen natural orbital CC
514
+ - Partial Cholesky orthogonalization
515
+ - Use requested initial guess in DHF
516
+ * Improved
517
+ - libxc5 compatibility
518
+ - Redundant def2-*-jkfit basis sets were replaced by the def2-universal-jkfit basis
519
+ - FCIDUMP reader
520
+ - Treatment of breaksym in UHF init_guess function
521
+ - literature references and DOIs
522
+ - Ensure active orbitals are not changed during MCSCF canonicalization
523
+ - Improve linear dependency treatment in projection function in scf/addons.py
524
+ - Use customized get_xmat method for x2c if applicable
525
+ * Fixed
526
+ - Integral bug in magnetizability
527
+ - Integer overflow in multigrid
528
+ - pbc.mdf h5 file initialization
529
+ - density fitting auxiliary basis for cc-pV*Z
530
+ - Handle basis and pp for ghost atoms in pbc initialization
531
+ - ecp treatments for ghost atoms
532
+ - FCI wfnsym initial guess
533
+ - SCF initial guess for super-heavy elements
534
+ - Initial guess "atom" due to missing basis
535
+ - Bugs of prefix ghost
536
+ - Handle duplicated primitives in GAMESS WFN writer
537
+
538
+
539
+ PySCF 1.7.1 (2020-2-29)
540
+ -----------------------
541
+ * Added
542
+ - Equilibrium solvation for TDDFT
543
+ - ddcosmo TDDFT gradients to support TDDFT geometry optimization with solvent
544
+ - Polarizable embedding solvent model
545
+ - Non-canonical MP2
546
+ - Algebraic diagrammatic construction method
547
+ * Improved
548
+ - Atomic configuration in SCF initial guess
549
+ - IBO valence space configurations
550
+ - For icmpspt restart option and default settings
551
+ - TBLIS interface and compilation configurations
552
+ - DFT-KS initialization factory functions
553
+ - reset methods in many modules for scanner mode
554
+ - HF/KS conversion functions
555
+ - APIs for HF/KS response functions (used by TDDFT and other methods)
556
+ - transform_ci function to allow projection between FCI wavefunction in
557
+ different sizes
558
+ - The fractional occupancy atomic HF method in SCF initial guess
559
+ - Performance of non-local XC functional
560
+ - FCI Performance
561
+ - stability of linear equation solver in dynamic polarizability
562
+ - cubegen for PBC systems
563
+ * Bugfix
564
+ - Contributions of MM point charges in icmpspt energy
565
+ - ROHF and UHF orbital occupancy for negative mol.spin
566
+ - Four-component Dirac HF EFG tensor
567
+ - Avoid twice initialization in modules GDF, SGX etc.
568
+ - nuclear repulsion energy for single atom case
569
+ - MINDO gradients unit (from Hartree/Angstrom to Hartree/Bohr)
570
+ - Data prefetching bug in CCSD
571
+ - Total energy of CCSD and CISD with non-canonical HF reference
572
+
573
+
574
+ PySCF 1.7.0 (2020-1-1)
575
+ ----------------------
576
+ * Added
577
+ - k-CCSD density matrix
578
+ - k-CCSD(T) with core frozen
579
+ - sgX method (a pseudo-spectral method like COSX)
580
+ - pre_kernel and post_kernel hooks in SCF driver
581
+ - Left eigenvectors of IP/EA-CCSD for molecular code
582
+ - EOM-IP/EA-KCCSD, EOM-IP/EA-KRCCSD
583
+ - Methods EOM-IP/EA-KCCSD(T) T*(a), EOM-IP/EA-KRCCSD(T) T*(a)
584
+ - kEOM-IP/EA-CCSD*
585
+ - KUMP2
586
+ - KCCSD function spatial2spin that transforms amplitudes in spatial orbital
587
+ representation to that in spin-orbital representation
588
+ - DOCI solver, DOCI-CASCI, and DOCI-CASSCf
589
+ - Support of RSH functionals in methods DF and sgX
590
+ - Add RSH functionals for all PBC DFT methods
591
+ - Semi-empirical method MINDO/3
592
+ - Analytical nuclear gradients with density-fitting
593
+ - Analytical nuclear hessian with density-fitting
594
+ - Thermo-chemistry and frequency analysis
595
+ - Huckel HF/KS initial guess
596
+ - QM/MM with implicit solvent
597
+ - Spin-Orbit ECP integrals
598
+ - Geometry optimization for state-average MCSCF method
599
+ - cube file parser
600
+ - Orbital localization methods VVO and LIVVO
601
+ * Improved
602
+ - Optimized regular get_j and density-fitting get_j
603
+ - Faster k-CCSD(T)
604
+ - Davidson diagonalization for multi-roots
605
+ - memory usage in CCSD
606
+ - Molecular orientation does not need to be changed when symmetry is enabled
607
+ - Performance of density fitting initialization
608
+ - Performance of JK-build function
609
+ - Using direct_spin1 as the default FCI solver
610
+ - Performance of SOSCF method (by using the direct-SCF technique)
611
+ - Performance of semi-incore AO-MO integral transformation
612
+ * Bugfix
613
+ - Carbon ANO data
614
+ - Initial guess for EOM-KCCSD
615
+ - state-average CASSCF analytical nuclear gradients
616
+ - ddCOSMO self-consistency (as fast solvent) for post-SCF methods
617
+ - range-separation parameter omega customization in RSH functionals
618
+
619
+
620
+ PySCF 1.6.6 (2020-1-1)
621
+ ----------------------
622
+ * Improved
623
+ - Sanity check for Wigner-Seitz cell exchange kernel
624
+ - The linear dependency treatment for X2C uncontracted basis
625
+ - Energy cutoff estimation for non-orthogonal lattice
626
+ - Tolerance in geometry when detecting point group symmetry
627
+ * Fixed
628
+ - TDDFT symmetry representation
629
+ - cube file when containing ECP
630
+
631
+
632
+ PySCF 1.6.5 (2019-11-17)
633
+ ------------------------
634
+ * Added
635
+ - spin_square method for UCCSD
636
+ * Improved
637
+ - Handling ".xc = None" (run DFT without exchange)
638
+ * Fixed
639
+ - Unit conversion bug between eV and wavenumber in TDDFT
640
+ - KGHF orbital gradients
641
+ - Analytical gradients for implicit solvent model in geometry optimization
642
+
643
+
644
+ PySCF 1.6.4 (2019-09-14)
645
+ ------------------------
646
+ * Added
647
+ - aug-cc-pwCV*Z basis
648
+ * Improved
649
+ - Memory footprint of FCI module
650
+ - Mole.spin initialization. A guess can be made for spin multiplicity based on
651
+ neutral system.
652
+ * Fixed
653
+ - PBC SCF orbital canonicalization
654
+ - Missed complex conjugation in HF/KS modules
655
+ - SHCI runtime directory
656
+ - Normalization issue for Cartesian basis in Molden output
657
+ - cc-pwCV5Z basis
658
+
659
+
660
+ PySCF 1.6.3 (2019-07-28)
661
+ ------------------------
662
+ * Added
663
+ - cube customization for cubegen
664
+ - Integral prescreening for RSH functional when evaluating K matrix
665
+ * Improved
666
+ - Performance of exchange integrals in RSH functionals
667
+ * Fixed
668
+ - handle xc = '' in eval_ao
669
+ - cube shape in cubegen
670
+ - Basis parser when parsing last elements in some basis set
671
+ - ROHF-SOSCF for diatomic molecules
672
+
673
+
674
+ PySCF 1.6.2 (2019-6-17)
675
+ -----------------------
676
+ * Added
677
+ - Slow version of KTDSCF and KGW methods for molecular systems
678
+ - Slow version of TDSCF and GW methods for PBC systems
679
+ - The support of various dtype (int, complex etc.) in numpy_helper functions
680
+ - Point group symmetry conservation in geometry optimization
681
+ * Improved
682
+ - DFHF class structure and method hooks
683
+ - Sanity checks when saving and loading FCIDUMP file
684
+ - Integral performance for solvent model
685
+ - Integral performance for QM/MM interface
686
+ - GCC 9 compatibility
687
+ * Bugfix
688
+ - Cartesian GTOs was not handled in RSH integrals
689
+ - geometric_solver for latest geomeTRIC release
690
+ - Initial guess of orbital localization solver
691
+ - MCSCF analyze function for state-averaged calculations
692
+ - The zero-norm bug in the non-hermitian matrix diagonalization function when
693
+ solving the complex eigenvectors for real eigenvalues.
694
+ - IOError when reading initial guess from chkfile in SCF scanner function
695
+
696
+
697
+ PySCF 1.6.1 (2019-03-15)
698
+ ------------------------
699
+ * Added
700
+ - k-point orbitals to gamma-point orbitals transformation function k2gamma
701
+ - Wigner D-matrix and d-matrix
702
+ - The interface geometric_solver to geometry optimization library geomeTRIC
703
+ - k-CCSD(T) for PBC k-point sampled systems
704
+ - AO basis truncation shortcut "@?s?p?d"
705
+ - Function in basis parser to restore general basis contraction from NWChem
706
+ optimized format
707
+ - inertia_moment function in Mole object
708
+ - keyword resolution in CHGCAR writer
709
+ - IAO for each k-point in PBC systems
710
+ * Improved
711
+ - Geometry optimization module (GeometryOptimizer class, output format etc.)
712
+ - SCF Gradients class. A hook "extra_force" was added.
713
+ - MRLCC2 interface
714
+ - Import gradients, properties, solvent, and all post-SCF/extended methods in SCF class
715
+ - DFT-D3 interface
716
+ - Pople basis parser (supporting e.g. 6311++g(2d,p)).
717
+ - Normalizing SCF initial guess in PBC (to the right number of electrons/cell)
718
+ - mesh estimation for inf-vacuum
719
+ - Tuned threshold in point group symmetry detection functions
720
+ - SCF summary in the output message
721
+ * Bugfix
722
+ - Solvent object initialization in SCF scanner function
723
+ - GHF get_jk function
724
+ - QM/MM object initialization in SCF scanner function
725
+ - Missing virtual orbitals in MCSCF project_init_guess function
726
+ - MINAO basis data
727
+ - Analytical Fourier transform zero elements when basis functions do not overlap
728
+ - make_rdm1 function in state_average mcscf wrapper
729
+
730
+
731
+ PySCF 1.6 (2018-12-31)
732
+ ----------------------
733
+ * Added
734
+ - DFT-D3 interface
735
+ - semi_incore ao2mo transformation
736
+ * Improved
737
+ - Linear dependency threshold of qr decomposition in davidson solver
738
+ - Optimized KUCCSD, EOM-KUCCSD performance
739
+ * Bugfix
740
+ - hasattr issue for attributes with @property
741
+ - DDCOSMO wrapper and kernel function
742
+ - Num eletrons bug in PBC smearing function for custom systems
743
+ - return value of NPTaggedArray ufunc (returning np array now)
744
+ - PBC density fitting dimension error caused by numerical noise when handling linear dependency
745
+ - Parsers for molpro basis and gaussian basis
746
+ - Selected-CI returned data type
747
+
748
+
749
+ PySCF 1.6 beta (2018-11-26)
750
+ ---------------------------
751
+ * Added
752
+ - PBC k-point SCF stability analysis
753
+ - PBC KUCCSD
754
+ - PBC EOM-IP/EA-KRCCSD
755
+ - PBC EOM-IP/EA-KUCCSD
756
+ - Non-relativistic static and dynamic polarizability and hyper-polarizability tensor
757
+ * Improved
758
+ - The treatment of HF exchange in PBC system when calling PBC MP2, CISD, CCSD code
759
+ - Convergence performance of KCCSD iterations for low-dimension systems
760
+ * Bugfix
761
+ - Complex density in pbc.get_j function
762
+
763
+
764
+ PySCF 1.6 alpha (2018-08-15)
765
+ ----------------------------
766
+ * Added
767
+ - X2C-UKS (LDA functional only)
768
+ - PBC gamma point ROHF/ROKS and GKS
769
+ - PBC KROHF/KROKS and KGKS for k-point sampling
770
+ - DFT Coulomb and XC integrals with multigrid
771
+ - Periodic UCCSD with k-point sampling
772
+ - perturbative DMRG method
773
+ - Interface to Cornell SHCI
774
+ - PBC dipole memont and Makov-Payne correction
775
+ - Overlap of two CISD wavefunctions
776
+ - EFG and Mossbauer spectroscopy of crystal and molecule
777
+ - Molecular magnetizability for HF and DFT
778
+ - ddCOSMO and ddPCM for MCSCF, MP, CI and CC methods
779
+ * Improved
780
+ - numint performance (eval_rho, eval_mat)
781
+ - Energy cutoff estimation
782
+ - CCSD convergency for 2D-PBC AFTDF, GDF and MDF methods
783
+ - Integral transformation performance in GW
784
+
785
+
786
+ PySCF 1.5.5 (2018-12-31)
787
+ ------------------------
788
+ * Improved
789
+ - Fix symmetrization for k-point density in pbc.dft.numint.
790
+ - Molden parser to handle UHF orbitals
791
+ * Bugfix
792
+ - Get_fermi in KHF and KUHF
793
+ - Execute call in dmrgci
794
+ - Directories and paths in dmrgci
795
+ - Read of 3-pdm and 4-pdm produced by block-1.5
796
+ - Initialization wrapper in pbc.scf.__init__
797
+ - Complex density in pbc.get_j function
798
+ - Initial guess of KROHF method
799
+ - PBC get_jk interface when calling molecular MCSCF with pbc scf object
800
+ - keyword argument with_df of pbc.dft density_fit wrapper
801
+
802
+
803
+ PySCF 1.5.4 (2018-11-16)
804
+ ------------------------
805
+ * Improved
806
+ - Add support for GTH pseudopotentials beyond d electrons
807
+ - Data structure of TDDFT response amplitudes (X, Y vectors): X[nvir,nocc] -> X[nocc,nvir]
808
+ * Bugfix
809
+ - OpenMP race condition in FCI solver
810
+ - Undefined HDF5 dataset in PBC MDF initialization
811
+ - TD-KRHF vind function
812
+ - SCF hessian
813
+ - interface between DMRG-CI and DMRG-NEVPT2. Making DMRG-NEVPT2 read Block
814
+ code settings in DMRG-CI.
815
+ - Dimension error in pbc.fftdf.get_jk for KUHF density matrix
816
+ - pbc.mpicc for keyword frozen
817
+ - Periodic pseudopotential calculations with ghost atoms
818
+
819
+
820
+ PySCF 1.5.3 (2018-09-06)
821
+ ------------------------
822
+ * Bugfix
823
+ - get_jk prescreen for non-hermitian density matrices.
824
+ - Inaccurate estimation of memory usage in ccsd rdm.
825
+ - Frozen orbital EA-EOM-KRCCSD
826
+ - IOError due to 4GB chunk size limit in HDF5 library
827
+
828
+
829
+ PySCF 1.5.2 (2018-08-15)
830
+ ------------------------
831
+ * Improved
832
+ - IO performance of pbc.GDF initialization
833
+ - Default linear dependence treatment in GDF to improve accuracy
834
+ * Bugfix
835
+ - Selected-ci 2-particle density matrices for two electron systems
836
+
837
+
838
+ PySCF 1.5.1 (2018-07-01)
839
+ ------------------------
840
+ * Improved
841
+ - The memory usage for a large number of MM particles (issue #193)
842
+ * Bugfix
843
+ - Frozen orbitals in MCSCF canonicalization
844
+ - Dimension error when initializing DF-CCSD integral tensor
845
+ - EOM-EE-UCCSD initial guess and intermediates (issue #199)
846
+ - mpi ip/eaccsd w/ frozen orbitals
847
+ - the tdscf.get_nto function when mol.symmetry is enabled (issue #196)
848
+ - the interface between QMMM wrapper and the gradients of post-HF methods
849
+
850
+
851
+ PySCF 1.5 (2018-06-08)
852
+ ----------------------
853
+ * Added
854
+ - Fake PySCF method adapter for arbitrary energy/gradients function in
855
+ berny_solver wrapper
856
+ - Function to restore DIIS object from DIIS file
857
+ - Restart function to restore CCSD calculations
858
+ * Improved
859
+ - CASSCF optimization step size
860
+ - State-averaged CASSCF output message
861
+ - RCCSD(T) and UCCSD(T) performance
862
+ - Reduced DIIS memory footprint
863
+ - Frozen orbitals for KRCCSD
864
+ - PBC-TDDFT eigenvalue filter to keeps more eigenvalues which has small
865
+ imaginary part
866
+ - FCI convergence tolerance
867
+ - Conversion between KRHF, KUHF, and KGHF
868
+ - In the SOSCF solver, the diagonalization code to handle singularity in Hessian
869
+ - In the Scanner function, to support an input of geometry (string or list)
870
+ - SCF convergence hook
871
+ - Density_fit hooks in mp2, cisd, and ccsd modules
872
+ - Warning for gapless system in ccsd
873
+ - Energy cutoff for PBC GDF method.
874
+ - XC functional parser to support '-' in XC name and XC functional
875
+ abbreviations (SVWN, BLYP, PBE, M05, etc.)
876
+ - Orbital frozen in core and virtual space for KMP2 and KCCSD modules
877
+ * Bugfix
878
+ - The ghost atom is now treated as a regular atom in berny_solver wrapper.
879
+ - QM/MM nuclear gradients
880
+ - Updating 6-31+G* basis which is now equivalent to the EMSL published basis
881
+ - Symmetry detection code to discover D2d, D4d, D6d group
882
+ - xcfun O3LYP functional which is now the same to libxc definition (but
883
+ different to the equation in the original paper)
884
+ - xcfun cam-b3lyp functional interface
885
+ - HCI wrapper to handle the system without beta electrons
886
+ - Dimension error for spinor integrals in general JK-build function
887
+ - The orbital ordering of the returned orbitals of the UHF stability analysis
888
+ - Filling up the upper triangular part for symmetry Hamiltonian in fcidump.read
889
+ - The attributes kpts and kpt of PBC SCF class when SCF data are loaded from
890
+ chkfile
891
+ - Nuclear Hessian in ECP and all-electron mixed systems
892
+ - Natural orbitals of state-averaged CASSCF
893
+
894
+
895
+ PySCF 1.5 beta (2018-04-15)
896
+ ---------------------------
897
+ * Added
898
+ - ddCOSMO analytical nuclear gradients
899
+ - TDA and TDDFT analytical nuclear gradients for UHF and UKS
900
+ - CISD/GCISD/UCISD 1-particle transition density matrix
901
+ * Improved
902
+ - Memory usage of KRHF-KCCSD and IP/EA-EOM-KCCSD
903
+ * Bugfix
904
+ - Fock matrix of ddCOSMO and ddPCM method.
905
+
906
+
907
+ PySCF 1.5 alpha (2018-03-21)
908
+ ----------------------------
909
+ * Added
910
+ - ddCOSMO solvent model
911
+ - VV10 NLC functional for molecule
912
+ - range-separated hybrid features for RKS and UKS, including
913
+ > Analytical nuclear gradients
914
+ > Second order SCF
915
+ > Hessian and frequency
916
+ > TDDFT
917
+ > TDDFT gradients
918
+ > NMR
919
+ - IAO and IBO for molecular and PBC systems
920
+ - UHF analytical nuclear Hessian
921
+ - UKS analytical nuclear Hessian
922
+ - FFT for low-dimension (2D) PBC systems
923
+ - Generalized CCSD (GCCSD)
924
+ - Generalized CCSD lambda solver
925
+ - Generalized Hartree-Fock with PBC
926
+ - PBC GCCSD and RCCSD with k-point sampling
927
+ - PBC GCCSD(T) and RCCSD(T) with k-point sampling
928
+ - RCCSD(T) and UCCSD(T) for non-canonical HF orbitals
929
+ - RCISD and UCISD analytical nuclear gradients
930
+ - RCISD, UCISD analytical nuclear gradients for excited states
931
+ - RMP2 and UMP2 analytical nuclear gradients
932
+ - UCCSD analytical nuclear gradients
933
+ - Frozen orbitals in MP2, CISD, CCSD, CCSD(T) nuclear gradients
934
+ - SF-X2C-1E analytical nuclear gradients
935
+ - SF-X2C-1E analytical nuclear hessian
936
+ - Analytical nuclear gradients and hessian for ECP integrals
937
+ - GIAO-ECP integrals for NMR shielding
938
+ - Interface to pyWannier90
939
+ - Restricted MP2 with k-point sampling
940
+ - RCCSD(T), UCCSD(T) and GCCSD(T) 1-particle and 2-particle density matrices
941
+ - RCCSD(T), UCCSD(T) analytical nuclear gradients
942
+ - CASCI/CASSCF analytical nuclear gradients
943
+ - CASCI analytical nuclear gradients for excited states
944
+ - Cartesian GTO (6d 10f) basis in PBC calculations
945
+ - Natural transition orbital analysis
946
+ - direct-RPA (no exchange, aka TDH)
947
+ - direct-TDA (TDA without exchange)
948
+ - Function to set OpenMP threads
949
+ * Improved
950
+ - Independent OpenMP threads in FCI solver
951
+ - Supported even number of grids in pbc calculations
952
+ - Performance of UCCSD lambda solver
953
+ - The function to get SCF initial guess from the chkfile of the molecule with
954
+ different geometry
955
+ - The mcscf natural orbitals in the state-average calculation
956
+ - Performance of ECP integrals
957
+ - Prescreening for PBC 3-center integrals
958
+ - Performance and memory efficiency of G0W0
959
+ - KMP2 memory efficiency
960
+ - Efficiency to evaluate the value of periodic AO on grids
961
+ - libxc parser to support the customized Range-separated XC functionals
962
+
963
+
964
+ PySCF 1.4.7 (2018-04-15)
965
+ ------------------------
966
+ * Bugfix
967
+ - Outcore ao2mo transform when basis functions are cartesian Gaussians
968
+ - Fix errors in dmrg-nevpt interface, which overwrite nevpt configure files by
969
+ variational dmrg configure files.
970
+ - The order of elements of a list that are loaded by chkfile.load
971
+
972
+
973
+ PySCF 1.4.6 (2018-04-02)
974
+ ------------------------
975
+ * Added
976
+ dip_moment method for ROHF class
977
+
978
+
979
+ PySCF 1.4.5 (2018-03-23)
980
+ ------------------------
981
+ * Bugfix
982
+ - Numerical grids not converged in ECP integrals
983
+ - Python3 compatibility in shci module
984
+
985
+
986
+ PySCF 1.4.4 (2018-03-20)
987
+ ------------------------
988
+ * Improved
989
+ - Non-Hermitian matrix diagonalization
990
+ - Symmetric grids in cubegen
991
+ - FCI initial guess when the system has Dooh or Doov symmetry
992
+ - Using stable sort when sorting orbital energies
993
+ - Attribute "e_tot" in the MP2 methods to access the total energy
994
+ * Bugfix
995
+ - meta-GGA density in dft.numint.eval_rho2
996
+ - intor parser in ao2mo module
997
+ - ecp parser if ecp data not found
998
+ - 1-electron system for UCCSD
999
+ - Python-3 compatibility for dmrgscf module
1000
+ - Handling the errors which were raised in the background threads
1001
+ - UHF/ROHF density matrices in nao localization method
1002
+
1003
+
1004
+ PySCF 1.4.3 (2018-01-17)
1005
+ ------------------------
1006
+ * Improved
1007
+ - Assert convergence in geometry optimization
1008
+ - Initial guess in SCF PES scanning
1009
+ - Memory usage for generating Becke-grids in DFT
1010
+ * Bugfix
1011
+ - XC parser to support the scaled compound functional
1012
+ - In the second order SCF algorithm, removing level_shift
1013
+ - k-point RCCSD for non-canonical HF reference
1014
+ - ECP integrals
1015
+
1016
+
1017
+ PySCF 1.4.2 (2017-12-06)
1018
+ ------------------------
1019
+ * Added
1020
+ - Frank Jensen, Polarization consistent basis sets
1021
+ * Improved
1022
+ - Memory usage of pbc KHF calculation when HF exchange is computed with FFTDF
1023
+ * Bugfix
1024
+ - pyberny interface
1025
+ - PBC GDF initialization for hybrid functional
1026
+ - guess of wfn symmetry for given fci wfn
1027
+ - Entropy of Gaussian smearing
1028
+
1029
+
1030
+ PySCF 1.4.1 (2017-11-12)
1031
+ ------------------------
1032
+ * Bugfix
1033
+ - meta-GGA functional detection code in XC parser
1034
+ - Orbital symmetry label in mcscf initial guess projection
1035
+ - Eigenvalue ordering for Davidson eigen solver
1036
+ - Madelung constant of non-orthogonal lattice
1037
+ - Convergence of Madelung constant for huge number of k-points samples
1038
+ - basis parser for pople-type basis
1039
+ - RCCSD when running large number of virtual orbitals on small memory machine
1040
+
1041
+ PySCF 1.4 (2017-10-05)
1042
+ ----------------------
1043
+ * Improved
1044
+ - Kinetic energy cutoff estimation
1045
+ - Density fitting default auxiliary basis
1046
+ - Memory usage for FFTDF module
1047
+ - libxc interface
1048
+ * Bugfix
1049
+ - KUHF dimension error in smearing function
1050
+ - SCF results inconsistency in chkfile and SOSCF solver
1051
+ - OMP stack overflow in GTO basis evaluator
1052
+ - Default grids in DFT gen_grid function for system with ECP/PP
1053
+ - mol.intor function to generate STG and YP integrals in 8-fold symmetry
1054
+ - TDDFT analytical gradients
1055
+ - DMRG-CI runtime scratch path
1056
+ - PBC GDF integrals for auxiliary basis with g functions
1057
+ - post-HF initialization function when mean-field object is DF-SOSCF method
1058
+ - Single orbital localization
1059
+ - Race condition in MP2 IO
1060
+
1061
+
1062
+ PySCF 1.4 beta (2017-08-22)
1063
+ ---------------------------
1064
+ * Added
1065
+ - Generalized Hartree-Fock (GHF)
1066
+ - Second order SCF solver for GHF
1067
+ - non-relativistic UHF, UKS g-tensor (with various SOC approximations)
1068
+ - non-relativistic UHF, UKS hyperfine coupling
1069
+ - SHCI interface to Dice program
1070
+ - spin-orbital CISD
1071
+ - UCISD and UCISD 1- and 2-RDM
1072
+ - Restricted CC2 method
1073
+ - Density-fitting CCSD
1074
+ - Heat-bath selected CI (HCI) spin-orbital 1- and 2-RDM
1075
+ - "scanner" function for HF, DFT and CCSD to simplify energy or
1076
+ gradients scanning for systems of different geometry.
1077
+ - Interface to pyberny geometry optimizer (geometry optimization for
1078
+ RHF, RKS and RCCSD are supported).
1079
+ * Improved
1080
+ - U-CCSD(T) performance
1081
+ - Package structure (following "The Hitchhiker's Guide to Python")
1082
+ - ECP basis localization in Mulliken pop analysis
1083
+ - Changing the CASCI/CASSCF default FCI solver (the default solver will not
1084
+ use spin symmetry for singlet state)
1085
+ - Supporting remove_linear_dep function to handle basis linear dependence in
1086
+ k-point SCF
1087
+ - cell.rcut estimation for better integral accuracy
1088
+ - Convergence rates of PM localization
1089
+ - MP2 and RCISD integral transformation performance
1090
+ - Disk usage of CCSD-DIIS
1091
+ - Input basis parser to support union basis set (eg mol.basis=(bas1,bas2))
1092
+ - SCF initial guess for systems with pseudopotential (or ECP)
1093
+ - SCF initial guess for low-dimension PBC systems
1094
+ * Bugfix
1095
+ - wfnsym of FCI solver for Dooh symmetry
1096
+ - In CIAH newton solver, the special treatment of negative hessian has
1097
+ been revised.
1098
+ - import lock which freezes threads for functions running in background
1099
+
1100
+
1101
+ PySCF 1.4 alpha (2017-07-24)
1102
+ ----------------------------
1103
+ * Added
1104
+ - General function to evaluate Spinor GTO on real space grids
1105
+ - Dirac-Kohn-Sham (LDA functional)
1106
+ - EDIIS and ADIIS
1107
+ - Periodic CCSD with k-point sampling
1108
+ - Periodic EOM-IP-CCSD and EOM-EA-CCSD for single k-point calculation
1109
+ - spin-square value (per unit cell) of KUHF calculation
1110
+ - Update interface to fciqmc for standalone executing
1111
+ - Routines in fciqmc to read in the spinned one and two RDMs
1112
+ - Heat-Bath CI
1113
+ - Functions in dmrgci interface to access 3-pdm and 4-pdm
1114
+ - Function get_fermi
1115
+ - UCCSD lambda equation and 1,2-particle density matrix
1116
+ - SCF wfn stability analysis
1117
+ - Many-Body van der Waals Interactions (MBD)
1118
+ - Second order SCF solver for periodic HF and DFT
1119
+ - TDDFT for periodic k-point HF and DFT
1120
+ - U-TDHF and U-TDDFT for molecular and crystal systems
1121
+ - Many-body dispersion
1122
+ - MP2-F12 and F12 basis and F12 RI basis
1123
+ - Cartesian GTO (6d 10f) basis in molecular calculations
1124
+ - CP2K's HF pseudopotential data
1125
+ - Frozen core MP2
1126
+ - Molecular electrostatic potential (MEP)
1127
+ - CPHF and UCPHF solver
1128
+ - Non-relativistic RHF, UHF 4-component UHF spin-spin coupling
1129
+ - non-relativistic UHF, 4-component UHF g-tensor (in testing)
1130
+ - non-relativistic UHF, 4-component UHF hyperfine coupling (in testing)
1131
+ - non-relativistic UHF zero-field splitting (in testing)
1132
+ * Improved
1133
+ - Performance of PBC-Gaussian function evaluator
1134
+ - Performance of analytical Fourier transformation for AO product
1135
+ - Performance of PBC 3-center integrals
1136
+ - Performance of PBC PP local-part integrals
1137
+ - Numerical stability associated to OpenMP reduce function
1138
+ - Performance of FCI 2-electron contraction function
1139
+ - Basis parser for Pople style basis sets
1140
+ - Arbitrary problem size in FCI solver
1141
+ - Symmetry labels in orbital coefficients
1142
+ - Disk usage of integral transformation in MP2
1143
+ - Performance of J/K contractions in molecular density fitting code
1144
+ - Input geometry parser for ghost atoms
1145
+ * Bugfix
1146
+ - PBC super cell function. Atoms was missing on the super cell boundary
1147
+ - PBC dft atomic grids for low-dimension systems
1148
+ - The missing occ-vir blocks of Fock matrix in UCCSD
1149
+ - MGGA integration error
1150
+ * Removed
1151
+ - Dependence to joblib library
1152
+
1153
+
1154
+ PySCF 1.3.5 (2017-08-11)
1155
+ ------------------------
1156
+ * Bugfix
1157
+ - The undefined += operation (numpy issue #5241) in CISD and CCSD methods
1158
+
1159
+
1160
+ PySCF 1.3.4 (2017-08-08)
1161
+ ------------------------
1162
+ * Improvements
1163
+ - Handle ghost atom in HF initial guess.
1164
+ - Remove special treatments on CIAH negative hessians which often cause convergence problem
1165
+ - Memory usage in CISD
1166
+ - Proper treatment of ECP/PP in Mulliken pop analysis
1167
+ * Bugfix
1168
+ - For ROHF reference, CCSD function takes UCCSD method.
1169
+ - Handle zero beta electrons in UCCSD.
1170
+ - Fix bug in FCI solver when system has Dooh symmetry.
1171
+ - Fix bug in KUHF gradients which affects newton SCF convergence.
1172
+ - Fix bug in gradients of PM localization which affects convergence.
1173
+ - Fix "hcore" initial guess for KHF.
1174
+ - Fix bug in Mulliken pop analysis caused by wrong overlap matrix for PBC calculations.
1175
+
1176
+
1177
+ PySCF 1.3.3 (2017-07-05)
1178
+ ------------------------
1179
+ * Bugfix
1180
+ - GIAO contributions to the off diagonal part of NMR shielding tensor.
1181
+ - Handle zero core electrons in ECP parser.
1182
+ - Handle zero occupied orbitals in CCSD module.
1183
+ - Handle 1-electron system in UHF.
1184
+ - Fix orbital ordering in SCF canonicalization when point group symmetry is used.
1185
+ - Fix the missing fov term in UCCSD intermediates.
1186
+ - Fix pbc atomic grids for low dimensional system.
1187
+ - Avoid negative hessian in second order SCF solver.
1188
+ - Fix bug in fci solver when system has cylinder spatial symmetry
1189
+ - Fix eval_rho for GGA functional for non-hermitian density matrix
1190
+
1191
+
1192
+ PySCF 1.3.2 (2017-06-05)
1193
+ ------------------------
1194
+ * Bugfix
1195
+ - CCSD frozen core when using AO-driven algorithm
1196
+ - DFT UKS orbital hessian
1197
+ - PBC gamma-point UHF exxdiv=ewald correction
1198
+ - KUHF get_bands function
1199
+
1200
+
1201
+ PySCF 1.3.1 (2017-05-14)
1202
+ ------------------------
1203
+ * Bugfix
1204
+ - CISD output message for multiple roots
1205
+ - UHF hessian function in the second order SCF solver
1206
+ - Integer overflow in npdot
1207
+ - Module import error in PBC second order SCF solver
1208
+ - Update makefile due to the bugfix in libcint library
1209
+
1210
+
1211
+ PySCF 1.3 (2017-04-25)
1212
+ ----------------------
1213
+ * Improved
1214
+ - Treatment of auxiliary basis linear dependence in PBC DF/MDF module
1215
+ - Cutoff radius in real space lattice summation for better accuracy
1216
+ - PBC get_bands to compute the bands of arbitrary input k-points
1217
+ - Ewald sum convergence
1218
+ - Atomic grids in PBC DFT calculation
1219
+ * Bugfix
1220
+ - Analytical Fourier transformation for non-orthogonal lattice
1221
+ - Spinor integral buffer size when kappa!=0
1222
+ - AVAS active space when mol.symmetry is enabled
1223
+ - Input parser for Gaussian nuclear model
1224
+ - Sorting CISD RDM2 in Chemist's ordering
1225
+ - runtimeDir in dmrg interface
1226
+ - numpy.exp overflow in PBC smearing function
1227
+ - The FFT-based MO integrals in compressed format
1228
+ - Input parser to handle unicode
1229
+ - UHF spin-square function for complex orbitals
1230
+ - Setfault in FCI 4-particle transition density matrix
1231
+ * Removed
1232
+ - The cache of PBC AO value on grids
1233
+ - Split-fitting MDF module
1234
+
1235
+
1236
+ PySCF 1.3 beta (2017-02-15)
1237
+ ---------------------------
1238
+ * Added
1239
+ - sf-X2C for PBC Hamiltonian
1240
+ - Overlap of two CI wavefunctions over different orbital bases
1241
+ - EOM-CCSD for user guess, Koopmans' excitations, etc
1242
+ - Approximate EOM-CCSD (MBPT2 ground state and partitioned EOM Hbar)
1243
+ - AVAS method for constructing mcscf active space
1244
+ - Molpro XML file reader and interface to read Molpro orbitals
1245
+ - UCCSD
1246
+ * Improved
1247
+ - EOM-EE-RCCSD and EOM-EE-UCCSD performance
1248
+ - memory usage of the non-symmetric Davidson solver in EOM-CCSD
1249
+
1250
+
1251
+ PySCF 1.3 alpha-2 (2017-01-04)
1252
+ ------------------------------
1253
+ * Added
1254
+ - Supports for 1D, 2D PBC systems
1255
+ * Improved
1256
+ - Integral transformation for PBC 2-electron integrals
1257
+ - CASSCF state-average interface to handle sub-solvers of different spins
1258
+ - Numerical stability for Davidson diagonalization solver
1259
+ - Numerical stability of FCI contraction function under multithreading environment
1260
+ - FCI 2-electron contraction function with point group symmetry
1261
+ * Bugfix
1262
+ - X2C to use custom basis for X matrix
1263
+
1264
+
1265
+ PySCF 1.3 alpha-1 (2016-12-04)
1266
+ ------------------------------
1267
+ * Added
1268
+ - Quantum chemistry ECP for solid
1269
+ - AO-direct RCCSD
1270
+ - CI coefficients transformation for one-particle basis rotation
1271
+ - CIAH second order SCF solver for PBC KRHF and KUHF methods
1272
+ - CISD and CISD 1, 2-particle density matrices
1273
+ - Selected-CI and Selected-CI 1, 2-particle density matrices
1274
+ - Smearing for PBC mean-field calculation
1275
+ - PBC density fitting
1276
+ * Improved
1277
+ - Performance of CCSD(T)
1278
+ - Change the default kpts mesh (to always include gamma point)
1279
+ - PBC repeated images used by lattice summation
1280
+
1281
+
1282
+ PySCF 1.2.3 (2017-04-24)
1283
+ ------------------------
1284
+ * Bugfix
1285
+ - PBC 2e integrals for wrap-around k-points
1286
+ - CI coefficients in GAMESS WFN format
1287
+ - Input parser for Gaussian nuclear model
1288
+ - Density fitting outcore module for user input auxiliary basis
1289
+
1290
+
1291
+ PySCF 1.2.2 (2017-02-15)
1292
+ ------------------------
1293
+ * Bugfix
1294
+ - GTO normalization in molden file
1295
+ - multi-threading dgemm
1296
+
1297
+
1298
+ PySCF 1.2.1 (2017-01-26)
1299
+ ------------------------
1300
+ * Added
1301
+ - transition metal BFD basis
1302
+ - script to fix dylib library dependence for Mac
1303
+ * Bugfix
1304
+ - active space 1pdm in mc chkfile if natural orbitals are required
1305
+ - dmrg example
1306
+ - state-average dmrgci interface
1307
+ - analytic GTO-PW integral
1308
+ - for population analysis when ecp is presented.
1309
+ - for mcscf state-specific function to support ground state as the target state
1310
+ - get_coulG round-off bug
1311
+ - unit cell size estimation for non-orth crystals
1312
+ - lib.norm function for complex vector
1313
+
1314
+
1315
+ PySCF 1.2 (2016-11-07)
1316
+ ----------------------
1317
+
1318
+
1319
+ PySCF 1.2 beta (2016-09-13)
1320
+ ---------------------------
1321
+ * Added
1322
+ - State average CASSCF helper function for mixed spin/spatial-symmetry FCI solvers
1323
+ - Example for transition dipole momentum
1324
+ - U-CCSD (based on spin-orbital formulation)
1325
+ - IP/EA/EE-EOM-CCSD
1326
+ - Function to dump CASSCF canonical orbitals in molden format
1327
+ - Analytical Fourier transformation for AO and AO product
1328
+ - Co-iterative augmented hessian (CIAH) orbital optimizer
1329
+ - Optimized einsum function using numpy.tensordot function
1330
+ - Burkatzi-Filippi-Dolg pseudo potential
1331
+ - FCI solver to support integrals which do not have 8-fold symmetry
1332
+ - Dual interface to call pyFFTW or numpy.fft
1333
+ - Maximum overlap method (MOM) method for SCF method
1334
+ * Improved
1335
+ - Memory usage for MDF method (molecular and PBC systems)
1336
+ - PBC AO value evaluation performance
1337
+ - Orbitals space symmetrization
1338
+ - CASSCF subspace (core, active, external) symmetrization
1339
+ - Created X2C object to hold X2C functions and parameters
1340
+ - Boys, Edmiston, Pipek-Mezey Localization with general CIAH optimizer
1341
+ - PBC integrals to handle ghost atom in PBC calculation
1342
+ - Asynchronized IO to overlap integration and IO for ao2mo integral transformation
1343
+ - SCF gradients to eliminate the symmetry forbidden matrix elements
1344
+ - Fixing orbital ordering for degenerated SCF orbitals
1345
+ - Efficiency of transpose_sum function
1346
+ - FCIDUMP output format
1347
+ * Bugfix
1348
+ - CASSCF/QMMM interface for the missing term in nuclear repulsion
1349
+ - Screening small density for MGGA functionals
1350
+ - Molden interface to handle symmetry broken orbitals
1351
+ - MP2 density matrix to include HF DM
1352
+
1353
+
1354
+ PySCF 1.2 alpha (2016-8-5)
1355
+ --------------------------
1356
+ * Added
1357
+ - MDF (mixed density fitting) method for molecule and PBC 2-election integrals
1358
+ - GAMESS WFN wirter
1359
+ - Periodic boundary condition (PBC) for gamma point RHF, UHF, RKS, UKS
1360
+ - PBC RHF, UHF, RKS, UKS with k-point sampling
1361
+ - PBC AO integrals
1362
+ - PBC MO integral transformation
1363
+ - PBC density fitting
1364
+ - IC-MPS-PT2
1365
+ - DMET decomposition to generate CASSCF active space
1366
+ - FCI electron-phonon coupling solver
1367
+ - meta-GGA for ground state DFT
1368
+
1369
+
1370
+ Version 1.1 (2016-6-4):
1371
+ * Improved
1372
+ - "unc-" prefix for uncontracted basis in the input
1373
+ - linear dependence problem in mcscf.project_init_guess
1374
+ * Bugfix
1375
+ - CCSD(T) rdm
1376
+ - CASCI.analyze for multiple CI roots
1377
+ - function to write FCIDUMP when system has symmetry
1378
+
1379
+
1380
+ Version 1.1 beta (2016-4-11):
1381
+ * Added
1382
+ - Orbital hessian for SCF Newton solver
1383
+ - (maximum overlap method) for Delta SCF
1384
+ - determinant overlap
1385
+ - Canonicalization flag for Newton solver
1386
+ * Improved
1387
+ - Default density fitting basis for heavy atoms
1388
+ - Density fitting MCSCF to allow inputing 3-center integrals
1389
+ - Rewriting NEVPT2 interface
1390
+ - Mole object serialization with json
1391
+ - Orbital energy output format for ROHF
1392
+ * Bugfix
1393
+ - meta-lowdin orthogonalization for high angular memontum basis
1394
+ - Orbital occupancy for ROHF with symmetry
1395
+ - CASSCF initializing from x2c-UHF
1396
+ - ECP accuracy
1397
+ - QMMM interface
1398
+
1399
+
1400
+ Version 1.1 alpha-2 (2016-3-8):
1401
+ * Added
1402
+ - CCSD(T) and CCSD(T) gradients
1403
+ - General JK contraction function
1404
+ - RHF analytical nuclear Hessian
1405
+ - RKS analytical nuclear Hessian
1406
+ - Function to symmetrize given orbital space
1407
+ - General XC functional evaluator (using Libxc or Xcfun)
1408
+ - Intrinsic Atomic Orbital (IAO)
1409
+ * Improved
1410
+ - NEVPT interface
1411
+ - Default DFT pruning scheme
1412
+ - Improving linear dependence issue for X2C module
1413
+ * Bugfix
1414
+ - CCSD density matrix
1415
+ - Atomic radii for DFT grids
1416
+ - Handling h function for molden
1417
+ - Projecting CASSCF initial guess from orbitals of different shape
1418
+
1419
+ Version 1.1 alpha-1 (2016-2-8):
1420
+ * Added
1421
+ - CCSD gradients
1422
+ - DMRG-NEVPT2 interface
1423
+ - DFT gradients
1424
+ - TDDFT and TDDFT gradients
1425
+ - DFT NMR
1426
+ - QM/MM interface
1427
+ - Pipek-Mezey localization
1428
+ - DF-CASSCF
1429
+ - State-specific CASSCF for excited states
1430
+ - Stream operations: apply, run, set
1431
+ - General basis value evaluator
1432
+ - DMRG (Block) examples
1433
+ * Improved
1434
+ - Default DFT grids schemes (grid density, prune etc)
1435
+
1436
+
1437
+ Version 1.0 (2015-10-8):
1438
+ * 1.0 Release
1439
+
1440
+ Version 1.0 rc (2015-9-7):
1441
+ * Add examples
1442
+ * Add documents
1443
+ * Optimize CCSD lambda solver and CCSD density matrix
1444
+ * Optimize Boys localization.
1445
+ * Tune CASSCF solver parameters
1446
+ * Bug fixing for mcscf, localizer, nevpt2 and dft modules
1447
+
1448
+ Version 1.0 beta (2015-8-2):
1449
+ * FCI spin eigen function
1450
+ * Add state-average CASSCF
1451
+ * CCSD lambda equation and density matrix
1452
+
1453
+ Version 1.0 alpha 2 (2015-7-3):
1454
+ * Optimize HF J K contraction
1455
+ * MP2 2 particle density matrix
1456
+ * Default population analysis with meta-Lowdin orthogonalized AO
1457
+ * Update FCI to handle more than 23 orbitals
1458
+ * Multiple roots for FCI solver
1459
+ * Optimize MCSCF convergence
1460
+ * FCI/MCSCF wave function symmetry
1461
+ * Z-matrix input
1462
+ * Add chkfile_util script to analyze calculation on the fly
1463
+ * CI determinants overlap
1464
+ * Fix DIIS bug
1465
+
1466
+ Version 1.0-alpha (2015-4-7):
1467
+ * D{\infty}h and C{\infty}v
1468
+ * Fix bug in DFT screening functions
1469
+
1470
+ Version 0.11 (2015-3-6):
1471
+ * Remove redundant module fci.direct_ms0
1472
+ * Update the point group symmetry detect function
1473
+ * Optimized DFT grids
1474
+ * NEVPT2 (By S. Guo)
1475
+ * X2C-1e HF
1476
+ * Boys localization (By S. Wouters)
1477
+ * Edmiston-Ruedenberg localization (By S. Wouters)
1478
+ * Density fitting CASSCF
1479
+
1480
+ Version 0.10 (2015-2-4):
1481
+ * Refactoring:
1482
+ - Expose class member functions to module level
1483
+ - Rename member function of class Mole,
1484
+ xxx_of_atm -> atom_xxx, xxx_of_bas -> bas_xxx
1485
+ - Rename scf.hf.scf_cycle to scf.hf.kernel
1486
+ - Rename conv_threshold to conv_tol
1487
+ - Rename hf.calc_tot_elec_energy to hf.energy_tot
1488
+ - Rename hf.set_mo_occ to hf.get_occ
1489
+ - unify variable names, mo -> mo_coeff, log -> verbose
1490
+ - Include nuclear repulsion in mcscf.e_tot
1491
+ - Add tests for most module level functions
1492
+ - Define update_casdm for CASSCF
1493
+ * Add tests, cover ~ 90% of code
1494
+ * Support molecular geometry string as input for Mole.atom
1495
+ * Improve density fitting model for non-relativistic SCF
1496
+ * Add documentation for whole package
1497
+ * API updates:
1498
+ - Remove the first argument (Mole object) in CASSCF/CASCI class initialization
1499
+ - Change the return value ordering of function scf.hf.kernel
1500
+ - Set default value for the arguments of most class functions
1501
+ * Removing the default calling of analyze() in kernel functions
1502
+ * Fix screening bug in ao2mo.outcore for long-range separated molecule
1503
+ * Add 4pdm
1504
+
1505
+ Version 0.9 (2015-1-4):
1506
+ * Add 2-step FCIQMC-CASSCF, using NECI as FCI solver
1507
+ * Solve Python 3.x compatibility
1508
+ * general AO2MO integral transformation
1509
+ * Add density fitting HF, DF-MP2
1510
+
1511
+ Version 0.8 (2014-12-21):
1512
+ * Support OS X
1513
+ * MCSCF for triplet
1514
+ * Add symmetry support for MCSCF
1515
+ * Add UHF-MCSCF
1516
+ * Add 2-step DMRGSCF, using Block and CheMPS2 as FCI solver
1517
+ * Add ROHF
1518
+
1519
+ Version 0.7 (2014-11-12):
1520
+ * Fix memory leaks
1521
+ * Runtime keywords checking
1522
+ * Add MP2 density matrix
1523
+ * Add FCI based on uhf integrals
1524
+ * Add CCSD
1525
+
1526
+ Version 0.6 (2014-10-17):
1527
+ * Fix bug in dhf
1528
+ * add future/lo for localized orbital
1529
+
1530
+ Version 0.5 (2014-10-01):
1531
+ * Change basis format
1532
+ * Remove Cython dependence
1533
+ * Upgrade dft to use libxc-2.0.0
1534
+ * Add DFT, FCI, CASSCF, HF-gradients (NR and R), HF-NMR (NR and R)
1535
+
1536
+ Version 0.4 (2014-08-17):
1537
+ * Module "future" for upcoming functions
1538
+ * One-line command to run QC calculation with pyscf
1539
+ * Fix bug of AO to MO transformation in OpenMP environment
1540
+
1541
+ Version 0.3 (2014-07-03):
1542
+ * Change import layout
1543
+
1544
+ Version 0.2 (2014-05-08):
1545
+ * Integral transformation
1546
+
1547
+ Version 0.1 (2014-05-03):
1548
+ * Setup pyscf
1549
+