pybiolib 1.1.1984__tar.gz → 1.1.1988__tar.gz

{pybiolib-1.1.1984 → pybiolib-1.1.1988}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: pybiolib
-Version: 1.1.1984
+Version: 1.1.1988
 Summary: BioLib Python Client
 Home-page: https://github.com/biolib
 License: MIT

{pybiolib-1.1.1984 → pybiolib-1.1.1988}/biolib/_internal/fuse_mount/experiment_fuse_mount.py

@@ -21,6 +21,9 @@ class _AttributeDict(TypedDict):
     st_uid: int
 
 
+_SUCCESS_CODE = 0
+
+
 class ExperimentFuseMount(Operations):
     def __init__(self, experiment):
         self._experiment = experiment
@@ -29,10 +32,10 @@ class ExperimentFuseMount(Operations):
         self._mounted_at_epoch_seconds: int = int(time())
 
     @staticmethod
-    def mount(experiment, path: str) -> None:
+    def mount_experiment(experiment, mount_path: str) -> None:
         FUSE(
             operations=ExperimentFuseMount(experiment),
-            mountpoint=path,
+            mountpoint=mount_path,
             nothreads=True,
             foreground=True,
             allow_other=False,
@@ -97,7 +100,7 @@ class ExperimentFuseMount(Operations):
             # file not found
             raise FuseOSError(errno.ENOENT) from None
 
-        return 0  # return dummy file handle
+        return 1234  # dummy file handle
 
     def read(self, path: str, size: int, offset: int, fh: int) -> bytes:
         job, path_in_job = self._parse_path(path)
@@ -108,6 +111,15 @@ class ExperimentFuseMount(Operations):
 
         return file.get_data(start=offset, length=size)
 
+    def release(self, path: str, fh: int) -> int:
+        return _SUCCESS_CODE
+
+    def releasedir(self, path: str, fh: int) -> int:
+        return _SUCCESS_CODE
+
+    def flush(self, path: str, fh: int) -> int:
+        return _SUCCESS_CODE
+
     @staticmethod
     def _get_directory_attributes(timestamp_epoch_seconds: int) -> _AttributeDict:
         return _AttributeDict(
@@ -193,11 +205,5 @@ class ExperimentFuseMount(Operations):
     def truncate(self, path, length, fh=None):
         raise FuseOSError(errno.EACCES)
 
-    def flush(self, path, fh):
-        raise FuseOSError(errno.EACCES)
-
-    def release(self, path, fh):
-        raise FuseOSError(errno.EACCES)
-
     def fsync(self, path, datasync, fh):
         raise FuseOSError(errno.EACCES)

{pybiolib-1.1.1984 → pybiolib-1.1.1988}/biolib/experiments/experiment.py

@@ -73,7 +73,7 @@ class Experiment:
     def add_job(self, job_id: str) -> None:
         api.client.patch(path=f'/jobs/{job_id}/', data={'experiment_uuid': self.uuid})
 
-    def mount_files(self, path: str) -> None:
+    def mount_files(self, mount_path: str) -> None:
         try:
             # Only attempt to import FUSE dependencies when strictly necessary
             from biolib._internal.fuse_mount import (  # pylint: disable=import-outside-toplevel
@@ -84,7 +84,7 @@ class Experiment:
                 'Failed to import FUSE mounting utils. Please ensure FUSE is installed on your system.'
             ) from error
 
-        _ExperimentFuseMount.mount(experiment=self, path=path)
+        _ExperimentFuseMount.mount_experiment(experiment=self, mount_path=mount_path)
 
     def export_job_list(self, export_format='dicts'):
         valid_formats = ('dicts', 'dataframe')

{pybiolib-1.1.1984 → pybiolib-1.1.1988}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pybiolib"
-version = "1.1.1984"
+version = "1.1.1988"
 description = "BioLib Python Client"
 readme = "README.md"
 license = "MIT"