pychemstation 0.5.0__tar.gz → 0.5.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (39) hide show
  1. {pychemstation-0.5.0 → pychemstation-0.5.1}/PKG-INFO +1 -3
  2. {pychemstation-0.5.0 → pychemstation-0.5.1}/README.md +0 -2
  3. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/control/table/sequence.py +3 -3
  4. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation.egg-info/PKG-INFO +1 -3
  5. {pychemstation-0.5.0 → pychemstation-0.5.1}/setup.py +1 -1
  6. {pychemstation-0.5.0 → pychemstation-0.5.1}/tests/test_sequence.py +1 -1
  7. {pychemstation-0.5.0 → pychemstation-0.5.1}/LICENSE +0 -0
  8. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/__init__.py +0 -0
  9. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/analysis/__init__.py +0 -0
  10. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/analysis/base_spectrum.py +0 -0
  11. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/analysis/spec_utils.py +0 -0
  12. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/analysis/utils.py +0 -0
  13. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/control/__init__.py +0 -0
  14. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/control/comm.py +0 -0
  15. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/control/hplc.py +0 -0
  16. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/control/table/__init__.py +0 -0
  17. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/control/table/method.py +0 -0
  18. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/control/table/table_controller.py +0 -0
  19. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/generated/__init__.py +0 -0
  20. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/generated/dad_method.py +0 -0
  21. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/generated/pump_method.py +0 -0
  22. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/__init__.py +0 -0
  23. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/chromatogram.py +0 -0
  24. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/constants.py +0 -0
  25. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/macro.py +0 -0
  26. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/method_types.py +0 -0
  27. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/parsing.py +0 -0
  28. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/sequence_types.py +0 -0
  29. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation/utils/table_types.py +0 -0
  30. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation.egg-info/SOURCES.txt +0 -0
  31. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation.egg-info/dependency_links.txt +0 -0
  32. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation.egg-info/requires.txt +0 -0
  33. {pychemstation-0.5.0 → pychemstation-0.5.1}/pychemstation.egg-info/top_level.txt +0 -0
  34. {pychemstation-0.5.0 → pychemstation-0.5.1}/pyproject.toml +0 -0
  35. {pychemstation-0.5.0 → pychemstation-0.5.1}/setup.cfg +0 -0
  36. {pychemstation-0.5.0 → pychemstation-0.5.1}/tests/__init__.py +0 -0
  37. {pychemstation-0.5.0 → pychemstation-0.5.1}/tests/constants.py +0 -0
  38. {pychemstation-0.5.0 → pychemstation-0.5.1}/tests/test_comm.py +0 -0
  39. {pychemstation-0.5.0 → pychemstation-0.5.1}/tests/test_method.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: pychemstation
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- Version: 0.5.0
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+ Version: 0.5.1
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  Summary: Library to interact with Chemstation software, primarily used in Hein lab
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  Home-page: https://gitlab.com/heingroup/pychemstation
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  Author: Lucy Hao
@@ -13,8 +13,6 @@ License-File: LICENSE
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  Requires-Dist: polling
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  Requires-Dist: seabreeze
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- from tests.test_chemstation_integration import SEQUENCE_DIR
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-
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  # Agilent HPLC Macro Control
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  ![PyPI - Downloads](https://img.shields.io/pypi/dm/pychemstation)
@@ -1,5 +1,3 @@
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- from tests.test_chemstation_integration import SEQUENCE_DIR
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-
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  # Agilent HPLC Macro Control
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  ![PyPI - Downloads](https://img.shields.io/pypi/dm/pychemstation)
@@ -141,10 +141,10 @@ class SequenceController(TableController):
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  :param sequence_table:
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  """
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  timestamp = time.strftime(SEQUENCE_TIME_FORMAT)
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- # self.send(Command.RUN_SEQUENCE_CMD.value)
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+ self.send(Command.RUN_SEQUENCE_CMD.value)
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  folder_name = f"{sequence_table.name} {timestamp}"
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  subdirs = [x[0] for x in os.walk(self.data_dir)]
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- # time.sleep(60)
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+ time.sleep(10)
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  potential_folders = sorted(list(filter(lambda d: folder_name in d, subdirs)))
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  parent_folder = potential_folders[0]
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  self.data_files.append(SequenceDataFiles(
@@ -157,7 +157,7 @@ class SequenceController(TableController):
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  return os.path.join(sequence_data_files.dir, sequence_data_files.child_dirs[-1])
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  def get_data(self) -> tuple[bool, Any]:
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- data_ready = True # self.data_ready()
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+ data_ready = self.data_ready()
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  sequence_data_files: SequenceDataFiles = self.data_files[-1]
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  spectra: list[dict[str, AgilentHPLCChromatogram]] = []
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  if data_ready:
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: pychemstation
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- Version: 0.5.0
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+ Version: 0.5.1
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  Summary: Library to interact with Chemstation software, primarily used in Hein lab
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  Home-page: https://gitlab.com/heingroup/pychemstation
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  Author: Lucy Hao
@@ -13,8 +13,6 @@ License-File: LICENSE
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  Requires-Dist: polling
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  Requires-Dist: seabreeze
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- from tests.test_chemstation_integration import SEQUENCE_DIR
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-
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  # Agilent HPLC Macro Control
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  ![PyPI - Downloads](https://img.shields.io/pypi/dm/pychemstation)
@@ -5,7 +5,7 @@ with open("README.md", "r") as fh:
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  setuptools.setup(
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  name="pychemstation",
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- version="0.5.0",
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+ version="0.5.1",
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  author="Lucy Hao",
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  author_email="lhao03@student.ubc.ca",
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  description="Library to interact with Chemstation software, primarily used in Hein lab",
@@ -96,7 +96,7 @@ class TestSequence(unittest.TestCase):
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  ),
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  ]
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  )
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- # self.hplc_controller.edit_sequence(seq_table)
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+ self.hplc_controller.edit_sequence(seq_table)
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  self.hplc_controller.run_sequence(seq_table)
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  chrom = self.hplc_controller.get_last_run_sequence_data()
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  self.assertTrue(len(chrom) == 2)
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