pynamicalsys 1.0.1__tar.gz

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Files changed (34) hide show
  1. pynamicalsys-1.0.1/.gitignore +20 -0
  2. pynamicalsys-1.0.1/CHANGELOG.md +31 -0
  3. pynamicalsys-1.0.1/CITATION.cff +10 -0
  4. pynamicalsys-1.0.1/CONTRIBUTING.md +47 -0
  5. pynamicalsys-1.0.1/LICENSE +674 -0
  6. pynamicalsys-1.0.1/MANIFEST.in +11 -0
  7. pynamicalsys-1.0.1/PKG-INFO +779 -0
  8. pynamicalsys-1.0.1/README.md +87 -0
  9. pynamicalsys-1.0.1/pyproject.toml +31 -0
  10. pynamicalsys-1.0.1/setup.cfg +4 -0
  11. pynamicalsys-1.0.1/src/pynamicalsys/__init__.py +24 -0
  12. pynamicalsys-1.0.1/src/pynamicalsys/__version__.py +21 -0
  13. pynamicalsys-1.0.1/src/pynamicalsys/common/__init__.py +16 -0
  14. pynamicalsys-1.0.1/src/pynamicalsys/common/basin_analysis.py +170 -0
  15. pynamicalsys-1.0.1/src/pynamicalsys/common/recurrence_quantification_analysis.py +426 -0
  16. pynamicalsys-1.0.1/src/pynamicalsys/common/utils.py +344 -0
  17. pynamicalsys-1.0.1/src/pynamicalsys/continuous_time/__init__.py +16 -0
  18. pynamicalsys-1.0.1/src/pynamicalsys/core/__init__.py +16 -0
  19. pynamicalsys-1.0.1/src/pynamicalsys/core/basin_metrics.py +206 -0
  20. pynamicalsys-1.0.1/src/pynamicalsys/core/continuous_dynamical_systems.py +18 -0
  21. pynamicalsys-1.0.1/src/pynamicalsys/core/discrete_dynamical_systems.py +3391 -0
  22. pynamicalsys-1.0.1/src/pynamicalsys/core/plot_styler.py +155 -0
  23. pynamicalsys-1.0.1/src/pynamicalsys/core/time_series_metrics.py +139 -0
  24. pynamicalsys-1.0.1/src/pynamicalsys/discrete_time/__init__.py +16 -0
  25. pynamicalsys-1.0.1/src/pynamicalsys/discrete_time/dynamical_indicators.py +1226 -0
  26. pynamicalsys-1.0.1/src/pynamicalsys/discrete_time/models.py +435 -0
  27. pynamicalsys-1.0.1/src/pynamicalsys/discrete_time/trajectory_analysis.py +1459 -0
  28. pynamicalsys-1.0.1/src/pynamicalsys/discrete_time/transport.py +501 -0
  29. pynamicalsys-1.0.1/src/pynamicalsys/discrete_time/validators.py +313 -0
  30. pynamicalsys-1.0.1/src/pynamicalsys.egg-info/PKG-INFO +779 -0
  31. pynamicalsys-1.0.1/src/pynamicalsys.egg-info/SOURCES.txt +32 -0
  32. pynamicalsys-1.0.1/src/pynamicalsys.egg-info/dependency_links.txt +1 -0
  33. pynamicalsys-1.0.1/src/pynamicalsys.egg-info/requires.txt +3 -0
  34. pynamicalsys-1.0.1/src/pynamicalsys.egg-info/top_level.txt +1 -0
pynamicalsys-1.0.1/.gitignore ADDED
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+ __pycache__
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+ .vscode/
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+ .DS_Store
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+ *.egg-info/
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+ tests/*.png
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+ dist/
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+ src/pynamicalsys/__version__.py
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+ docs/build/
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+ build/
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+ paper/*.eps
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+ paper/*.png
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+ paper/*.svg
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+ paper/*.dat
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+ paper/*.py
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+
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+ anaconda-project.yml
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+ make.bat
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+ Makefile
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+ *.egg
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+ *.pyc
pynamicalsys-1.0.1/CHANGELOG.md ADDED
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+ # Changelog
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+
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+ All notable changes to this project will be documented in this file.
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+
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+ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
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+ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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+
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+ ## [v1.0.0] - 2025-06-16
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+
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+ ### Added
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+
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+ - `DiscreteDynamicalSystems` class for simulating and analyzing discrete nonlinear dynamical systems:
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+ - Trajectory computation.
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+ - Chaotic indicators.
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+ - Fixed points, periodic orbits, and manifolds.
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+ - Statistical analysis of ensemble of trajetories.
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+ - Escape basin quantification.
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+ - Initial release of the package
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+ - First version of documentation
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+ - Basic tests
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+
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+ - `BasinMetrics` class to compute basin metris such as basin entropy and boundary dimension.
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+
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+ - `TimeSeriesMetrics` class to compute metrics related to time series analysis.
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+
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+ - `PlotStyler` utility class to globally configure and apply consistent styling for Matplotlib plots.
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+
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+ ---
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+
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+ <!-- Dummy heading to avoid ending on a transition -->
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+ ##
pynamicalsys-1.0.1/CITATION.cff ADDED
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+ cff-version: 1.2.0
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+ message: "If you use this software, please cite it as below."
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+ authors:
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+ - family-names: Rolim Sales
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+ given-names: Matheus
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+ orcid: https://orcid.org/0000-0002-1121-6371
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+ title: "pynamicalsys"
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+ version: 1.0.0
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+ date-released: 2025-06-16
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+ repository-code: "https://github.com/mrolims/pynamicalsys.git"
pynamicalsys-1.0.1/CONTRIBUTING.md ADDED
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+ # Contributing to PyCandy
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+
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+ We appreciate your interest in contributing to **PyCandy**! Whether you're fixing a bug, suggesting an improvement, or adding a new feature, your help is welcome.
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+
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+ ## How to Contribute
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+
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+ 1. **Fork the Repository**
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+ Create a personal copy of this repository.
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+
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+ 2. **Create a Feature Branch**
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+ Use a descriptive branch name:
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+
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+ ```bash
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+ $ git checkout -b fix-typo-in-readme
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+ ```
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+
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+ 3. **Make Changes**
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+
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+ Follow the coding style and ensure existing functionality it not broken. Add tests if relevant.
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+
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+ 4. **Submit a Pull Request**
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+
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+ Push your branch and open a pull request on GitHub. Include a clear description of your changes.
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+
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+ 5. **Wait for Review**
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+
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+ We'll review your PR and may request changes or offer suggestions.
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+
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+ ## Coding Style
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+
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+ - Follow **PEP8** standards for Pycode code.
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+ - Use **docstrings** (PEP257) for public classes, functions, and modules.
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+ - Include **type hints** where appropriate.
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+ - Keep commits clean and descriptive.
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+
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+ ## Bug Reports & Feature Requests
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+
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+ - Submit an [issue](https://github.com/mrolims/pynamicalsys/issues) to report bugs or suggest new features.
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+ - Include steps to reproduce, error messages, or use cases when possible.
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+
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+ ## Code of Conduct
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+
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+ We strive to maintain a respectful and inclusive community. Please follow our [code of conduct](https://pynamicalsys.readthedocs.io/en/latest/) when interacting.
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+
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+ ## Thank You
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+
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+ Your contributions help improve the project and support the community — thank you!