pyeasyphd 0.3.0__tar.gz → 0.3.1__tar.gz

{pyeasyphd-0.3.0 → pyeasyphd-0.3.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyeasyphd
-Version: 0.3.0
+Version: 0.3.1
 Summary: pyeasyphd
 License: GPL-3.0-or-later
 License-File: LICENSE

{pyeasyphd-0.3.0 → pyeasyphd-0.3.1}/pyeasyphd/scripts/run_article_md.py

@@ -10,7 +10,7 @@ def run_article_md_daily_notes(
     bib_path_or_file: str,
     path_conferences_journals_json: str,
     options: dict
-):
+) -> None:
     """
     Run article markdown daily notes processing pipeline.
 
@@ -21,7 +21,13 @@ def run_article_md_daily_notes(
         bib_path_or_file (str): Path to bibliography file or directory
         path_conferences_journals_json (str): Path to conferences and journals JSON files directory
         options (dict): Additional options to override default settings
+
+    Returns:
+        None
     """
+    path_input_file = os.path.expandvars(os.path.expanduser(path_input_file))
+    path_output_file = os.path.expandvars(os.path.expanduser(path_output_file))
+
     # Initialize default options with detailed descriptions
     _options = {
         "full_json_c": os.path.expanduser(os.path.join(path_conferences_journals_json, "conferences.json")),
@@ -97,3 +103,5 @@ def run_article_md_daily_notes(
     })
 
     PyRunBibMdTex(path_output_file, ".md", "paper", _options).run_files(file_list, "", "current")
+
+    return None

pyeasyphd-0.3.1/pyeasyphd/scripts/run_article_tex.py

@@ -0,0 +1,119 @@
+import os
+
+from pyadvtools import GitAutoCommitter
+
+from pyeasyphd.tools import PyRunBibMdTex
+
+
+def run_article_tex_submit(
+    path_input_file: str,
+    input_file_names: list[str],
+    path_output_file: str,
+    bib_path_or_file: str,
+    path_conferences_journals_json: str,
+    options: dict
+) -> None:
+    """
+    Process academic article files (TeX, and bibliography) with automated Git version control.
+
+    This function handles the conversion and processing of academic article files including TeX documents, and
+    bibliography management with automatic Git commit and push capabilities.
+
+    Note: The raw figures and TeX source files must be located in the data/raw subdirectory of the input path.
+
+    Args:
+        path_input_file (str): Path to input files directory
+        input_file_names (list[str]): List of input file names
+        path_output_file (str): Path to output directory
+        bib_path_or_file (str): Path to bibliography file or directory
+        path_conferences_journals_json (str): Path to conferences and journals JSON files directory
+        options (dict): Additional options to override default settings
+
+    Returns:
+        None
+    """
+    path_input_file = os.path.expandvars(os.path.expanduser(path_input_file))
+    path_output_file = os.path.expandvars(os.path.expanduser(path_output_file))
+
+    # Initialize default options with detailed descriptions
+    _options = {
+        "full_json_c": os.path.expanduser(os.path.join(path_conferences_journals_json, "conferences.json")),
+        "full_json_j": os.path.expanduser(os.path.join(path_conferences_journals_json, "journals.json")),
+
+        # figure options
+        "includegraphics_figs_directory": os.path.join(path_input_file, "data", "raw"),
+        "shutil_includegraphics_figs": True,
+        "includegraphics_figs_in_relative_path": True,
+        "figure_folder_name": "figs",  # "" or "figs" or "main"
+
+        # bib options
+        "abbr_index_article_for_abbr": 1,  # 0, 1, 2
+        "abbr_index_inproceedings_for_abbr": 0,  # 0, 1, 2
+        "add_link_to_fields_for_abbr": None,  # None, or ["title", "journal", "booktitle"]
+        "maximum_authors_for_abbr": 0,  # 0, 1, 2, ...
+        "add_index_to_entries": False,
+        "bib_for_abbr_name": "abbr.bib",
+        "bib_for_zotero_name": "zotero.bib",
+        "bib_for_save_name": "save.bib",
+        "display_google_connected_scite": ["google", "connected", "scite"],
+
+        "bib_folder_name": "bibs",  # "" or "bib" or "bibs" or "main"
+        "delete_original_bib_in_output_folder": False,
+        "bib_path_or_file": os.path.expanduser(bib_path_or_file),
+
+        # tex options
+        "handly_preamble": True,
+        "final_output_main_tex_name": "main.tex",
+        "run_latex": False,
+        "delete_run_latex_cache": False,
+
+        "input_texs_directory": os.path.join(path_input_file, "data", "raw"),
+        "shutil_input_texs": True,
+        "input_texs_in_relative_path": True,
+        "tex_folder_name": "texs",  # "" or "tex" or "texs" or "main"
+        "delete_original_tex_in_output_folder": True,
+        "generate_tex": True,
+
+        # md options
+        "add_url_for_basic_dict": True,  # default is True
+        "add_anchor_for_basic_dict": False,  # default is False
+        "add_anchor_for_beauty_dict": False,  # default is False
+        "add_anchor_for_complex_dict": False,  # default is False
+
+        "final_output_main_md_name": "main.md",
+        "delete_temp_generate_md": True,
+        "add_reference_in_md": True,
+        "add_bib_in_md": False,
+        "replace_cite_to_fullcite_in_md": True,
+        "replace_by_basic_beauty_complex_in_md": "basic",
+        "display_basic_beauty_complex_references_in_md": "beauty",
+        "add_anchor_in_md": False,  # default is False
+
+        "md_folder_name": "mds",  # "" or "md" or "main"
+        "delete_original_md_in_output_folder": False,  # default is False
+
+        # html options
+        "generate_html": False,
+    }
+
+    # Update with user-provided options
+    _options.update(options)
+
+    committer = GitAutoCommitter(path_output_file)
+
+    if not committer.auto_check(remote="origin", branch="master"):
+        print("Remote != Local, please manually pull")
+
+    else:
+        # Create full file paths from input file names
+        file_list = [os.path.join(path_input_file, f) for f in input_file_names]
+
+        PyRunBibMdTex(path_output_file, ".tex", "paper", _options).run_files(file_list, "", "current")
+
+        if committer.has_changes():
+            # Auto commit
+            committer.auto_commit()
+            # Auto push
+            committer.auto_push(remote="origin", branch="master")
+
+    return None

{pyeasyphd-0.3.0 → pyeasyphd-0.3.1}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pyeasyphd"
-version = "0.3.0"
+version = "0.3.1"
 description = "pyeasyphd"
 license = "GPL-3.0-or-later"
 authors = ["NextAI <nextartifintell@gmail.com>"]