pyegeria 5.3.4.15__tar.gz → 5.3.4.16__tar.gz

{pyegeria-5.3.4.15 → pyegeria-5.3.4.16}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pyegeria
-Version: 5.3.4.15
+Version: 5.3.4.16
 Summary: A python client for Egeria
 License: Apache 2.0
 Keywords: egeria,metadata,governance

{pyegeria-5.3.4.15 → pyegeria-5.3.4.16}/pyegeria/mermaid_utilities.py

@@ -223,7 +223,7 @@ def construct_mermaid_html(mermaid_str: str) -> str:
     """
     title_label, guid, mermaid_code = parse_mermaid_code(mermaid_str)
 
-    graph_id = f"mermaid-graph-{guid}"
+    graph_id = f"mermaid-graph-{guid}-{str(uuid.uuid4())[:4]}"
     escaped_header = html.escape(title_label) if title_label else ""  # Sanitize the header safely
     escaped_mermaid_code = html.escape(mermaid_code)
     header_html = f"""
@@ -271,8 +271,9 @@ def construct_mermaid_html(mermaid_str: str) -> str:
     </style>
 
     <div id="{graph_id}-container" class="diagram-container">
+        {header_html}
         <div id="{graph_id}" class="mermaid">
-            {mermaid_code}
+            {escaped_mermaid_code}
         </div>
     </div>
 

pyegeria-5.3.4.16/pyegeria/test_m.html

@@ -0,0 +1,259 @@
+
+    <style>
+        .diagram-container {
+            position: relative;
+            width: 90%; /* Adjust container width */
+            height: 500px; /* Fixed height */
+            margin: 20px auto;
+            border: 1px solid #ccc;
+            overflow: hidden; /* Prevents content overflow */
+        }
+
+        .svg-pan-zoom-controls {
+            position: absolute;
+            top: 10px;
+            right: 10px;
+            display: flex;
+            flex-direction: column;
+            gap: 5px;
+            z-index: 10;
+        }
+
+        .svg-pan-zoom-controls button {
+            background-color: #007bff;
+            color: white;
+            border: none;
+            padding: 5px 10px;
+            border-radius: 3px;
+            cursor: pointer;
+            font-size: 14px;
+        }
+        .svg-pan-zoom-controls button:hover {
+            background-color: #0056b3;
+        }
+    </style>
+
+    <div id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-1569-container" class="diagram-container">
+        
+            <h3 id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-1569-heading" style="margin: 20px 0; font-size: 1.5em; text-align: center;">
+                Component for Solution Blueprint - Clinical Trial Management Solution Blueprint 
+            </h3>
+            <p id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-1569-subheading" style="margin: 0; padding: 5px; font-size: 1em; text-align: center; color: gray; flex: 0 0 auto;">
+                GUID: c4f8d707-7c85-4125-b5fd-c3257a2ef2ef
+            </p>
+            
+        <div id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-1569" class="mermaid">
+            flowchart TD
+%%{init: {&quot;flowchart&quot;: {&quot;htmlLabels&quot;: false}} }%%
+
+subgraph c4f8d707-7c85-4125-b5fd-c3257a2ef2ef [Components and Actors]
+fc2de77f-7320-48ea-8750-d434c6e870db@{ shape: text, label: &quot;*Description*
+**A description of how a clinical trial is managed in Coco Pharmaceuticals.**&quot;}
+37b8560d-84d4-434b-9b0d-105420fcc924@{ shape: subproc, label: &quot;*Solution Component*
+**Certify Hospital**&quot;}
+f37f3735-28a1-4e03-9ff5-3fe2f137f661@{ shape: trap-t, label: &quot;*Solution Actor Role*
+**Clinical Trial Manager**&quot;}
+f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Certifier&quot;|37b8560d-84d4-434b-9b0d-105420fcc924
+72a86eec-9734-4bc0-babb-4fec0aa7c9ff@{ shape: docs, label: &quot;*Solution Component*
+**Assemble Treatment Assessment Report**&quot;}
+48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5@{ shape: rect, label: &quot;*Solution Component*
+**Treatment Efficacy Evidence**&quot;}
+48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5--&gt;|&quot;Solution Linking Wire&quot;|72a86eec-9734-4bc0-babb-4fec0aa7c9ff
+f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Author&quot;|72a86eec-9734-4bc0-babb-4fec0aa7c9ff
+b5c8da4c-f925-4cf1-8294-e43cd2c1a584@{ shape: rect, label: &quot;*Solution Component*
+**Analyse Patient Data**&quot;}
+b5c8da4c-f925-4cf1-8294-e43cd2c1a584--&gt;|&quot;Solution Linking Wire&quot;|48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5
+7f5dca65-50b4-4103-9ac7-3a406a09047a@{ shape: subproc, label: &quot;*Solution Component*
+**Weekly Measurements Onboarding Pipeline**&quot;}
+07705e15-efff-4f80-8992-f04ac85e0ef1@{ shape: rect, label: &quot;*Solution Component*
+**Landing Folder Cataloguer**&quot;}
+07705e15-efff-4f80-8992-f04ac85e0ef1--&gt;|&quot;Solution Linking Wire&quot;|7f5dca65-50b4-4103-9ac7-3a406a09047a
+f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Steward&quot;|7f5dca65-50b4-4103-9ac7-3a406a09047a
+b0290339-c96c-4b05-904f-12fc98e54e14@{ shape: trap-t, label: &quot;*Solution Actor Role*
+**Certified Data Engineer**&quot;}
+b0290339-c96c-4b05-904f-12fc98e54e14--&gt;|&quot;Steward&quot;|7f5dca65-50b4-4103-9ac7-3a406a09047a
+d48f579f-76d3-4c49-b1b4-575f5645a9d0@{ shape: lin-cyl, label: &quot;*Solution Component*
+**Treatment Validation Sandbox**&quot;}
+26c07ca4-3b8e-484b-812b-36c1ace4b275@{ shape: rect, label: &quot;*Solution Component*
+**Populate Sandbox**&quot;}
+26c07ca4-3b8e-484b-812b-36c1ace4b275--&gt;|&quot;Solution Linking Wire&quot;|d48f579f-76d3-4c49-b1b4-575f5645a9d0
+ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec@{ shape: processes, label: &quot;*Solution Component*
+**Hospital Processes**&quot;}
+a8bd84ca-0aae-4534-b0e8-87e8659467a6@{ shape: trap-t, label: &quot;*Solution Actor Role*
+**Clinical Trial Participating Hospital Coordinator**&quot;}
+a8bd84ca-0aae-4534-b0e8-87e8659467a6--&gt;|&quot;Coordinator on behalf of hospital&quot;|ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec
+30adaab5-8870-47a8-8ae9-facbf84cb05a@{ shape: trap-t, label: &quot;*Solution Actor Role*
+**Clinical Trial Participating Hospital**&quot;}
+30adaab5-8870-47a8-8ae9-facbf84cb05a--&gt;|&quot;Owner&quot;|ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec
+d48f579f-76d3-4c49-b1b4-575f5645a9d0--&gt;|&quot;Solution Linking Wire&quot;|b5c8da4c-f925-4cf1-8294-e43cd2c1a584
+ece17806-836c-4756-b3a2-2d12dde215f6@{ shape: trap-t, label: &quot;*Solution Actor Role*
+**New Treatment Data Scientist**&quot;}
+ece17806-836c-4756-b3a2-2d12dde215f6--&gt;|&quot;Data Analyser&quot;|b5c8da4c-f925-4cf1-8294-e43cd2c1a584
+0c757e35-8a42-4d5f-b01b-c72a6cea65cc@{ shape: trap-t, label: &quot;*Solution Actor Role*
+**New Treatment Researcher.**&quot;}
+0c757e35-8a42-4d5f-b01b-c72a6cea65cc--&gt;|&quot;Results Interpreter&quot;|b5c8da4c-f925-4cf1-8294-e43cd2c1a584
+e9c2f911-ffcb-40c6-aeee-8c4d43811576@{ shape: subproc, label: &quot;*Solution Component*
+**Onboard Hospital**&quot;}
+b0290339-c96c-4b05-904f-12fc98e54e14--&gt;|&quot;Initiator&quot;|e9c2f911-ffcb-40c6-aeee-8c4d43811576
+849b0b42-f465-452b-813c-477d6398e082@{ shape: subproc, label: &quot;*Solution Component*
+**Set up clinical trial**&quot;}
+f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Initiator&quot;|849b0b42-f465-452b-813c-477d6398e082
+a5d4d638-6836-47e5-99d0-fdcde637e13f@{ shape: lin-cyl, label: &quot;*Solution Component*
+**Weekly Measurements Data Lake Folder**&quot;}
+7f5dca65-50b4-4103-9ac7-3a406a09047a--&gt;|&quot;Solution Linking Wire&quot;|a5d4d638-6836-47e5-99d0-fdcde637e13f
+0bf2547c-937c-41b6-814f-6284849271a1@{ shape: odd, label: &quot;*Solution Component*
+**Treatment Assessment Report Validation and Delivery**&quot;}
+72a86eec-9734-4bc0-babb-4fec0aa7c9ff--&gt;|&quot;Solution Linking Wire&quot;|0bf2547c-937c-41b6-814f-6284849271a1
+f6bc847b-868d-43cc-b767-41f5fe3e47d1@{ shape: trap-t, label: &quot;*Solution Actor Role*
+**Clinical Trial Sponsor**&quot;}
+f6bc847b-868d-43cc-b767-41f5fe3e47d1--&gt;|&quot;Reviewer&quot;|0bf2547c-937c-41b6-814f-6284849271a1
+a5d4d638-6836-47e5-99d0-fdcde637e13f--&gt;|&quot;Solution Linking Wire&quot;|26c07ca4-3b8e-484b-812b-36c1ace4b275
+fb32bef2-e79f-4893-b500-2e547f24d482@{ shape: subproc, label: &quot;*Solution Component*
+**Set up Data Lake Folder**&quot;}
+b0290339-c96c-4b05-904f-12fc98e54e14--&gt;|&quot;Initiator&quot;|fb32bef2-e79f-4893-b500-2e547f24d482
+1c150d6e-30cf-481c-9afb-3b06c9c9e78f@{ shape: lin-cyl, label: &quot;*Solution Component*
+**Hospital Landing Area Folder**&quot;}
+ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec--&gt;|&quot;Solution Linking Wire&quot;|1c150d6e-30cf-481c-9afb-3b06c9c9e78f
+1c150d6e-30cf-481c-9afb-3b06c9c9e78f--&gt;|&quot;Solution Linking Wire&quot;|07705e15-efff-4f80-8992-f04ac85e0ef1
+11c7c850-c67c-41cc-9423-d74db47cbf3a@{ shape: subproc, label: &quot;*Solution Component*
+**Nominate Hospital**&quot;}
+f37f3735-28a1-4e03-9ff5-3fe2f137f661--&gt;|&quot;Initiator&quot;|11c7c850-c67c-41cc-9423-d74db47cbf3a
+end
+style 48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style ece17806-836c-4756-b3a2-2d12dde215f6 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7
+style e9c2f911-ffcb-40c6-aeee-8c4d43811576 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style a5d4d638-6836-47e5-99d0-fdcde637e13f color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style 0bf2547c-937c-41b6-814f-6284849271a1 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style 30adaab5-8870-47a8-8ae9-facbf84cb05a color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7
+style b0290339-c96c-4b05-904f-12fc98e54e14 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7
+style 26c07ca4-3b8e-484b-812b-36c1ace4b275 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style 1c150d6e-30cf-481c-9afb-3b06c9c9e78f color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style 07705e15-efff-4f80-8992-f04ac85e0ef1 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style a8bd84ca-0aae-4534-b0e8-87e8659467a6 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7
+style 0c757e35-8a42-4d5f-b01b-c72a6cea65cc color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7
+style c4f8d707-7c85-4125-b5fd-c3257a2ef2ef color:#3079ab, fill:#b7c0c7, stroke:#3079ab
+style 37b8560d-84d4-434b-9b0d-105420fcc924 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style 11c7c850-c67c-41cc-9423-d74db47cbf3a color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style fc2de77f-7320-48ea-8750-d434c6e870db color:#000000, fill:#F9F7ED, stroke:#b7c0c7
+style 849b0b42-f465-452b-813c-477d6398e082 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style 7f5dca65-50b4-4103-9ac7-3a406a09047a color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style ee2bb773-e630-4cf9-bdf1-7c2dd64fe4ec color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style 72a86eec-9734-4bc0-babb-4fec0aa7c9ff color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style b5c8da4c-f925-4cf1-8294-e43cd2c1a584 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style f6bc847b-868d-43cc-b767-41f5fe3e47d1 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7
+style d48f579f-76d3-4c49-b1b4-575f5645a9d0 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+style f37f3735-28a1-4e03-9ff5-3fe2f137f661 color:#FFFFFF, fill:#AA00FF, stroke:#E1D5E7
+style fb32bef2-e79f-4893-b500-2e547f24d482 color:#FFFFFF, fill:#838cc7, stroke:#3079ab
+        </div>
+    </div>
+
+    <script>
+        (function() {
+            const graph_id = "mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-1569";
+            let panZoomInstance; // Reference for svg-pan-zoom instance
+
+            function initializeMermaid(graph_id) {
+                const container = document.getElementById(`${graph_id}-container`);
+                const diagram = document.getElementById(`${graph_id}`);
+
+                if (!container || !diagram) {
+                    console.error(`Container or diagram not found for ID "${graph_id}"`);
+                    return;
+                }
+
+                // Initialize Mermaid
+                mermaid.initialize({ startOnLoad: false });
+                mermaid.init(undefined, diagram);
+
+                // Set a small delay to allow Mermaid rendering to complete
+                setTimeout(() => {
+                    const svg = container.querySelector("svg");
+
+                    if (!svg) {
+                        console.error(`SVG not found for graph ID "${graph_id}"`);
+                        return;
+                    }
+
+                    // Force SVG to fit the container
+                    svg.setAttribute("width", "100%");
+                    svg.setAttribute("height", "100%");
+                    svg.setAttribute("preserveAspectRatio", "xMidYMid meet");
+                    svg.style.display = "block";
+
+                    if (!svg.hasAttribute("viewBox")) {
+                        const bbox = svg.getBBox();
+                        svg.setAttribute("viewBox", `0 0 ${bbox.width} ${bbox.height}`);
+                    }
+
+                    // Initialize Pan-Zoom
+                    panZoomInstance = svgPanZoom(svg, {
+                        zoomEnabled: true,
+                        controlIconsEnabled: false, // Custom controls
+                        fit: true,
+                        center: true,
+                        contain: true,
+                        minZoom: 0.5,
+                        maxZoom: 10
+                    });
+
+                    // Add controls
+                    const controlsContainer = document.createElement("div");
+                    controlsContainer.className = "svg-pan-zoom-controls";
+                    controlsContainer.innerHTML = `
+                        <button type="button" id="${graph_id}-zoom-in">+</button>
+                        <button type="button" id="${graph_id}-zoom-out">-</button>
+                        <button type="button" id="${graph_id}-reset">Reset</button>
+                    `;
+                    container.appendChild(controlsContainer);
+
+                    // Attach control event listeners
+                    document.getElementById(`${graph_id}-zoom-in`).addEventListener("click", () => {
+                        if (panZoomInstance) panZoomInstance.zoomIn();
+                    });
+                    document.getElementById(`${graph_id}-zoom-out`).addEventListener("click", () => {
+                        if (panZoomInstance) panZoomInstance.zoomOut();
+                    });
+                    document.getElementById(`${graph_id}-reset`).addEventListener("click", () => {
+                        if (panZoomInstance) {
+                            panZoomInstance.resetZoom();
+                            panZoomInstance.center();
+                        }
+                    });
+                }, 500); // Delay for Mermaid and SVG rendering
+            }
+
+            // Check if Mermaid and SVG-Pan-Zoom are loaded
+            const loadMermaid = typeof mermaid === "undefined";
+            const loadSvgPanZoom = typeof svgPanZoom === "undefined";
+
+            if (loadMermaid || loadSvgPanZoom) {
+                const promises = [];
+
+                // Load Mermaid.js if not already loaded
+                if (loadMermaid) {
+                    promises.push(new Promise((resolve) => {
+                        const script = document.createElement("script");
+                        script.src = "https://cdn.jsdelivr.net/npm/mermaid/dist/mermaid.min.js";
+                        script.onload = resolve;
+                        document.head.appendChild(script);
+                    }));
+                }
+
+                // Load SVG-Pan-Zoom if not already loaded
+                if (loadSvgPanZoom) {
+                    promises.push(new Promise((resolve) => {
+                        const script = document.createElement("script");
+                        script.src = "https://cdn.jsdelivr.net/npm/svg-pan-zoom@3.6.1/dist/svg-pan-zoom.min.js";
+                        script.onload = resolve;
+                        document.head.appendChild(script);
+                    }));
+                }
+
+                Promise.all(promises).then(() => initializeMermaid(graph_id));
+            } else {
+                initializeMermaid(graph_id);
+            }
+        })();
+    </script>
+
+        

{pyegeria-5.3.4.15 → pyegeria-5.3.4.16}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pyegeria"
-version = "5.3.4.15"
+version = "5.3.4.16"
 
 license = 'Apache 2.0'
 authors = ["Dan Wolfson <dan.wolfson@pdr-associates.com>"]

pyegeria-5.3.4.15/pyegeria/test_m.html

@@ -1,243 +0,0 @@
-
-        <style>
-        /* Style the diagram container */
-        .diagram-container {
-            position: relative;
-            width: 90%; /* Adjust container width */
-            height: 500px; /* Fixed height */
-            margin: 0 auto;
-            border: 1px solid #ccc;
-            overflow: hidden; /* Prevents content overflow */
-        }
-
-        /* Style custom zoom controls */
-        .svg-pan-zoom-controls {
-            position: absolute;
-            top: 10px;
-            right: 10px;
-            display: flex;
-            flex-direction: column;
-            gap: 5px;
-            z-index: 10; /* Ensures controls are above other elements */
-        }
-
-        .svg-pan-zoom-controls button {
-            background-color: #007bff;
-            color: white;
-            border: none;
-            padding: 5px 10px;
-            border-radius: 3px;
-            cursor: pointer;
-            font-size: 14px;
-        }
-        .svg-pan-zoom-controls button:hover {
-            background-color: #0056b3;
-        }
-    </style>
-
-    <div id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-container" class="diagram-container">
-        <!-- Title/Heading (optional; include as needed) -->
-        
-            <h3 id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-heading" style="margin: 20px 0; font-size: 1.5em; text-align: center;">
-                Component for Solution Blueprint - Clinical Trial Management Solution Blueprint 
-            </h3>
-            <p id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef-subheading" style="margin: 0; padding: 5px; font-size: 1em; text-align: center; color: gray; flex: 0 0 auto;">
-                GUID: c4f8d707-7c85-4125-b5fd-c3257a2ef2ef
-            </p>
-            
-        <!-- Mermaid rendering area -->
-        <div id="mermaid-graph-c4f8d707-7c85-4125-b5fd-c3257a2ef2ef" class="mermaid">
-            flowchart TD
-%%{init: {"flowchart": {"htmlLabels": false}} }%%
-
-subgraph c4f8d707-7c85-4125-b5fd-c3257a2ef2ef [Components and Actors]
-fc2de77f-7320-48ea-8750-d434c6e870db@{ shape: text, label: "*Description*
-**A description of how a clinical trial is managed in Coco Pharmaceuticals.**"}
-37b8560d-84d4-434b-9b0d-105420fcc924@{ shape: subproc, label: "*Solution Component*
-**Certify Hospital**"}
-f37f3735-28a1-4e03-9ff5-3fe2f137f661@{ shape: trap-t, label: "*Solution Actor Role*
-**Clinical Trial Manager**"}
-f37f3735-28a1-4e03-9ff5-3fe2f137f661-->|"Certifier"|37b8560d-84d4-434b-9b0d-105420fcc924
-72a86eec-9734-4bc0-babb-4fec0aa7c9ff@{ shape: docs, label: "*Solution Component*
-**Assemble Treatment Assessment Report**"}
-48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5@{ shape: rect, label: "*Solution Component*
-**Treatment Efficacy Evidence**"}
-48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5-->|"Solution Linking Wire"|72a86eec-9734-4bc0-babb-4fec0aa7c9ff
-f37f3735-28a1-4e03-9ff5-3fe2f137f661-->|"Author"|72a86eec-9734-4bc0-babb-4fec0aa7c9ff
-b5c8da4c-f925-4cf1-8294-e43cd2c1a584@{ shape: rect, label: "*Solution Component*
-**Analyse Patient Data**"}
-b5c8da4c-f925-4cf1-8294-e43cd2c1a584-->|"Solution Linking Wire"|48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5
-7f5dca65-50b4-4103-9ac7-3a406a09047a@{ shape: subproc, label: "*Solution Component*
-**Weekly Measurements Onboarding Pipeline**"}
-07705e15-efff-4f80-8992-f04ac85e0ef1@{ shape: rect, label: "*Solution Component*
-**Landing Folder Cataloguer**"}
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