pybiolib 1.2.686__tar.gz → 1.2.698__tar.gz

{pybiolib-1.2.686 → pybiolib-1.2.698}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pybiolib
-Version: 1.2.686
+Version: 1.2.698
 Summary: BioLib Python Client
 License: MIT
 Keywords: biolib

{pybiolib-1.2.686 → pybiolib-1.2.698}/biolib/__init__.py

@@ -30,13 +30,15 @@ def call_cli() -> None:
     biolib.cli.cli()
 
 
-def load(uri: str) -> _BioLibApp:
+def load(uri: str, suppress_version_warning: bool = False) -> _BioLibApp:
     r"""Load a BioLib application by its URI or website URL.
 
     Args:
         uri (str): The URI or website URL of the application to load. Can be either:
             - App URI (e.g., 'biolib/myapp:1.0.0')
             - Website URL (e.g., 'https://biolib.com/biolib/myapp/')
+        suppress_version_warning (bool): If True, don't print a warning when no version is specified.
+            Defaults to False.
 
     Returns:
         BioLibApp: The loaded application object
@@ -49,7 +51,7 @@ def load(uri: str) -> _BioLibApp:
         >>> app = biolib.load('https://biolib.com/biolib/myapp/')
         >>> result = app.cli('--help')
     """
-    return _BioLibApp(uri)
+    return _BioLibApp(uri, suppress_version_warning=suppress_version_warning)
 
 
 def search(

{pybiolib-1.2.686 → pybiolib-1.2.698}/biolib/_session/session.py

@@ -17,13 +17,15 @@ class Session:
             )
         )
 
-    def load(self, uri: str) -> BioLibApp:
+    def load(self, uri: str, suppress_version_warning: bool = False) -> BioLibApp:
         r"""Load a BioLib application by its URI or website URL.
 
         Args:
             uri (str): The URI or website URL of the application to load. Can be either:
                 - App URI (e.g., 'biolib/myapp:1.0.0')
                 - Website URL (e.g., 'https://biolib.com/biolib/myapp/')
+            suppress_version_warning (bool): If True, don't print a warning when no version is specified.
+                Defaults to False.
 
         Returns:
             BioLibApp: The loaded application object
@@ -36,4 +38,4 @@ class Session:
             >>> app = biolib.load('https://biolib.com/biolib/myapp/')
             >>> result = app.cli('--help')
         """
-        return BioLibApp(uri=uri, _api_client=self._api)
+        return BioLibApp(uri=uri, _api_client=self._api, suppress_version_warning=suppress_version_warning)

{pybiolib-1.2.686 → pybiolib-1.2.698}/biolib/app/app.py

@@ -19,10 +19,11 @@ from biolib.experiments.experiment import Experiment
 from biolib.jobs import Job
 from biolib.typing_utils import Dict, Optional
 from biolib.utils.app_uri import parse_app_uri
+from biolib._runtime.runtime import Runtime
 
 
 class BioLibApp:
-    def __init__(self, uri: str, _api_client: Optional[ApiClient] = None):
+    def __init__(self, uri: str, _api_client: Optional[ApiClient] = None, suppress_version_warning: bool = False):
         self._api_client: Optional[ApiClient] = _api_client
 
         app_response = BiolibAppApi.get_by_uri(uri=uri, api_client=self._api_client)
@@ -30,6 +31,16 @@ class BioLibApp:
         self._app_uri = app_response['app_uri']
         self._app_version: AppVersion = app_response['app_version']
 
+        if not suppress_version_warning:
+            parsed_uri = parse_app_uri(uri)
+            if parsed_uri['version'] is None:
+                if Runtime.check_is_environment_biolib_app():
+                    logger.warning(
+                        f"No version specified in URI '{uri}'. This will use the default version, "
+                        f"which may change behaviour over time. Consider locking down the exact version, "
+                        f"e.g. '{uri}:1.2.3'"
+                    )
+
         logger.info(f'Loaded project {self._app_uri}')
 
     def __str__(self) -> str:

{pybiolib-1.2.686 → pybiolib-1.2.698}/biolib/cli/init.py

@@ -15,12 +15,17 @@ def init() -> None:
     if os.path.exists(config_file_path):
         print(f'The file "{config_file_path}" already exists', file=sys.stderr)
         exit(1)
-    else:
+
+    try:
+        project_name = input('Enter a name for your project: ')
+
         os.makedirs(f'{cwd}/.biolib', exist_ok=True)
         with open(config_file_path, 'w') as config_file:
             config_file.write(templates.example_app.CONFIG_YML)
 
-    if not os.path.exists(readme_path):
-        with open(readme_path, 'w') as readme_file:
-            project_name = input('Enter a name for your project: ')
-            readme_file.write(f'# {project_name}\n')
+        if not os.path.exists(readme_path):
+            with open(readme_path, 'w') as readme_file:
+                readme_file.write(f'# {project_name}\n')
+    except KeyboardInterrupt:
+        print('\nInit command cancelled.', file=sys.stderr)
+        exit(1)

{pybiolib-1.2.686 → pybiolib-1.2.698}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pybiolib"
-version = "1.2.686"
+version = "1.2.698"
 description = "BioLib Python Client"
 readme = "PYPI_README.md"
 license = "MIT"