pychemstation 0.6.0__tar.gz → 0.6.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (53) hide show
  1. {pychemstation-0.6.0 → pychemstation-0.6.2}/PKG-INFO +1 -1
  2. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/device.py +2 -2
  3. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/injector.py +2 -2
  4. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/tables/table.py +1 -1
  5. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/hplc.py +2 -1
  6. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation.egg-info/PKG-INFO +1 -1
  7. {pychemstation-0.6.0 → pychemstation-0.6.2}/setup.py +1 -1
  8. {pychemstation-0.6.0 → pychemstation-0.6.2}/LICENSE +0 -0
  9. {pychemstation-0.6.0 → pychemstation-0.6.2}/README.md +0 -0
  10. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/__init__.py +0 -0
  11. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/analysis/__init__.py +0 -0
  12. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/analysis/base_spectrum.py +0 -0
  13. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/analysis/process_report.py +0 -0
  14. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/analysis/spec_utils.py +0 -0
  15. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/analysis/utils.py +0 -0
  16. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/__init__.py +0 -0
  17. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/__init__.py +0 -0
  18. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/comm.py +0 -0
  19. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/__init__.py +0 -0
  20. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/column.py +0 -0
  21. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/dad.py +0 -0
  22. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/pump.py +0 -0
  23. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/tables/__init__.py +0 -0
  24. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/tables/method.py +0 -0
  25. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/tables/ms.py +0 -0
  26. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/tables/sequence.py +0 -0
  27. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/generated/__init__.py +0 -0
  28. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/generated/dad_method.py +0 -0
  29. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/generated/pump_method.py +0 -0
  30. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/__init__.py +0 -0
  31. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/chromatogram.py +0 -0
  32. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/injector_types.py +0 -0
  33. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/macro.py +0 -0
  34. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/method_types.py +0 -0
  35. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/parsing.py +0 -0
  36. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/pump_types.py +0 -0
  37. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/sequence_types.py +0 -0
  38. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/table_types.py +0 -0
  39. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/utils/tray_types.py +0 -0
  40. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation.egg-info/SOURCES.txt +0 -0
  41. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation.egg-info/dependency_links.txt +0 -0
  42. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation.egg-info/requires.txt +0 -0
  43. {pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation.egg-info/top_level.txt +0 -0
  44. {pychemstation-0.6.0 → pychemstation-0.6.2}/pyproject.toml +0 -0
  45. {pychemstation-0.6.0 → pychemstation-0.6.2}/setup.cfg +0 -0
  46. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/__init__.py +0 -0
  47. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/constants.py +0 -0
  48. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/test_comb.py +0 -0
  49. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/test_comm.py +0 -0
  50. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/test_inj.py +0 -0
  51. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/test_method.py +0 -0
  52. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/test_proc_rep.py +0 -0
  53. {pychemstation-0.6.0 → pychemstation-0.6.2}/tests/test_sequence.py +0 -0
{pychemstation-0.6.0 → pychemstation-0.6.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: pychemstation
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- Version: 0.6.0
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+ Version: 0.6.2
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  Summary: Library to interact with Chemstation software, primarily used in Hein lab
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  Home-page: https://gitlab.com/heingroup/device-api/pychemstation
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  Author: Lucy Hao
{pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/device.py RENAMED
@@ -9,8 +9,8 @@ from ....utils.table_types import Table
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  class DeviceController(TableController, abc.ABC):
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- def __init__(self, controller: CommunicationController, table: Table):
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- super().__init__(controller, None, None, table)
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+ def __init__(self, controller: CommunicationController, table: Table, offline: bool):
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+ super().__init__(controller, None, None, table, offline)
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  @abc.abstractmethod
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  def get_row(self, row: int):
{pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/devices/injector.py RENAMED
@@ -7,8 +7,8 @@ from ....utils.table_types import Table, RegisterFlag
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  class InjectorController(DeviceController):
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- def __init__(self, controller: CommunicationController, table: Table):
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- super().__init__(controller, table)
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+ def __init__(self, controller: CommunicationController, table: Table, offline: bool):
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+ super().__init__(controller, table, offline)
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  def get_row(self, row: int) -> InjectorFunction:
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  def return_tray_loc() -> Tray:
{pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/controllers/tables/table.py RENAMED
@@ -305,5 +305,5 @@ class TableController(abc.ABC):
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  try:
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  spec.load_spectrum(data_path=data_path, channel=channel)
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  except FileNotFoundError:
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- self.spectra[channel] = None
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+ self.spectra[channel] = AgilentHPLCChromatogram(self.data_dir)
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  print(f"No data at channel: {channel}")
{pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation/control/hplc.py RENAMED
@@ -57,7 +57,8 @@ class HPLCController:
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  table=self.METHOD_TIMETABLE,
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  offline=offline,
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  injector_controller=InjectorController(controller=self.comm,
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- table=self.INJECTOR_TABLE))
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+ table=self.INJECTOR_TABLE,
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+ offline=offline))
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  self.sequence_controller = SequenceController(controller=self.comm,
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  src=sequence_dir,
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  data_dir=data_dir,
{pychemstation-0.6.0 → pychemstation-0.6.2}/pychemstation.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: pychemstation
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- Version: 0.6.0
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+ Version: 0.6.2
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  Summary: Library to interact with Chemstation software, primarily used in Hein lab
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  Home-page: https://gitlab.com/heingroup/device-api/pychemstation
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  Author: Lucy Hao
{pychemstation-0.6.0 → pychemstation-0.6.2}/setup.py RENAMED
@@ -5,7 +5,7 @@ with open("README.md", "r") as fh:
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  setuptools.setup(
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  name="pychemstation",
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- version="0.6.0",
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+ version="0.6.2",
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  author="Lucy Hao",
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  author_email="lhao03@student.ubc.ca",
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  description="Library to interact with Chemstation software, primarily used in Hein lab",
{pychemstation-0.6.0 → pychemstation-0.6.2}/LICENSE RENAMED
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{pychemstation-0.6.0 → pychemstation-0.6.2}/README.md RENAMED
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{pychemstation-0.6.0 → pychemstation-0.6.2}/setup.cfg RENAMED
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