pyg-nightly 2.7.0.dev20250406__tar.gz → 2.7.0.dev20250407__tar.gz

{pyg_nightly-2.7.0.dev20250406 → pyg_nightly-2.7.0.dev20250407}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyg-nightly
-Version: 2.7.0.dev20250406
+Version: 2.7.0.dev20250407
 Summary: Graph Neural Network Library for PyTorch
 Keywords: deep-learning,pytorch,geometric-deep-learning,graph-neural-networks,graph-convolutional-networks
 Author-email: Matthias Fey <matthias@pyg.org>

{pyg_nightly-2.7.0.dev20250406 → pyg_nightly-2.7.0.dev20250407}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend="flit_core.buildapi"
 
 [project]
 name="pyg-nightly"
-version="2.7.0.dev20250406"
+version="2.7.0.dev20250407"
 authors=[
     {name="Matthias Fey", email="matthias@pyg.org"},
 ]

{pyg_nightly-2.7.0.dev20250406 → pyg_nightly-2.7.0.dev20250407}/torch_geometric/__init__.py

@@ -31,7 +31,7 @@ from .lazy_loader import LazyLoader
 contrib = LazyLoader('contrib', globals(), 'torch_geometric.contrib')
 graphgym = LazyLoader('graphgym', globals(), 'torch_geometric.graphgym')
 
-__version__ = '2.7.0.dev20250406'
+__version__ = '2.7.0.dev20250407'
 
 __all__ = [
     'Index',

pyg_nightly-2.7.0.dev20250407/torch_geometric/explain/algorithm/gnn_explainer.py

@@ -0,0 +1,674 @@
+from math import sqrt
+from typing import Dict, Optional, Tuple, Union, overload
+
+import torch
+from torch import Tensor
+from torch.nn.parameter import Parameter
+
+from torch_geometric.explain import (
+    ExplainerConfig,
+    Explanation,
+    HeteroExplanation,
+    ModelConfig,
+)
+from torch_geometric.explain.algorithm import ExplainerAlgorithm
+from torch_geometric.explain.algorithm.utils import (
+    clear_masks,
+    set_hetero_masks,
+    set_masks,
+)
+from torch_geometric.explain.config import MaskType, ModelMode, ModelTaskLevel
+from torch_geometric.typing import EdgeType, NodeType
+
+
+class GNNExplainer(ExplainerAlgorithm):
+    r"""The GNN-Explainer model from the `"GNNExplainer: Generating
+    Explanations for Graph Neural Networks"
+    <https://arxiv.org/abs/1903.03894>`_ paper for identifying compact subgraph
+    structures and node features that play a crucial role in the predictions
+    made by a GNN.
+
+    .. note::
+
+        For an example of using :class:`GNNExplainer`, see
+        `examples/explain/gnn_explainer.py <https://github.com/pyg-team/
+        pytorch_geometric/blob/master/examples/explain/gnn_explainer.py>`_,
+        `examples/explain/gnn_explainer_ba_shapes.py <https://github.com/
+        pyg-team/pytorch_geometric/blob/master/examples/
+        explain/gnn_explainer_ba_shapes.py>`_, and `examples/explain/
+        gnn_explainer_link_pred.py <https://github.com/pyg-team/
+        pytorch_geometric/blob/master/examples/explain/gnn_explainer_link_pred.py>`_.
+
+    .. note::
+
+        The :obj:`edge_size` coefficient is multiplied by the number of nodes
+        in the explanation at every iteration, and the resulting value is added
+        to the loss as a regularization term, with the goal of producing
+        compact explanations.
+        A higher value will push the algorithm towards explanations with less
+        elements.
+        Consider adjusting the :obj:`edge_size` coefficient according to the
+        average node degree in the dataset, especially if this value is bigger
+        than in the datasets used in the original paper.
+
+    Args:
+        epochs (int, optional): The number of epochs to train.
+            (default: :obj:`100`)
+        lr (float, optional): The learning rate to apply.
+            (default: :obj:`0.01`)
+        **kwargs (optional): Additional hyper-parameters to override default
+            settings in
+            :attr:`~torch_geometric.explain.algorithm.GNNExplainer.coeffs`.
+    """
+
+    coeffs = {
+        'edge_size': 0.005,
+        'edge_reduction': 'sum',
+        'node_feat_size': 1.0,
+        'node_feat_reduction': 'mean',
+        'edge_ent': 1.0,
+        'node_feat_ent': 0.1,
+        'EPS': 1e-15,
+    }
+
+    def __init__(self, epochs: int = 100, lr: float = 0.01, **kwargs):
+        super().__init__()
+        self.epochs = epochs
+        self.lr = lr
+        self.coeffs.update(kwargs)
+
+        self.node_mask = self.hard_node_mask = None
+        self.edge_mask = self.hard_edge_mask = None
+        self.is_hetero = False
+
+    @overload
+    def forward(
+        self,
+        model: torch.nn.Module,
+        x: Tensor,
+        edge_index: Tensor,
+        *,
+        target: Tensor,
+        index: Optional[Union[int, Tensor]] = None,
+        **kwargs,
+    ) -> Explanation:
+        ...
+
+    @overload
+    def forward(
+        self,
+        model: torch.nn.Module,
+        x: Dict[NodeType, Tensor],
+        edge_index: Dict[EdgeType, Tensor],
+        *,
+        target: Tensor,
+        index: Optional[Union[int, Tensor]] = None,
+        **kwargs,
+    ) -> HeteroExplanation:
+        ...
+
+    def forward(
+        self,
+        model: torch.nn.Module,
+        x: Union[Tensor, Dict[NodeType, Tensor]],
+        edge_index: Union[Tensor, Dict[EdgeType, Tensor]],
+        *,
+        target: Tensor,
+        index: Optional[Union[int, Tensor]] = None,
+        **kwargs,
+    ) -> Union[Explanation, HeteroExplanation]:
+        self.is_hetero = isinstance(x, dict)
+        self._train(model, x, edge_index, target=target, index=index, **kwargs)
+        explanation = self._create_explanation()
+        self._clean_model(model)
+        return explanation
+
+    def _create_explanation(self) -> Union[Explanation, HeteroExplanation]:
+        """Create an explanation object from the current masks."""
+        if self.is_hetero:
+            # For heterogeneous graphs, process each type separately
+            node_mask_dict = {}
+            edge_mask_dict = {}
+
+            for node_type, mask in self.node_mask.items():
+                if mask is not None:
+                    node_mask_dict[node_type] = self._post_process_mask(
+                        mask,
+                        self.hard_node_mask[node_type],
+                        apply_sigmoid=True,
+                    )
+
+            for edge_type, mask in self.edge_mask.items():
+                if mask is not None:
+                    edge_mask_dict[edge_type] = self._post_process_mask(
+                        mask,
+                        self.hard_edge_mask[edge_type],
+                        apply_sigmoid=True,
+                    )
+
+            # Create heterogeneous explanation
+            explanation = HeteroExplanation()
+            explanation.set_value_dict('node_mask', node_mask_dict)
+            explanation.set_value_dict('edge_mask', edge_mask_dict)
+
+        else:
+            # For homogeneous graphs, process single masks
+            node_mask = self._post_process_mask(
+                self.node_mask,
+                self.hard_node_mask,
+                apply_sigmoid=True,
+            )
+            edge_mask = self._post_process_mask(
+                self.edge_mask,
+                self.hard_edge_mask,
+                apply_sigmoid=True,
+            )
+
+            # Create homogeneous explanation
+            explanation = Explanation(node_mask=node_mask, edge_mask=edge_mask)
+
+        return explanation
+
+    def supports(self) -> bool:
+        return True
+
+    @overload
+    def _train(
+        self,
+        model: torch.nn.Module,
+        x: Tensor,
+        edge_index: Tensor,
+        *,
+        target: Tensor,
+        index: Optional[Union[int, Tensor]] = None,
+        **kwargs,
+    ) -> None:
+        ...
+
+    @overload
+    def _train(
+        self,
+        model: torch.nn.Module,
+        x: Dict[NodeType, Tensor],
+        edge_index: Dict[EdgeType, Tensor],
+        *,
+        target: Tensor,
+        index: Optional[Union[int, Tensor]] = None,
+        **kwargs,
+    ) -> None:
+        ...
+
+    def _train(
+        self,
+        model: torch.nn.Module,
+        x: Union[Tensor, Dict[NodeType, Tensor]],
+        edge_index: Union[Tensor, Dict[EdgeType, Tensor]],
+        *,
+        target: Tensor,
+        index: Optional[Union[int, Tensor]] = None,
+        **kwargs,
+    ) -> None:
+        # Initialize masks based on input type
+        self._initialize_masks(x, edge_index)
+
+        # Collect parameters for optimization
+        parameters = self._collect_parameters(model, edge_index)
+
+        # Create optimizer
+        optimizer = torch.optim.Adam(parameters, lr=self.lr)
+
+        # Training loop
+        for i in range(self.epochs):
+            optimizer.zero_grad()
+
+            # Forward pass with masked inputs
+            y_hat = self._forward_with_masks(model, x, edge_index, **kwargs)
+            y = target
+
+            # Handle index if provided
+            if index is not None:
+                y_hat, y = y_hat[index], y[index]
+
+            # Calculate loss
+            loss = self._loss(y_hat, y)
+
+            # Backward pass
+            loss.backward()
+            optimizer.step()
+
+            # In the first iteration, collect gradients to identify important
+            # nodes/edges
+            if i == 0:
+                self._collect_gradients()
+
+    def _collect_parameters(self, model, edge_index):
+        """Collect parameters for optimization."""
+        parameters = []
+
+        if self.is_hetero:
+            # For heterogeneous graphs, collect parameters from all types
+            for mask in self.node_mask.values():
+                if mask is not None:
+                    parameters.append(mask)
+            if any(v is not None for v in self.edge_mask.values()):
+                set_hetero_masks(model, self.edge_mask, edge_index)
+            for mask in self.edge_mask.values():
+                if mask is not None:
+                    parameters.append(mask)
+        else:
+            # For homogeneous graphs, collect single parameters
+            if self.node_mask is not None:
+                parameters.append(self.node_mask)
+            if self.edge_mask is not None:
+                set_masks(model, self.edge_mask, edge_index,
+                          apply_sigmoid=True)
+                parameters.append(self.edge_mask)
+
+        return parameters
+
+    @overload
+    def _forward_with_masks(
+        self,
+        model: torch.nn.Module,
+        x: Tensor,
+        edge_index: Tensor,
+        **kwargs,
+    ) -> Tensor:
+        ...
+
+    @overload
+    def _forward_with_masks(
+        self,
+        model: torch.nn.Module,
+        x: Dict[NodeType, Tensor],
+        edge_index: Dict[EdgeType, Tensor],
+        **kwargs,
+    ) -> Tensor:
+        ...
+
+    def _forward_with_masks(
+        self,
+        model: torch.nn.Module,
+        x: Union[Tensor, Dict[NodeType, Tensor]],
+        edge_index: Union[Tensor, Dict[EdgeType, Tensor]],
+        **kwargs,
+    ) -> Tensor:
+        """Forward pass with masked inputs."""
+        if self.is_hetero:
+            # Apply masks to heterogeneous inputs
+            h_dict = {}
+            for node_type, features in x.items():
+                if node_type in self.node_mask and self.node_mask[
+                        node_type] is not None:
+                    h_dict[node_type] = features * self.node_mask[
+                        node_type].sigmoid()
+                else:
+                    h_dict[node_type] = features
+
+            # Forward pass with masked features
+            return model(h_dict, edge_index, **kwargs)
+        else:
+            # Apply mask to homogeneous input
+            h = x if self.node_mask is None else x * self.node_mask.sigmoid()
+
+            # Forward pass with masked features
+            return model(h, edge_index, **kwargs)
+
+    def _initialize_masks(
+        self,
+        x: Union[Tensor, Dict[NodeType, Tensor]],
+        edge_index: Union[Tensor, Dict[EdgeType, Tensor]],
+    ) -> None:
+        node_mask_type = self.explainer_config.node_mask_type
+        edge_mask_type = self.explainer_config.edge_mask_type
+
+        if self.is_hetero:
+            # Initialize dictionaries for heterogeneous masks
+            self.node_mask = {}
+            self.hard_node_mask = {}
+            self.edge_mask = {}
+            self.hard_edge_mask = {}
+
+            # Initialize node masks for each node type
+            for node_type, features in x.items():
+                device = features.device
+                N, F = features.size()
+                self._initialize_node_mask(node_mask_type, node_type, N, F,
+                                           device)
+
+            # Initialize edge masks for each edge type
+            for edge_type, indices in edge_index.items():
+                device = indices.device
+                E = indices.size(1)
+                N = max(indices.max().item() + 1,
+                        max(feat.size(0) for feat in x.values()))
+                self._initialize_edge_mask(edge_mask_type, edge_type, E, N,
+                                           device)
+        else:
+            # Initialize masks for homogeneous graph
+            device = x.device
+            (N, F), E = x.size(), edge_index.size(1)
+
+            # Initialize homogeneous node and edge masks
+            self._initialize_homogeneous_masks(node_mask_type, edge_mask_type,
+                                               N, F, E, device)
+
+    def _initialize_node_mask(
+        self,
+        node_mask_type,
+        node_type,
+        N,
+        F,
+        device,
+    ) -> None:
+        """Initialize node mask for a specific node type."""
+        std = 0.1
+        if node_mask_type is None:
+            self.node_mask[node_type] = None
+            self.hard_node_mask[node_type] = None
+        elif node_mask_type == MaskType.object:
+            self.node_mask[node_type] = Parameter(
+                torch.randn(N, 1, device=device) * std)
+            self.hard_node_mask[node_type] = None
+        elif node_mask_type == MaskType.attributes:
+            self.node_mask[node_type] = Parameter(
+                torch.randn(N, F, device=device) * std)
+            self.hard_node_mask[node_type] = None
+        elif node_mask_type == MaskType.common_attributes:
+            self.node_mask[node_type] = Parameter(
+                torch.randn(1, F, device=device) * std)
+            self.hard_node_mask[node_type] = None
+        else:
+            raise ValueError(f"Invalid node mask type: {node_mask_type}")
+
+    def _initialize_edge_mask(self, edge_mask_type, edge_type, E, N, device):
+        """Initialize edge mask for a specific edge type."""
+        if edge_mask_type is None:
+            self.edge_mask[edge_type] = None
+            self.hard_edge_mask[edge_type] = None
+        elif edge_mask_type == MaskType.object:
+            std = torch.nn.init.calculate_gain('relu') * sqrt(2.0 / (2 * N))
+            self.edge_mask[edge_type] = Parameter(
+                torch.randn(E, device=device) * std)
+            self.hard_edge_mask[edge_type] = None
+        else:
+            raise ValueError(f"Invalid edge mask type: {edge_mask_type}")
+
+    def _initialize_homogeneous_masks(self, node_mask_type, edge_mask_type, N,
+                                      F, E, device):
+        """Initialize masks for homogeneous graph."""
+        # Initialize node mask
+        std = 0.1
+        if node_mask_type is None:
+            self.node_mask = None
+        elif node_mask_type == MaskType.object:
+            self.node_mask = Parameter(torch.randn(N, 1, device=device) * std)
+        elif node_mask_type == MaskType.attributes:
+            self.node_mask = Parameter(torch.randn(N, F, device=device) * std)
+        elif node_mask_type == MaskType.common_attributes:
+            self.node_mask = Parameter(torch.randn(1, F, device=device) * std)
+        else:
+            raise ValueError(f"Invalid node mask type: {node_mask_type}")
+
+        # Initialize edge mask
+        if edge_mask_type is None:
+            self.edge_mask = None
+        elif edge_mask_type == MaskType.object:
+            std = torch.nn.init.calculate_gain('relu') * sqrt(2.0 / (2 * N))
+            self.edge_mask = Parameter(torch.randn(E, device=device) * std)
+        else:
+            raise ValueError(f"Invalid edge mask type: {edge_mask_type}")
+
+    def _collect_gradients(self) -> None:
+        if self.is_hetero:
+            self._collect_hetero_gradients()
+        else:
+            self._collect_homo_gradients()
+
+    def _collect_hetero_gradients(self):
+        """Collect gradients for heterogeneous graph."""
+        for node_type, mask in self.node_mask.items():
+            if mask is not None:
+                if mask.grad is None:
+                    raise ValueError(
+                        f"Could not compute gradients for node masks of type "
+                        f"'{node_type}'. Please make sure that node masks are "
+                        f"used inside the model or disable it via "
+                        f"`node_mask_type=None`.")
+
+                self.hard_node_mask[node_type] = mask.grad != 0.0
+
+        for edge_type, mask in self.edge_mask.items():
+            if mask is not None:
+                if mask.grad is None:
+                    raise ValueError(
+                        f"Could not compute gradients for edge masks of type "
+                        f"'{edge_type}'. Please make sure that edge masks are "
+                        f"used inside the model or disable it via "
+                        f"`edge_mask_type=None`.")
+                self.hard_edge_mask[edge_type] = mask.grad != 0.0
+
+    def _collect_homo_gradients(self):
+        """Collect gradients for homogeneous graph."""
+        if self.node_mask is not None:
+            if self.node_mask.grad is None:
+                raise ValueError("Could not compute gradients for node "
+                                 "features. Please make sure that node "
+                                 "features are used inside the model or "
+                                 "disable it via `node_mask_type=None`.")
+            self.hard_node_mask = self.node_mask.grad != 0.0
+
+        if self.edge_mask is not None:
+            if self.edge_mask.grad is None:
+                raise ValueError("Could not compute gradients for edges. "
+                                 "Please make sure that edges are used "
+                                 "via message passing inside the model or "
+                                 "disable it via `edge_mask_type=None`.")
+            self.hard_edge_mask = self.edge_mask.grad != 0.0
+
+    def _loss(self, y_hat: Tensor, y: Tensor) -> Tensor:
+        # Calculate base loss based on model configuration
+        loss = self._calculate_base_loss(y_hat, y)
+
+        # Apply regularization based on graph type
+        if self.is_hetero:
+            # Apply regularization for heterogeneous graph
+            loss = self._apply_hetero_regularization(loss)
+        else:
+            # Apply regularization for homogeneous graph
+            loss = self._apply_homo_regularization(loss)
+
+        return loss
+
+    def _calculate_base_loss(self, y_hat, y):
+        """Calculate base loss based on model configuration."""
+        if self.model_config.mode == ModelMode.binary_classification:
+            return self._loss_binary_classification(y_hat, y)
+        elif self.model_config.mode == ModelMode.multiclass_classification:
+            return self._loss_multiclass_classification(y_hat, y)
+        elif self.model_config.mode == ModelMode.regression:
+            return self._loss_regression(y_hat, y)
+        else:
+            raise ValueError(f"Invalid model mode: {self.model_config.mode}")
+
+    def _apply_hetero_regularization(self, loss):
+        """Apply regularization for heterogeneous graph."""
+        # Apply regularization for each edge type
+        for edge_type, mask in self.edge_mask.items():
+            if (mask is not None
+                    and self.hard_edge_mask[edge_type] is not None):
+                loss = self._add_mask_regularization(
+                    loss, mask, self.hard_edge_mask[edge_type],
+                    self.coeffs['edge_size'], self.coeffs['edge_reduction'],
+                    self.coeffs['edge_ent'])
+
+        # Apply regularization for each node type
+        for node_type, mask in self.node_mask.items():
+            if (mask is not None
+                    and self.hard_node_mask[node_type] is not None):
+                loss = self._add_mask_regularization(
+                    loss, mask, self.hard_node_mask[node_type],
+                    self.coeffs['node_feat_size'],
+                    self.coeffs['node_feat_reduction'],
+                    self.coeffs['node_feat_ent'])
+
+        return loss
+
+    def _apply_homo_regularization(self, loss):
+        """Apply regularization for homogeneous graph."""
+        # Apply regularization for edge mask
+        if self.hard_edge_mask is not None:
+            assert self.edge_mask is not None
+            loss = self._add_mask_regularization(loss, self.edge_mask,
+                                                 self.hard_edge_mask,
+                                                 self.coeffs['edge_size'],
+                                                 self.coeffs['edge_reduction'],
+                                                 self.coeffs['edge_ent'])
+
+        # Apply regularization for node mask
+        if self.hard_node_mask is not None:
+            assert self.node_mask is not None
+            loss = self._add_mask_regularization(
+                loss, self.node_mask, self.hard_node_mask,
+                self.coeffs['node_feat_size'],
+                self.coeffs['node_feat_reduction'],
+                self.coeffs['node_feat_ent'])
+
+        return loss
+
+    def _add_mask_regularization(self, loss, mask, hard_mask, size_coeff,
+                                 reduction_name, ent_coeff):
+        """Add size and entropy regularization for a mask."""
+        m = mask[hard_mask].sigmoid()
+        reduce_fn = getattr(torch, reduction_name)
+        # Add size regularization
+        loss = loss + size_coeff * reduce_fn(m)
+        # Add entropy regularization
+        ent = -m * torch.log(m + self.coeffs['EPS']) - (
+            1 - m) * torch.log(1 - m + self.coeffs['EPS'])
+        loss = loss + ent_coeff * ent.mean()
+
+        return loss
+
+    def _clean_model(self, model):
+        clear_masks(model)
+        self.node_mask = self.hard_node_mask = None
+        self.edge_mask = self.hard_edge_mask = None
+
+
+class GNNExplainer_:
+    r"""Deprecated version for :class:`GNNExplainer`."""
+
+    coeffs = GNNExplainer.coeffs
+
+    conversion_node_mask_type = {
+        'feature': 'common_attributes',
+        'individual_feature': 'attributes',
+        'scalar': 'object',
+    }
+
+    conversion_return_type = {
+        'log_prob': 'log_probs',
+        'prob': 'probs',
+        'raw': 'raw',
+        'regression': 'raw',
+    }
+
+    def __init__(
+        self,
+        model: torch.nn.Module,
+        epochs: int = 100,
+        lr: float = 0.01,
+        return_type: str = 'log_prob',
+        feat_mask_type: str = 'feature',
+        allow_edge_mask: bool = True,
+        **kwargs,
+    ):
+        assert feat_mask_type in ['feature', 'individual_feature', 'scalar']
+
+        explainer_config = ExplainerConfig(
+            explanation_type='model',
+            node_mask_type=self.conversion_node_mask_type[feat_mask_type],
+            edge_mask_type=MaskType.object if allow_edge_mask else None,
+        )
+        model_config = ModelConfig(
+            mode='regression'
+            if return_type == 'regression' else 'multiclass_classification',
+            task_level=ModelTaskLevel.node,
+            return_type=self.conversion_return_type[return_type],
+        )
+
+        self.model = model
+        self._explainer = GNNExplainer(epochs=epochs, lr=lr, **kwargs)
+        self._explainer.connect(explainer_config, model_config)
+
+    @torch.no_grad()
+    def get_initial_prediction(self, *args, **kwargs) -> Tensor:
+
+        training = self.model.training
+        self.model.eval()
+
+        out = self.model(*args, **kwargs)
+        if (self._explainer.model_config.mode ==
+                ModelMode.multiclass_classification):
+            out = out.argmax(dim=-1)
+
+        self.model.train(training)
+
+        return out
+
+    def explain_graph(
+        self,
+        x: Tensor,
+        edge_index: Tensor,
+        **kwargs,
+    ) -> Tuple[Tensor, Tensor]:
+        self._explainer.model_config.task_level = ModelTaskLevel.graph
+
+        explanation = self._explainer(
+            self.model,
+            x,
+            edge_index,
+            target=self.get_initial_prediction(x, edge_index, **kwargs),
+            **kwargs,
+        )
+        return self._convert_output(explanation, edge_index)
+
+    def explain_node(
+        self,
+        node_idx: int,
+        x: Tensor,
+        edge_index: Tensor,
+        **kwargs,
+    ) -> Tuple[Tensor, Tensor]:
+        self._explainer.model_config.task_level = ModelTaskLevel.node
+        explanation = self._explainer(
+            self.model,
+            x,
+            edge_index,
+            target=self.get_initial_prediction(x, edge_index, **kwargs),
+            index=node_idx,
+            **kwargs,
+        )
+        return self._convert_output(explanation, edge_index, index=node_idx,
+                                    x=x)
+
+    def _convert_output(self, explanation, edge_index, index=None, x=None):
+        node_mask = explanation.get('node_mask')
+        edge_mask = explanation.get('edge_mask')
+
+        if node_mask is not None:
+            node_mask_type = self._explainer.explainer_config.node_mask_type
+            if node_mask_type in {MaskType.object, MaskType.common_attributes}:
+                node_mask = node_mask.view(-1)
+
+        if edge_mask is None:
+            if index is not None:
+                _, edge_mask = self._explainer._get_hard_masks(
+                    self.model, index, edge_index, num_nodes=x.size(0))
+                edge_mask = edge_mask.to(x.dtype)
+            else:
+                edge_mask = torch.ones(edge_index.size(1),
+                                       device=edge_index.device)
+
+        return node_mask, edge_mask