pybiolib 1.2.257__tar.gz → 1.2.261__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {pybiolib-1.2.257 → pybiolib-1.2.261}/PKG-INFO +1 -1
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/http_client.py +9 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/pyproject.toml +1 -1
- {pybiolib-1.2.257 → pybiolib-1.2.261}/LICENSE +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/PYPI_README.md +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_data_record/data_record.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/data_record/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/data_record/data_record.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/data_record/push_data.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/data_record/remote_storage_endpoint.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/file_utils.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/fuse_mount/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/fuse_mount/experiment_fuse_mount.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/lfs/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/lfs/cache.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/libs/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/libs/fusepy/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/push_application.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/runtime.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/app.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/data_record.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/experiment.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/file_node.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/resource.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/resource_version.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/types/typing.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/utils/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/utils/multinode.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_runtime/runtime.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/api/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/api/client.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/app/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/app/app.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/app/search_apps.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/api_client.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/app_types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/auth.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/biolib_app_api.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/biolib_job_api.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/common_types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/job_types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/lfs_types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_api_client/user_state.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/base_bbf_package.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/file_in_container.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/module_input.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/module_output_v2.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/remote_endpoints.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/remote_stream_seeker.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/saved_job.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/stdout_and_stderr.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/system_exception.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/system_status_update.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_binary_format/utils.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_docker_client/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_download_container.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_errors.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/biolib_logging.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/auth.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/data_record.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/download_container.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/init.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/lfs.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/push.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/run.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/runtime.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/cli/start.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/.gitignore +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/cloud_utils/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/cloud_utils/cloud_utils.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/cache_state.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/cache_types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/docker_image_cache.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/docker_executor.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/docker_types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/tars/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/job_legacy_input_wait_timeout_thread.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/job_max_runtime_timer_thread.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/job_storage.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/job_worker.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/large_file_system.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/mappings.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/utilization_reporter_thread.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/utils.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/remote_host_proxy.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/socker_listener_thread.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/socket_sender_thread.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/utils.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/webserver/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/webserver/gunicorn_flask_application.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/webserver/webserver.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/webserver/webserver_types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/webserver/webserver_utils.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/webserver/worker_thread.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/experiments/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/experiments/experiment.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/jobs/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/jobs/job.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/jobs/job_result.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/jobs/types.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/runtime/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/sdk/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/tables.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/templates/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/templates/example_app.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/typing_utils.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/user/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/user/sign_in.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/utils/__init__.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/utils/app_uri.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/utils/cache_state.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/utils/multipart_uploader.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/utils/seq_util.py +0 -0
- {pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/utils/zip/remote_zip.py +0 -0
@@ -79,6 +79,7 @@ class HttpClient:
|
|
79
79
|
timeout_in_seconds: Optional[int] = None,
|
80
80
|
response_path: Optional[str] = None,
|
81
81
|
retry_on_http_500: Optional[bool] = False,
|
82
|
+
max_content_length_in_bytes: Optional[int] = None,
|
82
83
|
) -> HttpResponse:
|
83
84
|
if not HttpClient.ssl_context:
|
84
85
|
HttpClient.ssl_context = _create_ssl_context()
|
@@ -107,6 +108,14 @@ class HttpClient:
|
|
107
108
|
context=HttpClient.ssl_context,
|
108
109
|
timeout=timeout_in_seconds,
|
109
110
|
) as response:
|
111
|
+
if max_content_length_in_bytes:
|
112
|
+
content_length = response.getheader('Content-Length')
|
113
|
+
if not content_length:
|
114
|
+
raise ValueError('No Content-Length in response headers')
|
115
|
+
|
116
|
+
if int(content_length) > max_content_length_in_bytes:
|
117
|
+
raise ValueError(f'Content-Length exceeds {max_content_length_in_bytes} bytes')
|
118
|
+
|
110
119
|
return HttpResponse(response, response_path)
|
111
120
|
|
112
121
|
except urllib.error.HTTPError as error:
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
{pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/_internal/data_record/remote_storage_endpoint.py
RENAMED
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
{pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/docker_executor.py
RENAMED
File without changes
|
{pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/docker_types.py
RENAMED
File without changes
|
{pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/executors/tars/__init__.py
RENAMED
File without changes
|
File without changes
|
File without changes
|
{pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/job_max_runtime_timer_thread.py
RENAMED
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
{pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/job_worker/utilization_reporter_thread.py
RENAMED
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
{pybiolib-1.2.257 → pybiolib-1.2.261}/biolib/compute_node/webserver/gunicorn_flask_application.py
RENAMED
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|