pyccapt 0.2.1__tar.gz → 0.2.3__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (313) hide show
  1. pyccapt-0.2.3/CHANGELOG.txt +28 -0
  2. {pyccapt-0.2.1 → pyccapt-0.2.3}/LICENSE +674 -674
  3. {pyccapt-0.2.1 → pyccapt-0.2.3}/MANIFEST.in +16 -16
  4. {pyccapt-0.2.1/pyccapt.egg-info → pyccapt-0.2.3}/PKG-INFO +458 -354
  5. pyccapt-0.2.3/README.md +321 -0
  6. pyccapt-0.2.3/pyccapt/__init__.py +16 -0
  7. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/CALIBRATION.md +87 -67
  8. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/DATA_STRUCTURE.md +79 -58
  9. {pyccapt-0.2.1/pyccapt/control/thorlabs_apt → pyccapt-0.2.3/pyccapt/calibration}/__init__.py +1 -1
  10. pyccapt-0.2.3/pyccapt/calibration/clustering/__init__.py +31 -0
  11. pyccapt-0.2.3/pyccapt/calibration/clustering/clustering.py +957 -0
  12. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/clustering/isosurface.py +256 -270
  13. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/__init__.py +14 -13
  14. pyccapt-0.2.3/pyccapt/calibration/core/adaptive_residual_calibration.py +981 -0
  15. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/background.py +10 -10
  16. pyccapt-0.2.3/pyccapt/calibration/core/calibration.py +1837 -0
  17. pyccapt-0.2.3/pyccapt/calibration/core/correction_models.py +315 -0
  18. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/diagnostics.py +137 -130
  19. pyccapt-0.2.3/pyccapt/calibration/core/event_filters.py +304 -0
  20. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/exceptions.py +13 -13
  21. pyccapt-0.2.3/pyccapt/calibration/core/flight_path_t0.py +482 -0
  22. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/gui_ion_select.py +198 -182
  23. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/hist_bin_optimizer.py +196 -190
  24. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/interactive_point_identification.py +132 -134
  25. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/ion_selection.py +753 -659
  26. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/logging_library.py +66 -66
  27. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/mc_plot.py +781 -569
  28. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/mc_plot_api.py +295 -230
  29. pyccapt-0.2.3/pyccapt/calibration/core/mc_plot_background_helpers.py +392 -0
  30. pyccapt-0.2.3/pyccapt/calibration/core/mc_plot_peak_helpers.py +1553 -0
  31. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/mc_plot_selector_helpers.py +52 -53
  32. pyccapt-0.2.3/pyccapt/calibration/core/ml_calibration.py +411 -0
  33. pyccapt-0.2.3/pyccapt/calibration/core/new_methods.py +935 -0
  34. pyccapt-0.2.3/pyccapt/calibration/core/parallel.py +235 -0
  35. pyccapt-0.2.3/pyccapt/calibration/core/peak_spectral_analysis.py +333 -0
  36. pyccapt-0.2.3/pyccapt/calibration/core/reference_optimizer.py +593 -0
  37. pyccapt-0.2.3/pyccapt/calibration/core/share_variables.py +437 -0
  38. pyccapt-0.2.3/pyccapt/calibration/core/spectrum_simulation.py +90 -0
  39. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/tools.py +520 -380
  40. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/validation.py +86 -72
  41. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/core/widgets.py +312 -297
  42. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/data_tools/__init__.py +1 -1
  43. pyccapt-0.2.3/pyccapt/calibration/data_tools/_raw_workflow_common.py +1210 -0
  44. pyccapt-0.2.3/pyccapt/calibration/data_tools/_raw_workflow_roentdek.py +484 -0
  45. pyccapt-0.2.3/pyccapt/calibration/data_tools/_raw_workflow_surface_concept.py +2378 -0
  46. pyccapt-0.2.3/pyccapt/calibration/data_tools/ato_tools.py +214 -0
  47. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/data_tools/data_loadcrop.py +1013 -679
  48. pyccapt-0.2.3/pyccapt/calibration/data_tools/data_tools.py +755 -0
  49. pyccapt-0.2.3/pyccapt/calibration/data_tools/dataset_path_qt.py +83 -0
  50. pyccapt-0.2.3/pyccapt/calibration/data_tools/file_dialog.py +61 -0
  51. pyccapt-0.2.3/pyccapt/calibration/data_tools/hdf5_schema.py +114 -0
  52. pyccapt-0.2.3/pyccapt/calibration/data_tools/lazy_io.py +654 -0
  53. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/data_tools/merge_range.py +55 -56
  54. pyccapt-0.2.3/pyccapt/calibration/data_tools/partial_hit_diagnostics.py +872 -0
  55. pyccapt-0.2.3/pyccapt/calibration/data_tools/partial_recovery.py +727 -0
  56. pyccapt-0.2.3/pyccapt/calibration/data_tools/plot_vline_draw.py +130 -0
  57. pyccapt-0.2.3/pyccapt/calibration/data_tools/raw_data_surface_concept.py +588 -0
  58. pyccapt-0.2.3/pyccapt/calibration/data_tools/raw_data_workflow.py +151 -0
  59. pyccapt-0.2.3/pyccapt/calibration/data_tools/run_dataset_path_qt.py +12 -0
  60. pyccapt-0.2.3/pyccapt/calibration/data_tools/run_directory_path_qt.py +11 -0
  61. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/data_tools/selectors_data.py +102 -90
  62. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/leap_tools/__init__.py +5 -1
  63. pyccapt-0.2.3/pyccapt/calibration/leap_tools/cameca_raw/README.md +20 -0
  64. pyccapt-0.2.3/pyccapt/calibration/leap_tools/cameca_raw/__init__.py +39 -0
  65. pyccapt-0.2.3/pyccapt/calibration/leap_tools/cameca_raw/_rhit_calibration.py +704 -0
  66. pyccapt-0.2.3/pyccapt/calibration/leap_tools/cameca_raw/rhit_extract.py +7 -0
  67. pyccapt-0.2.3/pyccapt/calibration/leap_tools/cameca_raw/rhit_tools.py +583 -0
  68. pyccapt-0.2.3/pyccapt/calibration/leap_tools/cameca_raw/str_tools.py +715 -0
  69. pyccapt-0.2.3/pyccapt/calibration/leap_tools/ccapt_tools.py +322 -0
  70. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/leap_tools/cloud_plotter.py +142 -138
  71. pyccapt-0.2.3/pyccapt/calibration/leap_tools/leap_tools.py +942 -0
  72. pyccapt-0.2.3/pyccapt/calibration/leap_tools/matlab_fig_range.py +480 -0
  73. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/mc/__init__.py +1 -1
  74. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/mc/mc_tools.py +107 -106
  75. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/mc/tof_tools.py +33 -32
  76. pyccapt-0.2.3/pyccapt/calibration/path_utils.py +84 -0
  77. pyccapt-0.2.3/pyccapt/calibration/reconstructions/__init__.py +5 -0
  78. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/reconstructions/crystal_helper.py +359 -356
  79. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/reconstructions/density_map.py +264 -233
  80. pyccapt-0.2.3/pyccapt/calibration/reconstructions/fft.py +125 -0
  81. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/reconstructions/io_utils.py +92 -81
  82. pyccapt-0.2.3/pyccapt/calibration/reconstructions/iso_surface.py +1280 -0
  83. pyccapt-0.2.3/pyccapt/calibration/reconstructions/plot_bounds.py +60 -0
  84. pyccapt-0.2.3/pyccapt/calibration/reconstructions/proxigram.py +314 -0
  85. pyccapt-0.2.3/pyccapt/calibration/reconstructions/rdf.py +156 -0
  86. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/reconstructions/reconstruction.py +1226 -1098
  87. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/reconstructions/rotation_tools.py +106 -108
  88. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/calibration/reconstructions/sdm.py +631 -513
  89. pyccapt-0.2.3/pyccapt/calibration/reconstructions/specimen_builder.py +173 -0
  90. pyccapt-0.2.3/pyccapt/calibration/reconstructions/tapsim_builder.py +1051 -0
  91. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/__init__.py +31 -0
  92. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/batch_cli.py +527 -0
  93. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/core.py +472 -0
  94. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/3000XHR_Leoben_21_14093_intersections.csv +193 -0
  95. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/3000XHR_Leoben_21_14093_reference.csv +161 -0
  96. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/3000XHR_Leoben_21_14093_triangles.csv +334 -0
  97. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/4000XHR_Erlangen_56_4833_intersections.csv +193 -0
  98. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/4000XHR_Erlangen_56_4833_reference.csv +161 -0
  99. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/4000XHR_Erlangen_56_4833_triangles.csv +334 -0
  100. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/5000XR_Leoben_5124_368_intersections.csv +193 -0
  101. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/5000XR_Leoben_5124_368_reference.csv +161 -0
  102. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/5000XR_Leoben_5124_368_triangles.csv +334 -0
  103. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/5000XR_Oxford_5083_23091_intersections.csv +193 -0
  104. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/5000XR_Oxford_5083_23091_reference.csv +161 -0
  105. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/5000XR_Oxford_5083_23091_triangles.csv +334 -0
  106. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/6000XR_Chalmers_6002_770_intersections.csv +193 -0
  107. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/6000XR_Chalmers_6002_770_reference.csv +161 -0
  108. pyccapt-0.2.3/pyccapt/calibration/reflectron_correction/data/presets/6000XR_Chalmers_6002_770_triangles.csv +335 -0
  109. pyccapt-0.2.3/pyccapt/config.toml +337 -0
  110. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/CONTROL.md +145 -93
  111. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/DATA_STRUCTURE.md +77 -67
  112. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/__init__.py +13 -13
  113. pyccapt-0.2.3/pyccapt/control/__main__.py +133 -0
  114. pyccapt-0.2.3/pyccapt/control/apt/__init__.py +1 -0
  115. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/apt/apt_exp_control.py +993 -715
  116. pyccapt-0.2.3/pyccapt/control/apt/apt_exp_control_func.py +237 -0
  117. pyccapt-0.2.3/pyccapt/control/apt/detector_models.py +25 -0
  118. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/apt/detector_runtime.py +80 -77
  119. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/apt/experiment_state.py +228 -212
  120. pyccapt-0.2.3/pyccapt/control/core/__init__.py +1 -0
  121. pyccapt-0.2.3/pyccapt/control/core/baking_loging.py +236 -0
  122. pyccapt-0.2.3/pyccapt/control/core/com_ports.py +22 -0
  123. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/core/control_data_tool.py +296 -296
  124. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/core/device_checks.py +247 -245
  125. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/core/experiment_statistics.py +114 -85
  126. pyccapt-0.2.3/pyccapt/control/core/hdf5_creator.py +453 -0
  127. pyccapt-0.2.3/pyccapt/control/core/live_calibration.py +895 -0
  128. pyccapt-0.2.3/pyccapt/control/core/loggi.py +466 -0
  129. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/core/read_files.py +130 -133
  130. pyccapt-0.2.3/pyccapt/control/core/recover_chunks_to_hdf5.py +509 -0
  131. pyccapt-0.2.3/pyccapt/control/core/runtime.py +255 -0
  132. pyccapt-0.2.3/pyccapt/control/core/share_variables.py +632 -0
  133. pyccapt-0.2.3/pyccapt/control/core/shared_ring_buffer.py +216 -0
  134. pyccapt-0.2.3/pyccapt/control/core/tof2mc_simple.py +32 -0
  135. pyccapt-0.2.3/pyccapt/control/devices/__init__.py +1 -0
  136. pyccapt-0.2.3/pyccapt/control/devices/camera.py +830 -0
  137. pyccapt-0.2.3/pyccapt/control/devices/edwards_tic.py +55 -0
  138. pyccapt-0.2.3/pyccapt/control/devices/email_send.py +310 -0
  139. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/devices/initialize_devices.py +661 -521
  140. pyccapt-0.2.3/pyccapt/control/devices/pfeiffer_gauges.py +252 -0
  141. pyccapt-0.2.3/pyccapt/control/devices/signal_generator.py +145 -0
  142. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/drs/README.md +3 -3
  143. pyccapt-0.2.3/pyccapt/control/drs/__init__.py +1 -0
  144. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/drs/drs.py +140 -107
  145. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/electrode.toml +17 -17
  146. pyccapt-0.2.3/pyccapt/control/gui/__init__.py +1 -0
  147. pyccapt-0.2.3/pyccapt/control/gui/gui_baking.py +516 -0
  148. pyccapt-0.2.3/pyccapt/control/gui/gui_cameras.py +1087 -0
  149. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/gui/gui_gates.py +514 -464
  150. pyccapt-0.2.3/pyccapt/control/gui/gui_laser_control.py +2247 -0
  151. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/gui/gui_main.py +2652 -1981
  152. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/gui/gui_pumps_vacuum.py +998 -1007
  153. pyccapt-0.2.3/pyccapt/control/gui/gui_stage_control.py +800 -0
  154. pyccapt-0.2.3/pyccapt/control/gui/gui_visualization.py +1938 -0
  155. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/gui/main_parameters.py +318 -320
  156. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/gui/process_coordinator.py +118 -102
  157. pyccapt-0.2.3/pyccapt/control/gui/tooltips.py +432 -0
  158. pyccapt-0.2.3/pyccapt/control/nkt_photonics/nktpbus_activate.py +49 -0
  159. pyccapt-0.2.3/pyccapt/control/nkt_photonics/nktpbus_switch.py +314 -0
  160. pyccapt-0.2.3/pyccapt/control/nkt_photonics/origamiClassCLI.py +404 -0
  161. pyccapt-0.2.3/pyccapt/control/smaract_mcs2/__init__.py +1 -0
  162. pyccapt-0.2.3/pyccapt/control/smaract_mcs2/mcs2_stage.py +436 -0
  163. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_roentdek/README.md +3 -3
  164. pyccapt-0.2.3/pyccapt/control/tdc_roentdek/__init__.py +1 -0
  165. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_roentdek/cobold_tool.py +204 -208
  166. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_roentdek/global.cfg +18 -18
  167. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_roentdek/source/global.cfg +18 -18
  168. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_roentdek/source/lmf2txt.exe +0 -0
  169. pyccapt-0.2.3/pyccapt/control/tdc_roentdek/tdc_roentdek.py +205 -0
  170. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_surface_concept/README.md +3 -3
  171. pyccapt-0.2.3/pyccapt/control/tdc_surface_concept/__init__.py +1 -0
  172. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_surface_concept/scTDC.py +1461 -1493
  173. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/tdc_surface_concept/tdc_gpx3.ini +168 -168
  174. pyccapt-0.2.3/pyccapt/control/tdc_surface_concept/tdc_surface_concept.py +619 -0
  175. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/thorlabs_apt/README.md +55 -55
  176. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/thorlabs_apt/_APTAPI.py +182 -183
  177. {pyccapt-0.2.1/pyccapt/control/usb_switch → pyccapt-0.2.3/pyccapt/control/thorlabs_apt}/__init__.py +1 -1
  178. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/thorlabs_apt/_error_codes.py +55 -55
  179. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/control/thorlabs_apt/core.py +1302 -1395
  180. pyccapt-0.2.3/pyccapt/control/thorlabs_apt/thorlab_motor.py +41 -0
  181. pyccapt-0.2.3/pyccapt/control/usb_switch/__init__.py +1 -0
  182. pyccapt-0.2.3/pyccapt/control/usb_switch/usb_switch.py +80 -0
  183. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/README.md +6 -6
  184. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_baking.ui +64 -64
  185. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_cameras.ui +620 -620
  186. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_gates.ui +271 -271
  187. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_laser_control.ui +839 -920
  188. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_laser_control_special.ui +288 -288
  189. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_main.ui +1719 -1733
  190. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_pumps_vacuum.ui +744 -744
  191. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_stage_control.ui +546 -386
  192. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt/files/PyQt6_UI/gui_visualization.ui +782 -639
  193. pyccapt-0.2.3/pyccapt/files/email_credentials.example.toml +48 -0
  194. {pyccapt-0.2.1 → pyccapt-0.2.3/pyccapt.egg-info}/PKG-INFO +458 -354
  195. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt.egg-info/SOURCES.txt +57 -1
  196. {pyccapt-0.2.1 → pyccapt-0.2.3}/pyccapt.egg-info/requires.txt +6 -0
  197. pyccapt-0.2.3/pyproject.toml +42 -0
  198. {pyccapt-0.2.1 → pyccapt-0.2.3}/setup.cfg +4 -4
  199. {pyccapt-0.2.1 → pyccapt-0.2.3}/setup.py +160 -146
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@@ -0,0 +1,28 @@
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+ Change Log
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+ ==========
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+
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+ 0.2.2 (04.05.2026)
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+ -------------------
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+ - Add GitHub Actions CI: tests (matrix on Linux/Windows × Py 3.10/3.11/3.12),
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+ ruff lint, Sphinx docs build, GHCR Docker image, tag-driven PyPI release.
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+ - Document the tag-driven release runbook in CONTRIBUTING.md, including PyPI
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+ Trusted Publishing setup and recovery from failed releases.
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+ - Fix `store_df_to_hdf` calling `DataFrame.to_hdf` with a positional `key`
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+ on modern pandas (TypeError: takes 2 positional arguments but 3 given).
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+ - Make `_build_peak_template` skip-not-fail when a peak window has fewer
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+ than 25 ions, aligning the threshold with `_split_reference_peaks` so
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+ adaptive residual calibration degrades gracefully on sparse peaks.
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+ - Mock optional control-extra deps (PyQt6, pyqtgraph, pyserial, opencv,
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+ pyvisa) in docs/conf.py so the docs build runs in the calibration-only
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+ CI environment.
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+ - README badges: distinguish the docs CI badge (now "docs build") from the
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+ Read the Docs link badge.
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+ - Loosen the synthetic-fixture spread tolerance in
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+ test_adaptive_residual_calibration_reduces_windowed_peak_drift to 2x to
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+ match the metric's noise floor on small datasets.
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+
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+ 0.0.1 (23.03.2022)
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+ -------------------
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+ - First Release
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+
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+