pymodaq 5.0.0__tar.gz → 5.0.2__tar.gz

{pymodaq-5.0.0 → pymodaq-5.0.2}/.gitignore

@@ -127,3 +127,4 @@ venv.bak/
 *yacctab.py
 *lextab.py
 
+.mu_repo

pymodaq-5.0.2/PKG-INFO

@@ -0,0 +1,242 @@
+Metadata-Version: 2.4
+Name: pymodaq
+Version: 5.0.2
+Summary: Modular Data Acquisition with Python
+Project-URL: Homepage, http://pymodaq.cnrs.fr
+Project-URL: Source, https://github.com/PyMoDAQ/PyMoDAQ
+Project-URL: Tracker, https://github.com/PyMoDAQ/PyMoDAQ/issues
+Author-email: Sébastien Weber <sebastien.weber@cemes.fr>
+License: The MIT License (MIT)
+        
+        Copyright (c) 2021 Sebastien Weber <sebastien.weber@cemes.fr>
+        
+        Permission is hereby granted, free of charge, to any person obtaining a copy
+        of this software and associated documentation files (the "Software"), to deal
+        in the Software without restriction, including without limitation the rights
+        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+        copies of the Software, and to permit persons to whom the Software is
+        furnished to do so, subject to the following conditions:
+        
+        The above copyright notice and this permission notice shall be included in
+        all copies or substantial portions of the Software.
+        
+        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+        THE SOFTWARE.
+License-File: LICENSE
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Environment :: Other Environment
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: MIT License
+Classifier: Natural Language :: English
+Classifier: Operating System :: OS Independent
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Topic :: Scientific/Engineering :: Human Machine Interfaces
+Classifier: Topic :: Scientific/Engineering :: Visualization
+Classifier: Topic :: Software Development :: Libraries :: Python Modules
+Classifier: Topic :: Software Development :: User Interfaces
+Requires-Python: >=3.8
+Requires-Dist: bayesian-optimization<2.0.0
+Requires-Dist: easydict
+Requires-Dist: multipledispatch
+Requires-Dist: numpy<2.0.0
+Requires-Dist: packaging
+Requires-Dist: pint
+Requires-Dist: pyleco>0.3; python_version >= '3.8'
+Requires-Dist: pymodaq-data>=5.0.18
+Requires-Dist: pymodaq-gui>=5.0.17
+Requires-Dist: pymodaq-plugin-manager>=0.0.17
+Requires-Dist: pymodaq-plugins-mock>=5.0.5
+Requires-Dist: pymodaq-utils>=0.0.14
+Requires-Dist: pyqtgraph>=0.12
+Requires-Dist: python-dateutil
+Requires-Dist: qtconsole
+Requires-Dist: qtpy
+Requires-Dist: scipy
+Requires-Dist: setuptools>=60
+Requires-Dist: simple-pid
+Requires-Dist: toml
+Provides-Extra: dev
+Requires-Dist: flake8; extra == 'dev'
+Requires-Dist: h5py; extra == 'dev'
+Requires-Dist: hatch; extra == 'dev'
+Requires-Dist: pyqt5; extra == 'dev'
+Requires-Dist: pyqt6; extra == 'dev'
+Requires-Dist: pyside6; extra == 'dev'
+Requires-Dist: pytest; extra == 'dev'
+Requires-Dist: pytest-cov; extra == 'dev'
+Requires-Dist: pytest-qt; extra == 'dev'
+Requires-Dist: pytest-xdist; extra == 'dev'
+Requires-Dist: pytest-xvfb; extra == 'dev'
+Description-Content-Type: text/x-rst
+
+PyMoDAQ
+#######
+
+.. image:: https://img.shields.io/pypi/v/pymodaq.svg
+   :target: https://pypi.org/project/pymodaq/
+   :alt: Latest Version
+
+.. image:: https://readthedocs.org/projects/pymodaq/badge/?version=latest
+   :target: https://pymodaq.readthedocs.io/en/stable/?badge=latest
+   :alt: Documentation Status
+
+.. image:: https://codecov.io/gh/PyMoDAQ/PyMoDAQ/graph/badge.svg?token=IQNJRCQDM2
+ :target: https://codecov.io/gh/PyMoDAQ/PyMoDAQ
+
+
+
++-------------+-------------------+------------------+---------------------+
+|  Linux      | PyQt5             | PyQt6            | PySide6             |
++=============+===================+==================+=====================+
+| Python 3.9  | |39-linux-pyqt5|  | |39-linux-pyqt6| | |39-linux-pyside6|  |
++-------------+-------------------+------------------+---------------------+
+| Python 3.10 | |310-linux-pyqt5| ||310-linux-pyqt6| | |310-linux-pyside6| |
++-------------+-------------------+------------------+---------------------+
+| Python 3.11 | |311-linux-pyqt5| ||311-linux-pyqt6| | |311-linux-pyside6| |
++-------------+-------------------+------------------+---------------------+
+| Python 3.12 | |312-linux-pyqt5| ||312-linux-pyqt6| | |312-linux-pyside6| |
++-------------+-------------------+------------------+---------------------+
+
+
+.. |39-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.9_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.9_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.9_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.10_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.10_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.10_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.11_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.11_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.11_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.12_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.12_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.12_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+
++-------------+---------------------+--------------------+-----------------------+
+|  Windows    | PyQt5               | PyQt6              | PySide6               |
++=============+=====================+====================+=======================+
+| Python 3.9  | |39-windows-pyqt5|  | |39-windows-pyqt6| | |39-windows-pyside6|  |
++-------------+---------------------+--------------------+-----------------------+
+| Python 3.10 | |310-windows-pyqt5| ||310-windows-pyqt6| | |310-windows-pyside6| |
++-------------+---------------------+--------------------+-----------------------+
+| Python 3.11 | |311-windows-pyqt5| ||311-windows-pyqt6| | |311-windows-pyside6| |
++-------------+---------------------+--------------------+-----------------------+
+| Python 3.12 | |312-windows-pyqt5| ||312-windows-pyqt6| | |312-windows-pyside6| |
++-------------+---------------------+--------------------+-----------------------+
+
+.. |39-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.9_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.9_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.9_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.10_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.10_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.10_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.11_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.11_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.11_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.12_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.12_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.12_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+
+
+
+.. figure:: http://pymodaq.cnrs.fr/en/latest/_static/splash.png
+   :alt: shortcut
+
+
+PyMoDAQ, Modular Data Acquisition with Python, is a set of **python** modules used to interface any kind of experiments.
+It simplifies the interaction with detector and actuator hardware to go straight to the data acquisition of interest.
+
+It has two purposes:
+
+* First, to provide a complete interface to perform automated measurements or logging data without having to write a user/interface for each
+  new experiment, this is under the *Dashboard_module* environment and its extensions.
+* Second, to provide various tools (modules) to easily build *custom apps*
+
+It is organised a shown below:
+
+.. figure:: http://pymodaq.cnrs.fr/en/latest/_images/pymodaq_diagram.png
+   :alt: overview
+
+   PyMoDAQ's Dashboard and its extensions: DAQ_Scan for automated acquisitions, DAQ_Logger for data logging and many other.
+
+The main component is the **Dashboard** : This is a graphical component that will initialize actuators and detectors given
+the need of your particular experiment. You configure the dashboard using an interface for quick launch of various
+configurations (numbers and types of control modules).
+
+The detectors and the actuators are represented and manipulated using two control modules:
+
+* **DAQ_Move_module** : used to control/drive an actuator (stand alone and/or automated).
+  Any number of these modules can be instantiated in the Dashboard
+* **DAQ_Viewer_module** : used to control/drive a detector (stand alone and/or automated).
+
+Any number of these modules can be instantiated in the Dashboard.
+
+The Dashboard allows you to start dedicated extensions that will make use of the control modules:
+
+* **DAQ_Logger_module** : This module lets you log data from one or many detectors defined in the dashboard. You can log data
+  in a binary hierarchical hdf5 file or towards a sql database
+* **DAQ_Scan_module** : This module lets you configure automated data acquisition from one or many detectors defined
+  in the dashboard as a function or one or more actuators defined also in the dashboard.
+
+and many others to simplify any application development.
+
+Published under the MIT FREE SOFTWARE LICENSE
+
+GitHub repo: https://github.com/PyMoDAQ
+
+Documentation: http://pymodaq.cnrs.fr/

pymodaq-5.0.2/README.rst

@@ -0,0 +1,163 @@
+PyMoDAQ
+#######
+
+.. image:: https://img.shields.io/pypi/v/pymodaq.svg
+   :target: https://pypi.org/project/pymodaq/
+   :alt: Latest Version
+
+.. image:: https://readthedocs.org/projects/pymodaq/badge/?version=latest
+   :target: https://pymodaq.readthedocs.io/en/stable/?badge=latest
+   :alt: Documentation Status
+
+.. image:: https://codecov.io/gh/PyMoDAQ/PyMoDAQ/graph/badge.svg?token=IQNJRCQDM2
+ :target: https://codecov.io/gh/PyMoDAQ/PyMoDAQ
+
+
+
++-------------+-------------------+------------------+---------------------+
+|  Linux      | PyQt5             | PyQt6            | PySide6             |
++=============+===================+==================+=====================+
+| Python 3.9  | |39-linux-pyqt5|  | |39-linux-pyqt6| | |39-linux-pyside6|  |
++-------------+-------------------+------------------+---------------------+
+| Python 3.10 | |310-linux-pyqt5| ||310-linux-pyqt6| | |310-linux-pyside6| |
++-------------+-------------------+------------------+---------------------+
+| Python 3.11 | |311-linux-pyqt5| ||311-linux-pyqt6| | |311-linux-pyside6| |
++-------------+-------------------+------------------+---------------------+
+| Python 3.12 | |312-linux-pyqt5| ||312-linux-pyqt6| | |312-linux-pyside6| |
++-------------+-------------------+------------------+---------------------+
+
+
+.. |39-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.9_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.9_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.9_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.10_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.10_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.10_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.11_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.11_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.11_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-linux-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.12_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-linux-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.12_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-linux-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Linux_3.12_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+
++-------------+---------------------+--------------------+-----------------------+
+|  Windows    | PyQt5               | PyQt6              | PySide6               |
++=============+=====================+====================+=======================+
+| Python 3.9  | |39-windows-pyqt5|  | |39-windows-pyqt6| | |39-windows-pyside6|  |
++-------------+---------------------+--------------------+-----------------------+
+| Python 3.10 | |310-windows-pyqt5| ||310-windows-pyqt6| | |310-windows-pyside6| |
++-------------+---------------------+--------------------+-----------------------+
+| Python 3.11 | |311-windows-pyqt5| ||311-windows-pyqt6| | |311-windows-pyside6| |
++-------------+---------------------+--------------------+-----------------------+
+| Python 3.12 | |312-windows-pyqt5| ||312-windows-pyqt6| | |312-windows-pyside6| |
++-------------+---------------------+--------------------+-----------------------+
+
+.. |39-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.9_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.9_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |39-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.9_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.10_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.10_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |310-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.10_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.11_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.11_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |311-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.11_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-windows-pyqt5| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.12_pyqt5.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-windows-pyqt6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.12_pyqt6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+.. |312-windows-pyside6| image:: https://raw.githubusercontent.com/PyMoDAQ/PyMoDAQ/badges/5.0.x_dev/tests_Windows_3.12_pyside6.svg
+    :target: https://github.com/PyMoDAQ/PyMoDAQ/actions/workflows/tests.yml
+
+
+
+
+.. figure:: http://pymodaq.cnrs.fr/en/latest/_static/splash.png
+   :alt: shortcut
+
+
+PyMoDAQ, Modular Data Acquisition with Python, is a set of **python** modules used to interface any kind of experiments.
+It simplifies the interaction with detector and actuator hardware to go straight to the data acquisition of interest.
+
+It has two purposes:
+
+* First, to provide a complete interface to perform automated measurements or logging data without having to write a user/interface for each
+  new experiment, this is under the *Dashboard_module* environment and its extensions.
+* Second, to provide various tools (modules) to easily build *custom apps*
+
+It is organised a shown below:
+
+.. figure:: http://pymodaq.cnrs.fr/en/latest/_images/pymodaq_diagram.png
+   :alt: overview
+
+   PyMoDAQ's Dashboard and its extensions: DAQ_Scan for automated acquisitions, DAQ_Logger for data logging and many other.
+
+The main component is the **Dashboard** : This is a graphical component that will initialize actuators and detectors given
+the need of your particular experiment. You configure the dashboard using an interface for quick launch of various
+configurations (numbers and types of control modules).
+
+The detectors and the actuators are represented and manipulated using two control modules:
+
+* **DAQ_Move_module** : used to control/drive an actuator (stand alone and/or automated).
+  Any number of these modules can be instantiated in the Dashboard
+* **DAQ_Viewer_module** : used to control/drive a detector (stand alone and/or automated).
+
+Any number of these modules can be instantiated in the Dashboard.
+
+The Dashboard allows you to start dedicated extensions that will make use of the control modules:
+
+* **DAQ_Logger_module** : This module lets you log data from one or many detectors defined in the dashboard. You can log data
+  in a binary hierarchical hdf5 file or towards a sql database
+* **DAQ_Scan_module** : This module lets you configure automated data acquisition from one or many detectors defined
+  in the dashboard as a function or one or more actuators defined also in the dashboard.
+
+and many others to simplify any application development.
+
+Published under the MIT FREE SOFTWARE LICENSE
+
+GitHub repo: https://github.com/PyMoDAQ
+
+Documentation: http://pymodaq.cnrs.fr/

{pymodaq-5.0.0 → pymodaq-5.0.2}/pyproject.toml

@@ -1,5 +1,5 @@
 [build-system]
-requires = ["hatchling>=1.9.0", "hatch-vcs"]
+requires = ["hatchling>=1.9.0", "hatch-vcs", "toml"]
 build-backend = "hatchling.build"
 
 [project]
@@ -21,42 +21,58 @@ classifiers = [
     "License :: OSI Approved :: MIT License",
     "Natural Language :: English",
     "Operating System :: OS Independent",
-    "Programming Language :: Python :: 3.8",
     "Programming Language :: Python :: 3.9",
     "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
     "Topic :: Scientific/Engineering :: Human Machine Interfaces",
     "Topic :: Scientific/Engineering :: Visualization",
     "Topic :: Software Development :: Libraries :: Python Modules",
     "Topic :: Software Development :: User Interfaces",
 ]
 dependencies = [
-    "pymodaq_utils",
-    "pymodaq_gui",
-    "pymodaq_data",
+    "pymodaq_utils>=0.0.14",
+    "pymodaq_gui>=5.0.17",
+    "pymodaq_data>=5.0.18",
     "easydict",
-    "importlib_metadata; python_version<\"3.8\"",
     "multipledispatch",
     "numpy < 2.0.0",
     "packaging",
     "pint",
     "pymodaq_plugin_manager>=0.0.17",
-    "pymodaq_plugins_mock",
+    "pymodaq_plugins_mock>=5.0.5",
     "pyqtgraph>=0.12",
     "python-dateutil",
-    "qdarkstyle",
     "qtpy",
     "scipy",
     "setuptools>=60",
     "simple_pid",
     "toml",
     "qtconsole",
-    "tables<3.9",  # issue with some version of required package blosc2>=2.2.8
-    "pyleco; python_version>=\"3.8\"",
-    "bayesian-optimization"
+    "pyleco>0.3; python_version>=\"3.8\"",
+    "bayesian-optimization<2.0.0",
 ]
 
+
+[project.optional-dependencies]
+dev = [
+    "hatch", 
+    "flake8",
+    "h5py",
+    "pytest",
+    "pytest-cov",
+    "pytest-xdist",
+
+    "pyqt5",
+    "pyqt6",
+    "pyside6",
+    "pytest-qt",
+    "pytest-xvfb",
+]
+
+
 [project.scripts]
+pymodaq_updater = "pymodaq.updater:main"
 daq_logger = "pymodaq.extensions.daq_logger:main"
 daq_move = "pymodaq.control_modules.daq_move:main"
 daq_scan = "pymodaq.extensions.daq_scan:main"
@@ -72,8 +88,15 @@ Tracker = "https://github.com/PyMoDAQ/PyMoDAQ/issues"
 
 [tool.hatch.version]
 source = "vcs"
+fallback-version = '5.0.1'
 
 [tool.hatch.build.targets.sdist]
 include = [
     "/src",
 ]
+
+[tool.coverage.run]
+omit = [
+    "*/examples/*",
+    "*/resources/*"
+]

pymodaq-5.0.2/src/pymodaq/__init__.py

@@ -0,0 +1,86 @@
+import importlib.util
+import os
+import sys
+from pint import UnitRegistry
+from pathlib import Path
+
+import warnings
+
+import pymodaq_utils  # to init stuff related to pymodaq_utils  # necessary, leave it there
+import pymodaq_data  # to init stuff related to pymodaq_data  # necessary, leave it there
+import pymodaq_gui  # to init stuff related to pymodaq_gui  # necessary, leave it there
+
+from pymodaq_data import Q_, Unit, ureg  # necessary, leave it there
+
+
+try:
+    # with open(str(Path(__file__).parent.joinpath('resources/VERSION')), 'r') as fvers:
+    #     __version__ = fvers.read().strip()
+
+    from pymodaq_utils.logger import set_logger
+    from pymodaq_utils.utils import get_version
+    __version__ = get_version('pymodaq')
+    try:
+        logger = set_logger('pymodaq', add_handler=True, base_logger=True)
+
+        from pymodaq.utils.daq_utils import copy_preset, get_instrument_plugins
+
+        from pymodaq_utils.config import Config
+        from pymodaq.utils.scanner.utils import register_scanners
+        from pymodaq_data.plotting.plotter.plotter import register_plotter, PlotterFactory
+
+        # issue on windows when using .NET code within multithreads, this below allows it but requires
+        # the pywin32 (pythoncom) package
+        if importlib.util.find_spec('clr') is not None:
+            try:
+                import pythoncom
+                pythoncom.CoInitialize()
+            except ModuleNotFoundError as e:
+                infos = "You have installed plugins requiring the pywin32 package to work correctly," \
+                        " please type in *pip install pywin32* and restart PyMoDAQ"
+                print(infos)
+                logger.warning(infos)
+
+        config = Config()  # to ckeck for config file existence, otherwise create one
+        copy_preset()
+
+        from pymodaq_utils.config import Config
+        from pymodaq.utils.scanner.utils import register_scanners
+
+        try:
+            # Need the config to exists before importing
+            from pymodaq_utils.environment import EnvironmentBackupManager
+
+            if config['backup']['keep_backup']:
+                ebm = EnvironmentBackupManager()
+                ebm.save_backup()
+        except ModuleNotFoundError as e:
+            infos = "Your pymodaq_utils version is outdated and doesn't allow for automatic backup of pip packages." \
+                    " You should update it."
+            print(infos)
+            logger.warning(infos)
+
+        logger.info('*************************************************************************')
+        logger.info(f"Getting the list of instrument plugins...")
+        logger.info('')
+        get_instrument_plugins()
+        logger.info('*************************************************************************')
+
+        logger.info('')
+        logger.info('')
+        logger.info('************************')
+        logger.info(f"Registering Scanners...")
+        register_scanners()
+        logger.info(f"Done")
+        logger.info('************************')
+
+    except Exception:
+        print("Couldn't create the local folder to store logs , presets...")
+
+
+
+except Exception as e:
+    try:
+        logger.exception(str(e))
+    except Exception as e:
+        print(str(e))