pyreduce-astro 0.7a3__tar.gz → 0.7a4__tar.gz

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/CHANGELOG.md

@@ -1,6 +1,12 @@
 # Changelog
 
 
+## [0.7a4] - 2025-12-23
+
+### Added
+- `reduce examples --run` flag to download and execute examples directly
+- PEP 723 inline metadata in examples for `uv run` compatibility
+
 ## [0.7a3] - 2025-12-23
 
 ### Added

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyreduce-astro
-Version: 0.7a3
+Version: 0.7a4
 Summary: A data reduction package for echelle spectrographs
 Project-URL: Homepage, https://github.com/ivh/PyReduce
 Project-URL: Documentation, https://pyreduce-astro.readthedocs.io

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/aj_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 AJ instrument example: Fiber bundle tracing with direct function calls.
 

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/crires_plus_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a CRIRES+ dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/custom_instrument_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a sample UVES dataset, and runs the full extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/harpn_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a HARPS-N dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/harps_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a sample HARPS dataset, and runs the full extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/harps_gridsearch.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 import os.path
 
 import matplotlib.pyplot as plt

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/just_one_swath.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 import matplotlib.pyplot as plt
 import numpy as np
 from astropy.io import fits

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/jwst_miri_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a JWST MIRI dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/jwst_niriss_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a sample JWST NIRISS dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/lick_apf_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a Lick APF dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/mcdonald_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a McDonald Observatory dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/metis_ifu_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a simulated METIS dataset, and runs the full extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/metis_lss_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a simulated METIS dataset, and runs the full extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/micado_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a ScopeSim simulated MICADO dataset (with updated spectral layout and updated line lists), and runs the full extraction.

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/neid_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a NEID dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/nirspec_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a sample NIRSPEC dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/toes_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 import numpy as np
 
 from pyreduce.configuration import get_configuration_for_instrument

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/uves_callfunc.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Example showing direct function calls for each step.
 

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/uves_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a sample UVES dataset, and runs the full extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/examples/xshooter_example.py

@@ -1,3 +1,7 @@
+# /// script
+# requires-python = ">=3.13"
+# dependencies = ["pyreduce-astro>=0.7"]
+# ///
 """
 Simple usage example for PyReduce
 Loads a sample XSHOOTER dataset, and runs the extraction

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "pyreduce-astro"
-version = "0.7a3"
+version = "0.7a4"
 requires-python = ">=3.11"
 description = "A data reduction package for echelle spectrographs"
 readme = "README.md"

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/pyreduce/__main__.py

@@ -161,20 +161,25 @@ def download(instrument):
     "--list", "-l", "list_examples", is_flag=True, help="List available examples"
 )
 @click.option("--all", "-a", "download_all", is_flag=True, help="Download all examples")
+@click.option("--run", "-r", is_flag=True, help="Run the example after downloading")
 @click.option("--output", "-o", default=".", help="Output directory")
-def examples(filename, list_examples, download_all, output):
-    """List or download example scripts from GitHub.
+def examples(filename, list_examples, download_all, run, output):
+    """List, download, or run example scripts from GitHub.
 
     Downloads examples matching your installed PyReduce version.
 
     \b
     Examples:
-        reduce examples              # List available examples
-        reduce examples uves_example.py    # Download to current dir
-        reduce examples --all -o ~/scripts # Download all to ~/scripts
+        reduce examples                     # List available examples
+        reduce examples uves_example.py     # Download to current dir
+        reduce examples -r uves_example.py  # Download and run
+        reduce examples --all -o ~/scripts  # Download all to ~/scripts
     """
     import json
     import os
+    import subprocess
+    import sys
+    import tempfile
     import urllib.request
     from urllib.error import HTTPError
 
@@ -212,6 +217,32 @@ def examples(filename, list_examples, download_all, output):
             click.echo(f"  {name}")
         return
 
+    if run and download_all:
+        raise click.ClickException("Cannot use --run with --all")
+
+    # Run mode: download to temp and execute
+    if run:
+        if filename not in example_files:
+            raise click.ClickException(
+                f"Unknown example '{filename}'. Use 'reduce examples --list' to see available."
+            )
+        url = f"{github_raw}/{filename}"
+        with tempfile.NamedTemporaryFile(mode="w", suffix=".py", delete=False) as f:
+            try:
+                with urllib.request.urlopen(url) as resp:
+                    f.write(resp.read().decode())
+                temp_path = f.name
+            except HTTPError as e:
+                raise click.ClickException(
+                    f"Failed to download {filename}: {e}"
+                ) from None
+        try:
+            click.echo(f"Running {filename}...")
+            result = subprocess.run([sys.executable, temp_path], check=False)
+            sys.exit(result.returncode)
+        finally:
+            os.unlink(temp_path)
+
     # Ensure output directory exists
     os.makedirs(output, exist_ok=True)
 

{pyreduce_astro-0.7a3 → pyreduce_astro-0.7a4}/uv.lock

@@ -1456,7 +1456,7 @@ wheels = [
 
 [[package]]
 name = "pyreduce-astro"
-version = "0.7a3"
+version = "0.7a4"
 source = { editable = "." }
 dependencies = [
     { name = "astropy" },