pylineament 0.1.1__tar.gz → 0.1.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -0,0 +1,21 @@
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+ MIT License
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+
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+ Copyright (c) 2025 epokus
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
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+ Metadata-Version: 2.4
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+ Name: pylineament
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+ Version: 0.1.2
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+ Summary: Python Geological Lineament extraction package
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+ Author-email: Epo Kusumah <epo.pk@universiaspertamina.ac.id>
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+ License-Expression: MIT
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+ Project-URL: Homepage, https://github.com/epokus/pylineament
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: affine==2.4.0
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+ Requires-Dist: attrs==25.4.0
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+ Requires-Dist: certifi==2025.10.5
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+ Requires-Dist: click==8.3.0
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+ Requires-Dist: click-plugins==1.1.1.2
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+ Requires-Dist: cligj==0.7.2
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+ Requires-Dist: colorama==0.4.6
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+ Requires-Dist: fiona==1.10.1
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+ Requires-Dist: imageio==2.37.0
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+ Requires-Dist: joblib==1.5.2
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+ Requires-Dist: lazy_loader==0.4
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+ Requires-Dist: networkx==3.4.2
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+ Requires-Dist: numpy==2.2.6
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+ Requires-Dist: packaging==25.0
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+ Requires-Dist: pandas==2.3.3
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+ Requires-Dist: pillow==12.0.0
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+ Requires-Dist: pyparsing==3.2.5
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+ Requires-Dist: PyQt5==5.15.11
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+ Requires-Dist: PyQt5-Qt5==5.15.2
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+ Requires-Dist: PyQt5_sip==12.17.1
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+ Requires-Dist: pyqtgraph==0.13.7
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+ Requires-Dist: python-dateutil==2.9.0.post0
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+ Requires-Dist: pytz==2025.2
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+ Requires-Dist: rasterio==1.4.3
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+ Requires-Dist: scikit-image==0.25.2
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+ Requires-Dist: scikit-learn==1.7.2
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+ Requires-Dist: scipy==1.15.3
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+ Requires-Dist: six==1.17.0
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+ Requires-Dist: threadpoolctl==3.6.0
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+ Requires-Dist: tifffile==2025.5.10
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+ Requires-Dist: tzdata==2025.2
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+ Dynamic: license-file
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+
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+ # PyLineament
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+
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+ **PyLineament** is a Python-based, open-source toolkit for **automatic and regional-scale lineament extraction** from Digital Elevation Models (DEMs) and remote sensing imagery.
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+
47
+ It is designed for geological and geomorphological analysis — providing a **fully automated, reproducible**, and **scalable** workflow for extracting, reducing, and mapping lineaments across local to regional scales.
48
+
49
+ ---
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+
51
+ ## Installation
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+
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+ ```bash
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+ pip install pylineament
55
+ ```
56
+ Or from source:
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+
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+ ```bash
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+ git clone https://github.com/epokus/pylineament.git
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+ cd pylineament
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+ pip install -e .
62
+ ```
63
+
64
+ ## Quick Start (Command Line)
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+
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+ Once installed, simply open your terminal or command prompt and run:
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+
68
+ ```bash
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+ pylineament
70
+ ```
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+
72
+ ## Key Features
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+ - Interactive UI — Run `pylineament` in the terminal to open the GUI.
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+ - Automated Workflow — Full end-to-end lineament extraction.
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+ - Customizable Parameters — Control edge detection thresholds, segment length, and merging distance.
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+ - Multi-Resolution Support — Works with various DEM/image resolutions.
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+ - Scalable — Efficient for large-area or regional-scale mapping.
78
+ - Reproducible — Transparent parameters and open-source implementation.
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+
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+ ## Core Functions
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+ | Function | Description |
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+ | ---------------------------- | ------------------------------------------------------------ |
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+ | `read_raster()` | Reads and preprocesses a raster (DEM or image). |
84
+ | `extract_lineament_points()` | Detects lineament-like edge points using gradient filters. |
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+ | `convert_points_to_line()` | Converts clustered edge points into connected line segments. |
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+ | `reduce_lines()` | Simplifies and merges overlapping or redundant lineaments. |
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+ | `hillshade()` | Generates a hillshade image for visualization. |
88
+ | `dem_to_line()` | Extracts lineaments directly from a DEM file. |
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+ | `dem_to_shp()` | Full workflow: extract + merge + export to shapefile. |
90
+
91
+
92
+ ## Example Workflow
93
+ - Input your DEM or satellite image.
94
+ - Optionally apply hillshade() or downscale for efficiency.
95
+ - Extract edge points using extract_lineament_points().
96
+ - Convert points to lines and merge them with reduce_lines().
97
+ - Save as shapefile using dem_to_shp() or merge_lines_csv_to_shp().
98
+
99
+ ## example how to use this Library with CLI or python
100
+
101
+ ```python
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+ from pylineament import dem_to_shp
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+ dem_to_shp("data/srtm_sample.tif", shp_name= "lineamentsExtract")
104
+ ```
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+ shp file will be saved in "lineamentsExtract" folder.
106
+ see more examples in example folder
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+ ![PyLineament UI Preview](examples/lienament_extracted.png)
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+
109
+
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+ ## Parameters Overview
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+ | Parameter | Description | Typical Range |
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+ | ------------ | ------------------------------------- | ----------------- |
113
+ | `eps` | Edge detection sensitivity | 0.8 – 2.0 |
114
+ | `thresh` | Edge detection threshold | 20 – 80 |
115
+ | `z_multip` | Vertical exaggeration factor | 0.5 – 2.0 |
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+ | `min_dist` | Minimum distance between merged lines | 5 – 20 pixels |
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+ | `seg_len` | Minimum segment length | 5 – 20 pixels |
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+ | `split_size` | DEM/image tile size for processing | 250 – 1000 pixels |
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+
120
+
121
+
122
+ ## Why PyLineament?
123
+ Typical “automatic” lineament extraction tools are limited by:
124
+ - Fixed image resolution and poor scalability,
125
+ - Heavy preprocessing requirements,
126
+ - Loss of geological meaning across scales,
127
+ - Slow performance in large regions.
128
+
129
+ ## PyLineament addresses these by providing:
130
+ - Automated but parameter-controllable extraction,
131
+ - Multi-resolution and downscaling support,
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+ - Robust reduction and merging algorithms,
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+ - Compatibility with both small-area (detailed) and large-area datasets (regional mapping).
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+
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+ ## Citation
136
+ If you use PyLineament in your research, please cite:
137
+ Prasetya Kusumah, E. (2025). PyLineament: A Python Toolkit for Regional-Scale Lineament Extraction.
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+ Version 1.0. https://github.com/epokus/pylineament
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+
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+ ## License
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+ This project is licensed under the MIT License — see the LICENSE
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+ file for details.
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+
@@ -0,0 +1,101 @@
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+ # PyLineament
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+
3
+ **PyLineament** is a Python-based, open-source toolkit for **automatic and regional-scale lineament extraction** from Digital Elevation Models (DEMs) and remote sensing imagery.
4
+
5
+ It is designed for geological and geomorphological analysis — providing a **fully automated, reproducible**, and **scalable** workflow for extracting, reducing, and mapping lineaments across local to regional scales.
6
+
7
+ ---
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+
9
+ ## Installation
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+
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+ ```bash
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+ pip install pylineament
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+ ```
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+ Or from source:
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+
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+ ```bash
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+ git clone https://github.com/epokus/pylineament.git
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+ cd pylineament
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+ pip install -e .
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+ ```
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+
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+ ## Quick Start (Command Line)
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+
24
+ Once installed, simply open your terminal or command prompt and run:
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+
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+ ```bash
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+ pylineament
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+ ```
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+
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+ ## Key Features
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+ - Interactive UI — Run `pylineament` in the terminal to open the GUI.
32
+ - Automated Workflow — Full end-to-end lineament extraction.
33
+ - Customizable Parameters — Control edge detection thresholds, segment length, and merging distance.
34
+ - Multi-Resolution Support — Works with various DEM/image resolutions.
35
+ - Scalable — Efficient for large-area or regional-scale mapping.
36
+ - Reproducible — Transparent parameters and open-source implementation.
37
+
38
+ ## Core Functions
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+ | Function | Description |
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+ | ---------------------------- | ------------------------------------------------------------ |
41
+ | `read_raster()` | Reads and preprocesses a raster (DEM or image). |
42
+ | `extract_lineament_points()` | Detects lineament-like edge points using gradient filters. |
43
+ | `convert_points_to_line()` | Converts clustered edge points into connected line segments. |
44
+ | `reduce_lines()` | Simplifies and merges overlapping or redundant lineaments. |
45
+ | `hillshade()` | Generates a hillshade image for visualization. |
46
+ | `dem_to_line()` | Extracts lineaments directly from a DEM file. |
47
+ | `dem_to_shp()` | Full workflow: extract + merge + export to shapefile. |
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+
49
+
50
+ ## Example Workflow
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+ - Input your DEM or satellite image.
52
+ - Optionally apply hillshade() or downscale for efficiency.
53
+ - Extract edge points using extract_lineament_points().
54
+ - Convert points to lines and merge them with reduce_lines().
55
+ - Save as shapefile using dem_to_shp() or merge_lines_csv_to_shp().
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+
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+ ## example how to use this Library with CLI or python
58
+
59
+ ```python
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+ from pylineament import dem_to_shp
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+ dem_to_shp("data/srtm_sample.tif", shp_name= "lineamentsExtract")
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+ ```
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+ shp file will be saved in "lineamentsExtract" folder.
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+ see more examples in example folder
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+ ![PyLineament UI Preview](examples/lienament_extracted.png)
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+
67
+
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+ ## Parameters Overview
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+ | Parameter | Description | Typical Range |
70
+ | ------------ | ------------------------------------- | ----------------- |
71
+ | `eps` | Edge detection sensitivity | 0.8 – 2.0 |
72
+ | `thresh` | Edge detection threshold | 20 – 80 |
73
+ | `z_multip` | Vertical exaggeration factor | 0.5 – 2.0 |
74
+ | `min_dist` | Minimum distance between merged lines | 5 – 20 pixels |
75
+ | `seg_len` | Minimum segment length | 5 – 20 pixels |
76
+ | `split_size` | DEM/image tile size for processing | 250 – 1000 pixels |
77
+
78
+
79
+
80
+ ## Why PyLineament?
81
+ Typical “automatic” lineament extraction tools are limited by:
82
+ - Fixed image resolution and poor scalability,
83
+ - Heavy preprocessing requirements,
84
+ - Loss of geological meaning across scales,
85
+ - Slow performance in large regions.
86
+
87
+ ## PyLineament addresses these by providing:
88
+ - Automated but parameter-controllable extraction,
89
+ - Multi-resolution and downscaling support,
90
+ - Robust reduction and merging algorithms,
91
+ - Compatibility with both small-area (detailed) and large-area datasets (regional mapping).
92
+
93
+ ## Citation
94
+ If you use PyLineament in your research, please cite:
95
+ Prasetya Kusumah, E. (2025). PyLineament: A Python Toolkit for Regional-Scale Lineament Extraction.
96
+ Version 1.0. https://github.com/epokus/pylineament
97
+
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+ ## License
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+ This project is licensed under the MIT License — see the LICENSE
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+ file for details.
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+
@@ -764,8 +764,8 @@ def dem_to_shp(im_path,
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764
  downscale = 1,
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  shp_name = None,
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  save_to_file=True,
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- keep_intermediate_file = False,
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- n_job = -1):
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+
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+ keep_intermediate_file = False):
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769
  """
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770
  Extract lineaments from a (large) DEM and export results as a shapefile.
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771
  This will involve image splitting, and the use of parallel computing to achieve calculation efficiency.
@@ -829,7 +829,7 @@ def dem_to_shp(im_path,
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829
  [True]*len(flist))).values
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830
 
831
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  from joblib import Parallel, delayed
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- Parallel(n_jobs=n_job)(delayed(dem_to_line)(*c) for c in cases)
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+ Parallel(n_jobs=-1)(delayed(dem_to_line)(*c) for c in cases)
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833
 
834
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  fname = im_path.split('\\')[-1].split('.')[0]
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  csv_name = f'{tempfolder}\\{fname}.csv'
@@ -13,8 +13,7 @@ from PyQt5.QtWidgets import (QApplication,
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  QLabel,
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  QComboBox,
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  QCheckBox,
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- QSplitter,
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- QMessageBox )
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+ QSplitter )
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17
 
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18
  from PyQt5.QtCore import QThreadPool, QRunnable
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19
 
@@ -100,8 +99,6 @@ class MainWindow(QMainWindow):
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  self.previewRegen.clicked.connect(self.previewRegenActionAndSmallCalc)
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  self.extractButon.clicked.connect(self.extractLineamentAction)
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101
 
103
- self.aboutButton.clicked.connect(self.aboutAction)
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-
105
102
  self.previewImageOverlaySelector.currentIndexChanged.connect(self.previewRegenAction)
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103
  self.previewRegionSelector.currentIndexChanged.connect(self.previewRegenAction)
107
104
  self.hillshadeAngleSelector.currentIndexChanged.connect(self.previewRegenAction)
@@ -151,9 +148,6 @@ class MainWindow(QMainWindow):
151
148
 
152
149
  self.resetButton = QPushButton('Reset to Default')
153
150
  self.previewRegen = QPushButton('Regenerate Preview')
154
- self.aboutButton = QPushButton('?')
155
- self.aboutButton.setMaximumWidth(20)
156
-
157
151
  self.extractButon = QPushButton('Extract Lineament')
158
152
 
159
153
  self.subsetSideSlider, subsetSideLabel, subsetSideLayout = self.add_slider("Image Subset size", 500, 100, 2000, 50)
@@ -261,7 +255,6 @@ class MainWindow(QMainWindow):
261
255
  leftLayout.addWidget(self.resetButton)
262
256
  # leftLayout.addWidget(self.previewRegen)
263
257
  leftLayout.addStretch()
264
- leftLayout.addWidget(self.aboutButton)
265
258
  leftLayout.addWidget(self.extractButon)
266
259
 
267
260
 
@@ -450,6 +443,7 @@ class MainWindow(QMainWindow):
450
443
  hs = hs.replace(' ', '').split('-')
451
444
  avgAng = (float(hs[0]) + float(hs[1])) /2
452
445
 
446
+
453
447
  if overlay == 'original image':
454
448
  img = self.demSubset
455
449
 
@@ -781,29 +775,6 @@ class MainWindow(QMainWindow):
781
775
  os.removedirs(tempfolder)
782
776
 
783
777
 
784
- def aboutAction(self):
785
- msg = QMessageBox(self)
786
- msg.setWindowTitle("About PyLineament")
787
- msg.setTextFormat(Qt.RichText) # enable HTML formatting
788
- msg.setTextInteractionFlags(Qt.TextSelectableByMouse | Qt.LinksAccessibleByMouse)
789
- msg.setStandardButtons(QMessageBox.Ok)
790
- msg.setText(
791
- """<b>PyLineament</b><br><br>
792
- PyLineament is an open-source Python toolkit for
793
- <b>automatic and regional-scale lineament extraction</b>
794
- from DEMs and remote sensing imagery.<br><br>
795
- Version: 1.0.0<br>
796
- Author: Epo Prasetya Kusumah - Universitas Pertamina<br>
797
- License: MIT<br>
798
- GitHub: <a href='https://github.com/epokus/pylineament'>github.com/epokus/pylineament</a><br><br>
799
- <b>How to cite:</b><br>
800
- Kusumah, E. P., (2025). <i>PyLineament: A Python Toolkit for Regional-Scale Lineament Extraction</i>.
801
- Version 1.0. <a href='https://github.com/epokus/pylineament'>https://github.com/epokus/pylineament</a><br><br>
802
- © 2025 PyLineament Developers
803
- """
804
- )
805
- msg.exec_()
806
-
807
778
  def main():
808
779
  app = QApplication(sys.argv)
809
780
  window = MainWindow()
@@ -813,3 +784,5 @@ def main():
813
784
 
814
785
  if __name__ == "__main__":
815
786
  main()
787
+
788
+
@@ -0,0 +1,143 @@
1
+ Metadata-Version: 2.4
2
+ Name: pylineament
3
+ Version: 0.1.2
4
+ Summary: Python Geological Lineament extraction package
5
+ Author-email: Epo Kusumah <epo.pk@universiaspertamina.ac.id>
6
+ License-Expression: MIT
7
+ Project-URL: Homepage, https://github.com/epokus/pylineament
8
+ Description-Content-Type: text/markdown
9
+ License-File: LICENSE
10
+ Requires-Dist: affine==2.4.0
11
+ Requires-Dist: attrs==25.4.0
12
+ Requires-Dist: certifi==2025.10.5
13
+ Requires-Dist: click==8.3.0
14
+ Requires-Dist: click-plugins==1.1.1.2
15
+ Requires-Dist: cligj==0.7.2
16
+ Requires-Dist: colorama==0.4.6
17
+ Requires-Dist: fiona==1.10.1
18
+ Requires-Dist: imageio==2.37.0
19
+ Requires-Dist: joblib==1.5.2
20
+ Requires-Dist: lazy_loader==0.4
21
+ Requires-Dist: networkx==3.4.2
22
+ Requires-Dist: numpy==2.2.6
23
+ Requires-Dist: packaging==25.0
24
+ Requires-Dist: pandas==2.3.3
25
+ Requires-Dist: pillow==12.0.0
26
+ Requires-Dist: pyparsing==3.2.5
27
+ Requires-Dist: PyQt5==5.15.11
28
+ Requires-Dist: PyQt5-Qt5==5.15.2
29
+ Requires-Dist: PyQt5_sip==12.17.1
30
+ Requires-Dist: pyqtgraph==0.13.7
31
+ Requires-Dist: python-dateutil==2.9.0.post0
32
+ Requires-Dist: pytz==2025.2
33
+ Requires-Dist: rasterio==1.4.3
34
+ Requires-Dist: scikit-image==0.25.2
35
+ Requires-Dist: scikit-learn==1.7.2
36
+ Requires-Dist: scipy==1.15.3
37
+ Requires-Dist: six==1.17.0
38
+ Requires-Dist: threadpoolctl==3.6.0
39
+ Requires-Dist: tifffile==2025.5.10
40
+ Requires-Dist: tzdata==2025.2
41
+ Dynamic: license-file
42
+
43
+ # PyLineament
44
+
45
+ **PyLineament** is a Python-based, open-source toolkit for **automatic and regional-scale lineament extraction** from Digital Elevation Models (DEMs) and remote sensing imagery.
46
+
47
+ It is designed for geological and geomorphological analysis — providing a **fully automated, reproducible**, and **scalable** workflow for extracting, reducing, and mapping lineaments across local to regional scales.
48
+
49
+ ---
50
+
51
+ ## Installation
52
+
53
+ ```bash
54
+ pip install pylineament
55
+ ```
56
+ Or from source:
57
+
58
+ ```bash
59
+ git clone https://github.com/epokus/pylineament.git
60
+ cd pylineament
61
+ pip install -e .
62
+ ```
63
+
64
+ ## Quick Start (Command Line)
65
+
66
+ Once installed, simply open your terminal or command prompt and run:
67
+
68
+ ```bash
69
+ pylineament
70
+ ```
71
+
72
+ ## Key Features
73
+ - Interactive UI — Run `pylineament` in the terminal to open the GUI.
74
+ - Automated Workflow — Full end-to-end lineament extraction.
75
+ - Customizable Parameters — Control edge detection thresholds, segment length, and merging distance.
76
+ - Multi-Resolution Support — Works with various DEM/image resolutions.
77
+ - Scalable — Efficient for large-area or regional-scale mapping.
78
+ - Reproducible — Transparent parameters and open-source implementation.
79
+
80
+ ## Core Functions
81
+ | Function | Description |
82
+ | ---------------------------- | ------------------------------------------------------------ |
83
+ | `read_raster()` | Reads and preprocesses a raster (DEM or image). |
84
+ | `extract_lineament_points()` | Detects lineament-like edge points using gradient filters. |
85
+ | `convert_points_to_line()` | Converts clustered edge points into connected line segments. |
86
+ | `reduce_lines()` | Simplifies and merges overlapping or redundant lineaments. |
87
+ | `hillshade()` | Generates a hillshade image for visualization. |
88
+ | `dem_to_line()` | Extracts lineaments directly from a DEM file. |
89
+ | `dem_to_shp()` | Full workflow: extract + merge + export to shapefile. |
90
+
91
+
92
+ ## Example Workflow
93
+ - Input your DEM or satellite image.
94
+ - Optionally apply hillshade() or downscale for efficiency.
95
+ - Extract edge points using extract_lineament_points().
96
+ - Convert points to lines and merge them with reduce_lines().
97
+ - Save as shapefile using dem_to_shp() or merge_lines_csv_to_shp().
98
+
99
+ ## example how to use this Library with CLI or python
100
+
101
+ ```python
102
+ from pylineament import dem_to_shp
103
+ dem_to_shp("data/srtm_sample.tif", shp_name= "lineamentsExtract")
104
+ ```
105
+ shp file will be saved in "lineamentsExtract" folder.
106
+ see more examples in example folder
107
+ ![PyLineament UI Preview](examples/lienament_extracted.png)
108
+
109
+
110
+ ## Parameters Overview
111
+ | Parameter | Description | Typical Range |
112
+ | ------------ | ------------------------------------- | ----------------- |
113
+ | `eps` | Edge detection sensitivity | 0.8 – 2.0 |
114
+ | `thresh` | Edge detection threshold | 20 – 80 |
115
+ | `z_multip` | Vertical exaggeration factor | 0.5 – 2.0 |
116
+ | `min_dist` | Minimum distance between merged lines | 5 – 20 pixels |
117
+ | `seg_len` | Minimum segment length | 5 – 20 pixels |
118
+ | `split_size` | DEM/image tile size for processing | 250 – 1000 pixels |
119
+
120
+
121
+
122
+ ## Why PyLineament?
123
+ Typical “automatic” lineament extraction tools are limited by:
124
+ - Fixed image resolution and poor scalability,
125
+ - Heavy preprocessing requirements,
126
+ - Loss of geological meaning across scales,
127
+ - Slow performance in large regions.
128
+
129
+ ## PyLineament addresses these by providing:
130
+ - Automated but parameter-controllable extraction,
131
+ - Multi-resolution and downscaling support,
132
+ - Robust reduction and merging algorithms,
133
+ - Compatibility with both small-area (detailed) and large-area datasets (regional mapping).
134
+
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+ ## Citation
136
+ If you use PyLineament in your research, please cite:
137
+ Prasetya Kusumah, E. (2025). PyLineament: A Python Toolkit for Regional-Scale Lineament Extraction.
138
+ Version 1.0. https://github.com/epokus/pylineament
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+
140
+ ## License
141
+ This project is licensed under the MIT License — see the LICENSE
142
+ file for details.
143
+
@@ -1,3 +1,4 @@
1
+ LICENSE
1
2
  README.md
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  pyproject.toml
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  pylineament/__init__.py
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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4
 
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  [project]
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  name = "pylineament"
7
- version = "0.1.1"
7
+ version = "0.1.2"
8
8
  description = "Python Geological Lineament extraction package"
9
9
  readme = "README.md"
10
10
  authors = [{ name="Epo Kusumah", email="epo.pk@universiaspertamina.ac.id" }]
@@ -50,3 +50,4 @@ Homepage = "https://github.com/epokus/pylineament"
50
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  pylineament = "pylineament.pylineament_ui:main"
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+
@@ -1,39 +0,0 @@
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File without changes