pyeasyphd 0.2.6__tar.gz → 0.2.10__tar.gz

{pyeasyphd-0.2.6 → pyeasyphd-0.2.10}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyeasyphd
-Version: 0.2.6
+Version: 0.2.10
 Summary: pyeasyphd
 License: GPL-3.0-or-later
 License-File: LICENSE
@@ -16,8 +16,8 @@ Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
 Classifier: Programming Language :: Python :: 3.14
 Classifier: Topic :: Software Development :: Libraries :: Python Modules
-Requires-Dist: pyadvtools (>=0.2.2,<0.3.0)
-Requires-Dist: pybibtexer (>=0.2.0,<0.3.0)
+Requires-Dist: pyadvtools (>=0.2.4,<0.3.0)
+Requires-Dist: pybibtexer (>=0.2.1,<0.3.0)
 Project-URL: Documentation, https://github.com/Easy-PhD/pyeasyphd
 Project-URL: Homepage, https://github.com/Easy-PhD/pyeasyphd
 Project-URL: Repository, https://github.com/Easy-PhD/pyeasyphd

{pyeasyphd-0.2.6 → pyeasyphd-0.2.10}/pyeasyphd/main/pandoc_md_to.py

@@ -31,6 +31,10 @@ class PandocMdTo(BasicInput):
         google_connected_paper_scite (bool): Whether to use Google connected paper scite. Defaults to True.
         display_one_line_reference_note (bool): Whether to display one line reference note. Defaults to False.
         cite_flag_in_tex (str): Citation flag in LaTeX. Defaults to "cite".
+        add_url_for_basic_dict (bool): Whether to add url for items in basic dict. Defualts to True.
+        add_anchor_for_basic_dict (bool): Whether to add anchor for items in basic dict. Defaults to False.
+        add_anchor_for_beauty_dict (bool): Whether to add anchor for items in beauty dict. Defaults to False.
+        add_anchor_for_complex_dict (bool): Whether to add anchor for items in complex dict. Defaults to False.
     """
 
     def __init__(self, options: dict) -> None:
@@ -52,6 +56,11 @@ class PandocMdTo(BasicInput):
         # tex
         self.cite_flag_in_tex: str = options.get("cite_flag_in_tex", "cite")
 
+        self.add_url_for_basic_dict: bool = options.get("add_url_for_basic_dict", True)
+        self.add_anchor_for_basic_dict: bool = options.get("add_anchor_for_basic_dict", False)
+        self.add_anchor_for_beauty_dict: bool = options.get("add_anchor_for_beauty_dict", False)
+        self.add_anchor_for_complex_dict: bool = options.get("add_anchor_for_complex_dict", False)
+
     def pandoc_md_to_md(
         self, path_bib: str, path_md_one: str, path_md_two: str, name_md_one: Optional[str], name_md_two: Optional[str]
     ) -> List[str]:
@@ -311,9 +320,18 @@ class PandocMdTo(BasicInput):
             if (not self.google_connected_paper_scite) and aa:
                 bb = [f"([www]({aa[0].strip()}))\n"]
 
-            a.extend(aa)
+            # add url
+            if self.add_url_for_basic_dict:
+                a.extend(aa)
+
             b.extend(bb)
 
+            # add anchor
+            if self.add_anchor_for_basic_dict:
+                a = [f'<a id="{k.lower()}"></a>'] + a
+            if self.add_anchor_for_beauty_dict or self.add_anchor_for_complex_dict:
+                b = [f'<a id="{k.lower()}"></a>'] + b
+
             if self.display_one_line_reference_note:
                 a = ["".join(a).replace("\n", " ").strip() + "\n"]
                 b = ["".join(b).replace("\n", " ").strip() + "\n"]

{pyeasyphd-0.2.6 → pyeasyphd-0.2.10}/pyeasyphd/main/python_run_md.py

@@ -13,6 +13,35 @@ from .basic_input import BasicInput
 from .pandoc_md_to import PandocMdTo
 
 
+def batch_convert_citations(text):
+    """
+    Process all citations in the text, including multiple citations in one bracket.
+
+    Example: [@ref1; @ref2] -> <sup>[@ref1](#ref1)</sup><sup>[@ref2](#ref2)</sup>
+    """
+    # Match all citation patterns within square brackets
+    pattern = r'\[([^]]+)\]'
+
+    def process_citation(match):
+        citations = match.group(1)
+        # Split multiple citations (support semicolon or comma separation)
+        citation_list = re.split(r'[;,]', citations)
+
+        result = []
+        for citation in citation_list:
+            citation = citation.strip()
+            if citation.startswith('@'):
+                cite_id = citation[1:]  # Remove the @ symbol
+                result.append(f'[{citation}](#{cite_id.lower()})')
+            else:
+                # Keep non-citation content in original format
+                result.append(f'[{citation}]')
+
+        return ''.join(result)
+
+    return re.sub(pattern, process_citation, text)
+
+
 class PythonRunMd(BasicInput):
     """Python markdown processing class.
 
@@ -26,6 +55,7 @@ class PythonRunMd(BasicInput):
         replace_cite_to_fullcite_in_md (bool): Whether to replace citations with full citations in markdown. Defaults to False.
         replace_by_basic_beauty_complex_in_md (str): Replace by basic, beauty, or complex format. Defaults to "beauty".
         display_basic_beauty_complex_references_in_md (str): Display basic, beauty, or complex references. Defaults to "beauty".
+        add_anchor_in_md (bool): Whether add anchor in markdown. Defaults to False.
     """
 
     def __init__(self, options: Dict[str, Any]) -> None:
@@ -46,6 +76,7 @@ class PythonRunMd(BasicInput):
         self.display_basic_beauty_complex_references_in_md: str = options.get(
             "display_basic_beauty_complex_references_in_md", "beauty"
         )
+        self.add_anchor_in_md: bool = options.get("add_anchor_in_md", False)
 
         # for md
         self._pandoc_md_to = PandocMdTo(self.options)
@@ -175,6 +206,9 @@ class PythonRunMd(BasicInput):
                         continue
 
                     content[i] = content[i].replace(mch.group(), mch.group(1) + "[" + mch.group(2) + "]")
+            # add anchor
+            if self.add_anchor_in_md:
+                content = [batch_convert_citations(line) for line in content]
             n2 = "2_generate" + ".md"
             write_list(content, n2, "w", path_temp)
 

{pyeasyphd-0.2.6 → pyeasyphd-0.2.10}/pyeasyphd/pyeasyphd.sublime-settings

@@ -9,6 +9,14 @@
     "display_one_line_reference_note": false,
     // "fullcite", "cite"
     "cite_flag_in_tex": "cite",
+    // true, false
+    "add_url_for_basic_dict": true,
+    // true, false
+    "add_anchor_for_basic_dict": false,
+    // true, false
+    "add_anchor_for_beauty_dict": false,
+    // true, false
+    "add_anchor_for_complex_dict": false,
 
     // for md file
     // pyeasyphd/main/python_run_md.py
@@ -26,6 +34,8 @@
     "replace_by_basic_beauty_complex_in_md": "beauty",
     // basic, beauty, complex
     "display_basic_beauty_complex_references_in_md": "beauty",
+    // true, false
+    "add_anchor_in_md": false,
 
     // for tex file
     // pyeasyphd/main/python_run_tex.py

{pyeasyphd-0.2.6 → pyeasyphd-0.2.10}/pyeasyphd/scripts/run_article_md.py

@@ -36,7 +36,7 @@ def run_article_md_daily_notes(
         # bib options
         "abbr_index_article_for_abbr": 1,  # 0, 1, 2
         "abbr_index_inproceedings_for_abbr": 2,  # 0, 1, 2
-        "add_link_to_fields_for_abbr": None,  # None, or ["title", "journal", "booktitle"]
+        "add_link_to_fields_for_abbr": ["title"],  # None, or ["title", "journal", "booktitle"]
         "maximum_authors_for_abbr": 0,  # 0, 1, 2, ...
         "add_index_to_entries": False,
         "bib_for_abbr_name": "abbr.bib",
@@ -62,6 +62,11 @@ def run_article_md_daily_notes(
         "generate_tex": False,
 
         # md options
+        "add_url_for_basic_dict": False,  # default is True
+        "add_anchor_for_basic_dict": False,  # default is False
+        "add_anchor_for_beauty_dict": True,  # default is False
+        "add_anchor_for_complex_dict": False,  # default is False
+
         "final_output_main_md_name": "main.md",
         "delete_temp_generate_md": True,
         "add_reference_in_md": True,
@@ -69,6 +74,7 @@ def run_article_md_daily_notes(
         "replace_cite_to_fullcite_in_md": True,
         "replace_by_basic_beauty_complex_in_md": "basic",
         "display_basic_beauty_complex_references_in_md": "beauty",
+        "add_anchor_in_md": True,  # default is False
 
         "md_folder_name": "mds",  # "" or "md" or "main"
         "delete_original_md_in_output_folder": True,  # False

{pyeasyphd-0.2.6 → pyeasyphd-0.2.10}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pyeasyphd"
-version = "0.2.6"
+version = "0.2.10"
 description = "pyeasyphd"
 license = "GPL-3.0-or-later"
 authors = ["NextAI <nextartifintell@gmail.com>"]
@@ -14,8 +14,8 @@ classifiers = ["Topic :: Software Development :: Libraries :: Python Modules"]
 
 [tool.poetry.dependencies]
 python = ">=3.12"
-pyadvtools = "^0.2.2"
-pybibtexer = "^0.2.0"
+pyadvtools = "^0.2.4"
+pybibtexer = "^0.2.1"
 
 [tool.poetry.group.dev.dependencies]
 mypy = "^1.18.1"