pylode 3.2.2__tar.gz → 3.3.3__tar.gz

{pylode-3.2.2 → pylode-3.3.3}/PKG-INFO

@@ -1,21 +1,27 @@
-Metadata-Version: 2.3
+Metadata-Version: 2.4
 Name: pylode
-Version: 3.2.2
+Version: 3.3.3
 Summary: An OWL ontology documentation tool using Python, based on LODE.
 Author: Nicholas Car
-Author-email: nick@kurrawong.net
-Requires-Python: >=3.9,<4.0
+Author-email: Nicholas Car <nick@kurrawong.ai>
+License-Expression: BSD-3-Clause
 Classifier: Programming Language :: Python :: 3
 Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
-Requires-Dist: Markdown (>=3.3.7,<4.0.0)
-Requires-Dist: dominate (>=2.6.0,<3.0.0)
-Requires-Dist: html5lib (>=1.1,<2.0)
-Requires-Dist: httpx (>=0.25.0,<1.0.0)
-Requires-Dist: rdflib (>=7.0.0,<8.0.0)
+Classifier: Programming Language :: Python :: 3.14
+Requires-Dist: rdflib>=7.5.0,<8.0.0
+Requires-Dist: markdown>=3.3.7,<4
+Requires-Dist: dominate>=2.6.0,<3
+Requires-Dist: html5lib>=1.1,<2
+Requires-Dist: httpx>=0.25.0,<1.0.0
+Requires-Python: >=3.9, <4
+Project-URL: Homepage, https://github.com/RDFLib/pyLODE
+Project-URL: Documentation, https://github.com/RDFLib/pyLODE
+Project-URL: Source, https://github.com/RDFLib/pyLODE
+Project-URL: Changelog, https://github.com/RDFLib/pyLODE/releases
 Description-Content-Type: text/markdown
 
 ![pyLODE logo](https://rawcdn.githack.com/RDFLib/pyLODE/master/img/pyLODE-250.png)
@@ -43,7 +49,7 @@ To access v 2.13.2 of pyLODE, either:
 
 - [Download it from PyPI](https://pypi.org/project/pylode/2.13.2/)
 - [Check it out from GitHub](https://github.com/RDFLib/pyLODE/releases/tag/2.13.2)
-- Access it via the [online service](http://pylode.surroundaustralia.com/)
+- Access it via the [online service](http://tools.kurrawong.ai/pylode)
 
 ---
 
@@ -85,7 +91,7 @@ The tool can be used in multiple ways:
   - via the [Falcon framework](https://falconframework.org/)
   - see `server.py`
 - As-a-service online  
-  - https://pylode.surroundaustralia.com
+  - https://tools.kurrawong.ai/pylode
 
 ### Command line arguments
 
@@ -174,12 +180,13 @@ pyLODE supports simple and complex Agent objects, including ORCIDs, affiliations
 
 ```turtle
 <ontology_x>
-    dct:creator [
-        sdo:name "Nicholas J. Car" ;
-        sdo:identifier <http://orcid.org/0000-0002-8742-7730> ;
-        sdo:affiliation [
-            sdo:name "SURROUND Australia Pty Ldt." ;
-            sdo:url "https://surroundaustralia.com"^^xsd:anyURI ;
+    schema:creator [
+        schema:name "Nicholas J. Car" ;
+        schema:identifier <http://orcid.org/0000-0002-8742-7730> ;
+        schema:email "nick@kurrawong.ai"^^xsd:anyURI ;
+        schema:affiliation [
+            schema:name "KurrawongAI" ;
+            schema:url "https://kurrawong.ai"^^xsd:anyURI ;
         ] ;
     ] ;
 .
@@ -222,12 +229,13 @@ python -m pytest tests --disable-warnings
 
 ## Releases
 
-**Current release:** **3.2.1**
+**Current release:** **3.2.3**
 
 ### Release Schedule
 
 | Version | Date             | Description                                                                     |
 |---------|------------------|---------------------------------------------------------------------------------|
+| 3.2.3   | 27 January 2026  | Updating dependencies & release procedure. Tidy testing cleanup                 |
 | 3.2.1   | 31 January 2025  | Fix version number in version.py                                                |
 | 3.2.0   | 27 July 2024     | dependency updates and merged multiple small PRs                                |
 | 3.1.4   | 6 April 2024     | Fix load_ontology function's detection of data input                            |
@@ -294,7 +302,7 @@ Nicholas Car
     * `poetry build`
     * `poetry publish -u __token__ -p {TOKEN}`
 9. make a GitHub release
-    * include `/bin` build artifacts
-9. increment version number to next release in `pyproject.toml`
-10. commit all changes `$ git commit -a "..."`
-11. push changes `$ git push`
+    * include `/dist` build artefacts
+10. increment version number to next release in `pyproject.toml`
+11. commit all changes `$ git commit -a "..."`
+12. push changes `$ git push`

{pylode-3.2.2 → pylode-3.3.3}/README.md

@@ -23,7 +23,7 @@ To access v 2.13.2 of pyLODE, either:
 
 - [Download it from PyPI](https://pypi.org/project/pylode/2.13.2/)
 - [Check it out from GitHub](https://github.com/RDFLib/pyLODE/releases/tag/2.13.2)
-- Access it via the [online service](http://pylode.surroundaustralia.com/)
+- Access it via the [online service](http://tools.kurrawong.ai/pylode)
 
 ---
 
@@ -65,7 +65,7 @@ The tool can be used in multiple ways:
   - via the [Falcon framework](https://falconframework.org/)
   - see `server.py`
 - As-a-service online  
-  - https://pylode.surroundaustralia.com
+  - https://tools.kurrawong.ai/pylode
 
 ### Command line arguments
 
@@ -154,12 +154,13 @@ pyLODE supports simple and complex Agent objects, including ORCIDs, affiliations
 
 ```turtle
 <ontology_x>
-    dct:creator [
-        sdo:name "Nicholas J. Car" ;
-        sdo:identifier <http://orcid.org/0000-0002-8742-7730> ;
-        sdo:affiliation [
-            sdo:name "SURROUND Australia Pty Ldt." ;
-            sdo:url "https://surroundaustralia.com"^^xsd:anyURI ;
+    schema:creator [
+        schema:name "Nicholas J. Car" ;
+        schema:identifier <http://orcid.org/0000-0002-8742-7730> ;
+        schema:email "nick@kurrawong.ai"^^xsd:anyURI ;
+        schema:affiliation [
+            schema:name "KurrawongAI" ;
+            schema:url "https://kurrawong.ai"^^xsd:anyURI ;
         ] ;
     ] ;
 .
@@ -202,12 +203,13 @@ python -m pytest tests --disable-warnings
 
 ## Releases
 
-**Current release:** **3.2.1**
+**Current release:** **3.2.3**
 
 ### Release Schedule
 
 | Version | Date             | Description                                                                     |
 |---------|------------------|---------------------------------------------------------------------------------|
+| 3.2.3   | 27 January 2026  | Updating dependencies & release procedure. Tidy testing cleanup                 |
 | 3.2.1   | 31 January 2025  | Fix version number in version.py                                                |
 | 3.2.0   | 27 July 2024     | dependency updates and merged multiple small PRs                                |
 | 3.1.4   | 6 April 2024     | Fix load_ontology function's detection of data input                            |
@@ -274,7 +276,7 @@ Nicholas Car
     * `poetry build`
     * `poetry publish -u __token__ -p {TOKEN}`
 9. make a GitHub release
-    * include `/bin` build artifacts
-9. increment version number to next release in `pyproject.toml`
-10. commit all changes `$ git commit -a "..."`
-11. push changes `$ git push`
+    * include `/dist` build artefacts
+10. increment version number to next release in `pyproject.toml`
+11. commit all changes `$ git commit -a "..."`
+12. push changes `$ git push`

{pylode-3.2.2 → pylode-3.3.3}/pylode/__init__.py

@@ -3,4 +3,3 @@ from .rdf_elements import *
 from .utils import *
 from .utils import PylodeError
 from .version import __version__
-

{pylode-3.2.2 → pylode-3.3.3}/pylode/profiles/supermodel/query/__init__.py

@@ -405,6 +405,11 @@ class Query:
         self.root_profile_iri = get_root_profile_iri(graph)
         self.db = load_profiles(self.root_profile_iri, graph.serialize())
         self.graph = self.db.root_graph
+
+        # We need this to see the prefixes in the loaded file
+        for prefix, namespace in graph.namespace_manager.namespaces():
+            self.graph.namespace_manager.bind(prefix, namespace, override=True)
+
         self.debug = True if (None, LODE.debug, None) in self.db.config_graph else False
 
         # An IRI index of classes that 'exist' within this documentation.

{pylode-3.2.2 → pylode-3.3.3}/pylode/utils.py

@@ -296,6 +296,11 @@ def sort_ontology(ont_orig: Graph) -> Graph:
     trpls = ont_orig.triples((None, None, None))
     trpls_srt = sorted(trpls)
     ont_sorted = Graph(bind_namespaces="core")
+
+    # Recover the namespaces from the original file
+    for prefix, namespace in ont_orig.namespace_manager.namespaces():
+        ont_sorted.namespace_manager.bind(prefix, namespace, override=True)
+
     for trpl in trpls_srt:
         ont_sorted.add(trpl)
     return ont_sorted

pylode-3.3.3/pylode/version.py

@@ -0,0 +1,3 @@
+import importlib.metadata
+
+__version__ = importlib.metadata.version(__package__)

pylode-3.3.3/pyproject.toml

@@ -0,0 +1,55 @@
+[project.urls]
+Homepage = "https://github.com/RDFLib/pyLODE"
+Documentation = "https://github.com/RDFLib/pyLODE"
+Source = "https://github.com/RDFLib/pyLODE"
+Changelog = "https://github.com/RDFLib/pyLODE/releases"
+
+
+[project]
+name = "pylode"
+version = "3.3.3"
+description = "An OWL ontology documentation tool using Python, based on LODE."
+authors = [{ name = "Nicholas Car", email = "nick@kurrawong.ai" }]
+requires-python = ">=3.9,<4"
+readme = "README.md"
+license = "BSD-3-Clause"
+classifiers = [
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
+    "Programming Language :: Python :: 3.14",
+]
+dependencies = [
+    "rdflib>=7.5.0,<8.0.0",
+    "Markdown>=3.3.7,<4",
+    "dominate>=2.6.0,<3",
+    "html5lib>=1.1,<2",
+    "httpx>=0.25.0,<1.0.0",
+]
+
+[project.scripts]
+pylode = "pylode.cli:main"
+
+[dependency-groups]
+dev = [
+    "pytest>=7.2.0,<8",
+    "ruff>=0.9.0",
+    "pyinstaller>=6.0,<7 ; python_full_version >= '3.9' and python_full_version < '3.11'",
+]
+
+[tool.uv]
+required-version = ">=0.7.9"
+default-groups = "all"
+
+[tool.uv.build-backend]
+module-root = ""
+
+[build-system]
+requires = ["uv_build>=0.9.1,<0.10.0"]
+build-backend = "uv_build"
+
+[tool.ruff.lint]
+extend-select = ["I"]

pylode-3.2.2/LICENSE

@@ -1,29 +0,0 @@
-BSD 3-Clause License
-
-Copyright (c) 2002-2021, RDFLib Team
-All rights reserved.
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions are met:
-
-1. Redistributions of source code must retain the above copyright notice, this
-   list of conditions and the following disclaimer.
-
-2. Redistributions in binary form must reproduce the above copyright notice,
-   this list of conditions and the following disclaimer in the documentation
-   and/or other materials provided with the distribution.
-
-3. Neither the name of the copyright holder nor the names of its
-   contributors may be used to endorse or promote products derived from
-   this software without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
-AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
-IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
-DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
-FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
-DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
-SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
-CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
-OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
-OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

pylode-3.2.2/pylode/version.py

@@ -1,3 +0,0 @@
-import importlib.metadata
-
-__version__ = importlib.metadata.version(__package__)

pylode-3.2.2/pyproject.toml

@@ -1,30 +0,0 @@
-[tool.poetry]
-name = "pylode"
-version = "3.2.2"
-description = "An OWL ontology documentation tool using Python, based on LODE."
-authors = ["Nicholas Car <nick@kurrawong.net>"]
-readme = "README.md"
-
-[tool.poetry.dependencies]
-python = "^3.9"
-rdflib = ">=7.0.0,<8.0.0"
-Markdown = "^3.3.7"
-dominate = "^2.6.0"
-html5lib = "^1.1"
-httpx = ">=0.25.0,<1.0.0"
-
-[tool.poetry.scripts]
-pylode = "pylode.cli:main"
-
-[tool.poetry.group.dev.dependencies]
-pytest = "^7.2.0"
-black = "^24.3.0"
-flake8 = "^4.0.1"
-pyinstaller = { version = "^6.0", python = ">=3.9,<3.11" }
-
-[build-system]
-requires = ["poetry-core>=1.0.0"]
-build-backend = "poetry.core.masonry.api"
-
-[tool.poetry.group.lint.dependencies]
-ruff = "0.14.3"