pybiolib 1.2.342.dev1__tar.gz → 1.2.347__tar.gz

{pybiolib-1.2.342.dev1 → pybiolib-1.2.347}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pybiolib
-Version: 1.2.342.dev1
+Version: 1.2.347
 Summary: BioLib Python Client
 License: MIT
 Keywords: biolib

{pybiolib-1.2.342.dev1 → pybiolib-1.2.347}/biolib/_internal/http_client.py

@@ -13,7 +13,7 @@ import urllib.request
 from biolib.biolib_logging import logger_no_user_data
 from biolib.typing_utils import Dict, Literal, Optional, Union, cast
 
-_HttpMethod = Literal['GET', 'POST', 'PATCH', 'PUT']
+_HttpMethod = Literal['GET', 'POST', 'PATCH', 'PUT', 'DELETE']
 
 
 def _create_ssl_context():

{pybiolib-1.2.342.dev1 → pybiolib-1.2.347}/biolib/api/client.py

@@ -70,6 +70,19 @@ class ApiClient(HttpClient):
             url=self._get_absolute_url(path=path, query_params=params),
         )
 
+    def delete(
+        self,
+        path: str,
+        headers: OptionalHeaders = None,
+        retries: int = 0,
+    ) -> HttpResponse:
+        return self.request(
+            headers=self._get_headers(opt_headers=headers, authenticate=True),
+            method='DELETE',
+            retries=retries,
+            url=self._get_absolute_url(path=path, query_params=None),
+        )
+
     @staticmethod
     def _get_headers(opt_headers: OptionalHeaders, authenticate: bool) -> Dict[str, str]:
         # Only keep header keys with a value

{pybiolib-1.2.342.dev1 → pybiolib-1.2.347}/biolib/experiments/experiment.py

@@ -90,9 +90,30 @@ class Experiment:
 
         print(f'All jobs of experiment {self.name} have finished')
 
-    def add_job(self, job_id: str) -> None:
+    def add_job(self, job: Optional[Union[Job, str]] = None, job_id: Optional[str] = None) -> None:
+        if job_id is not None:
+            print(
+                'WARNING: job_id argument is deprecated and may be removed in a future release.'
+                'Please use job argument instead.'
+            )
+        elif isinstance(job, Job):
+            job_id = job.id
+        elif isinstance(job, str):
+            job_id = job
+        elif job is None and job_id is None:
+            raise BioLibError('A job ID or job object must be provided to add job')
         api.client.patch(path=f'/jobs/{job_id}/', data={'experiment_uuid': self.uuid})
 
+    def remove_job(self, job: Union[Job, str]) -> None:
+        if isinstance(job, Job):
+            job_id = job.id
+        elif isinstance(job, str):
+            job_id = job
+        else:
+            raise BioLibError('A job ID or job object must be provided to remove job')
+
+        api.client.delete(path=f'/experiments/{self.uuid}/jobs/{job_id}/')
+
     def mount_files(self, mount_path: str) -> None:
         try:
             # Only attempt to import FUSE dependencies when strictly necessary

{pybiolib-1.2.342.dev1 → pybiolib-1.2.347}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pybiolib"
-version = "1.2.342.dev1"
+version = "1.2.347"
 description = "BioLib Python Client"
 readme = "PYPI_README.md"
 license = "MIT"