pyhdf5-handler 0.10__tar.gz → 0.11__tar.gz

{pyhdf5_handler-0.10 → pyhdf5_handler-0.11}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.4
+Metadata-Version: 2.5
 Name: pyhdf5_handler
-Version: 0.10
+Version: 0.11
 Summary: A Python library to read and write data to HDF5 format. This library is based on the h5py (https://docs.h5py.org/en/stable/index.html) and has been developed by Maxime Jay-Allemand at Hydris hydrologie (https://www.hydris-hydrologie.fr/)
 Project-URL: Homepage, https://codeberg.org/maximejay/pyhdf5_handler
 Project-URL: Issues, https://codeberg.org/maximejay/pyhdf5_handler/issues
@@ -111,6 +111,9 @@ pyhdf5_handler.save_dict_to_hdf5file("./test.hdf5", dictionary)
 ```
 Function argument `location` can be used to save the dictionary in a specific group. the group will be created if not exist. The function argument `replace` can be used to replace the HDF5 file, by default pyhdf5_handler will append to it.
 
+
+#### Reading an HDF5 file as Python dictionary
+
 Reading an hdf5 is easy. Just use the function `pyhdf5_handler.src.hdf5_handler.read_hdf5file_as_dict`:
 
 ```python

{pyhdf5_handler-0.10 → pyhdf5_handler-0.11}/README.md

@@ -94,6 +94,9 @@ pyhdf5_handler.save_dict_to_hdf5file("./test.hdf5", dictionary)
 ```
 Function argument `location` can be used to save the dictionary in a specific group. the group will be created if not exist. The function argument `replace` can be used to replace the HDF5 file, by default pyhdf5_handler will append to it.
 
+
+#### Reading an HDF5 file as Python dictionary
+
 Reading an hdf5 is easy. Just use the function `pyhdf5_handler.src.hdf5_handler.read_hdf5file_as_dict`:
 
 ```python

{pyhdf5_handler-0.10 → pyhdf5_handler-0.11}/Release_note.txt

@@ -1,8 +1,9 @@
+v0.11: thur Aug 20 12:02:40 2026 +0200
+- Improvement : writting and reading a pandas dataframe keep the original dataframe index.
 
 v0.10: Fri Jul 31 17:30:46 2026 +0200
 - Improvement : writting and reading a pandas dataframe and a numpy ndarray no longer save and read it in a specific subgroup.
 
-
 v0.9 : 23-07-2026
 - fix: handle dtype with panda dataframe: read/write
 

{pyhdf5_handler-0.10 → pyhdf5_handler-0.11}/pyhdf5_handler/src/hdf5_handler.py

@@ -412,6 +412,9 @@ def _hdf5_handle_PandaDataFrame(
     keys = _hdf5_handle_array("columns", np.array(list(value.columns)))
     _hdf5_create_dataset(hdf5_data, keys)
 
+    index = _hdf5_handle_array("index", np.array(list(value.index)))
+    _hdf5_create_dataset(hdf5_data, index)
+
     dataset = _hdf5_handle_array("array", value.to_numpy())
     _hdf5_create_dataset(hdf5_data, dataset)
 
@@ -670,6 +673,7 @@ def _read_pd_dataframe(hdf5):
 
     if "_Pandas_DataFrame" in list(hdf5.attrs.keys()):
         columns = hdf5["columns"][:]
+        index = hdf5["index"][:]
         array = hdf5["array"][:]
         dtype = hdf5["dtype"][:]
 
@@ -677,7 +681,16 @@ def _read_pd_dataframe(hdf5):
     for i, col in enumerate(columns):
         newdict.update({col.decode(): array[:, i].astype(dtype[i])})
 
-    return pd.DataFrame(newdict)
+    panda_df = pd.DataFrame(newdict)
+
+    if index.dtype.type is np.bytes_:
+        index = index.astype("str")
+    elif index.dtype.type is np.object_:
+        index = index.astype("str")
+
+    panda_df.index = index
+
+    return panda_df
 
 
 def _read_ndarray_datastructure(hdf5):

{pyhdf5_handler-0.10 → pyhdf5_handler-0.11}/pyhdf5_handler/tutorial/hdf5_io_tests.py

@@ -174,7 +174,8 @@ if __name__ == "__main__":
                 {
                     "column1": np.array(["A", "B", "C"]),
                     "column2": np.array([4, 5, 6]),
-                }
+                },
+                index=["index1", "index2", "index3"],
             )
         },
     )
@@ -242,6 +243,13 @@ if __name__ == "__main__":
         search_attrs=False,
     )
 
+    pyhdf5_handler.get_hdf5file_item(
+        path_to_hdf5="./test.hdf5",
+        location="./",
+        item="mix_dtype_panda_dataframe",
+        search_attrs=False,
+    )
+
     pyhdf5_handler.get_hdf5file_item(
         path_to_hdf5="./test.hdf5",
         location="./",

{pyhdf5_handler-0.10 → pyhdf5_handler-0.11}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
 
 [project]
 name = "pyhdf5_handler"
-version = "0.10"
+version = "0.11"
 authors = [
   { name="Maxime Jay-Allemand", email="maxime.jay.allemand@hydris-hydrologie.fr" },
 ]