pybiolib 1.1.1917__tar.gz → 1.1.1921__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (109) hide show
  1. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/PKG-INFO +1 -1
  2. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/data_record/data_record.py +5 -0
  3. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/sdk/__init__.py +3 -3
  4. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/pyproject.toml +1 -1
  5. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/LICENSE +0 -0
  6. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/README.md +0 -0
  7. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/__init__.py +0 -0
  8. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/__init__.py +0 -0
  9. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/data_record/__init__.py +0 -0
  10. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/data_record/remote_storage_endpoint.py +0 -0
  11. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/http_client.py +0 -0
  12. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/push_application.py +0 -0
  13. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/runtime.py +0 -0
  14. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/_internal/utils/__init__.py +0 -0
  15. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/api/__init__.py +0 -0
  16. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/api/client.py +0 -0
  17. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/app/__init__.py +0 -0
  18. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/app/app.py +0 -0
  19. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/app/search_apps.py +0 -0
  20. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/__init__.py +0 -0
  21. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/api_client.py +0 -0
  22. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/app_types.py +0 -0
  23. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/auth.py +0 -0
  24. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/biolib_app_api.py +0 -0
  25. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/biolib_job_api.py +0 -0
  26. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/common_types.py +0 -0
  27. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/job_types.py +0 -0
  28. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/lfs_types.py +0 -0
  29. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_api_client/user_state.py +0 -0
  30. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/__init__.py +0 -0
  31. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/base_bbf_package.py +0 -0
  32. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/file_in_container.py +0 -0
  33. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/module_input.py +0 -0
  34. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/module_output_v2.py +0 -0
  35. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/remote_endpoints.py +0 -0
  36. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/remote_stream_seeker.py +0 -0
  37. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/saved_job.py +0 -0
  38. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/stdout_and_stderr.py +0 -0
  39. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/system_exception.py +0 -0
  40. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/system_status_update.py +0 -0
  41. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_binary_format/utils.py +0 -0
  42. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_docker_client/__init__.py +0 -0
  43. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_download_container.py +0 -0
  44. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_errors.py +0 -0
  45. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/biolib_logging.py +0 -0
  46. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/__init__.py +0 -0
  47. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/auth.py +0 -0
  48. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/data_record.py +0 -0
  49. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/download_container.py +0 -0
  50. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/init.py +0 -0
  51. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/lfs.py +0 -0
  52. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/push.py +0 -0
  53. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/run.py +0 -0
  54. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/runtime.py +0 -0
  55. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/cli/start.py +0 -0
  56. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/.gitignore +0 -0
  57. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/__init__.py +0 -0
  58. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/cloud_utils/__init__.py +0 -0
  59. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/cloud_utils/cloud_utils.py +0 -0
  60. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/__init__.py +0 -0
  61. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/cache_state.py +0 -0
  62. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/cache_types.py +0 -0
  63. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/docker_image_cache.py +0 -0
  64. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/executors/__init__.py +0 -0
  65. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/executors/docker_executor.py +0 -0
  66. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/executors/docker_types.py +0 -0
  67. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/executors/tars/__init__.py +0 -0
  68. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/executors/types.py +0 -0
  69. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/job_legacy_input_wait_timeout_thread.py +0 -0
  70. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/job_max_runtime_timer_thread.py +0 -0
  71. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/job_storage.py +0 -0
  72. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/job_worker.py +0 -0
  73. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/large_file_system.py +0 -0
  74. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/mappings.py +0 -0
  75. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/utilization_reporter_thread.py +0 -0
  76. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/job_worker/utils.py +0 -0
  77. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/remote_host_proxy.py +0 -0
  78. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/socker_listener_thread.py +0 -0
  79. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/socket_sender_thread.py +0 -0
  80. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/utils.py +0 -0
  81. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/webserver/__init__.py +0 -0
  82. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/webserver/gunicorn_flask_application.py +0 -0
  83. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/webserver/webserver.py +0 -0
  84. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/webserver/webserver_types.py +0 -0
  85. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/webserver/webserver_utils.py +0 -0
  86. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/compute_node/webserver/worker_thread.py +0 -0
  87. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/experiments/__init__.py +0 -0
  88. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/experiments/experiment.py +0 -0
  89. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/experiments/types.py +0 -0
  90. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/jobs/__init__.py +0 -0
  91. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/jobs/job.py +0 -0
  92. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/jobs/job_result.py +0 -0
  93. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/jobs/types.py +0 -0
  94. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/lfs/__init__.py +0 -0
  95. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/lfs/cache.py +0 -0
  96. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/lfs/utils.py +0 -0
  97. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/runtime/__init__.py +0 -0
  98. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/tables.py +0 -0
  99. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/templates/__init__.py +0 -0
  100. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/templates/example_app.py +0 -0
  101. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/typing_utils.py +0 -0
  102. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/user/__init__.py +0 -0
  103. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/user/sign_in.py +0 -0
  104. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/utils/__init__.py +0 -0
  105. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/utils/app_uri.py +0 -0
  106. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/utils/cache_state.py +0 -0
  107. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/utils/multipart_uploader.py +0 -0
  108. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/utils/seq_util.py +0 -0
  109. {pybiolib-1.1.1917 → pybiolib-1.1.1921}/biolib/utils/zip/remote_zip.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: pybiolib
3
- Version: 1.1.1917
3
+ Version: 1.1.1921
4
4
  Summary: BioLib Python Client
5
5
  Home-page: https://github.com/biolib
6
6
  License: MIT
@@ -28,6 +28,9 @@ class DataRecord:
28
28
 
29
29
  self._name = uri_parsed['app_name']
30
30
 
31
+ def __repr__(self):
32
+ return f'DataRecord: {self._uri}'
33
+
31
34
  @property
32
35
  def uri(self) -> str:
33
36
  return self._uri
@@ -91,6 +94,8 @@ class DataRecord:
91
94
  if uri:
92
95
  uri_parsed = parse_app_uri(uri, use_account_as_name_default=False)
93
96
  params['account_handle'] = uri_parsed['account_handle_normalized']
97
+ if uri_parsed['app_name_normalized']:
98
+ params['app_name'] = uri_parsed['app_name_normalized']
94
99
 
95
100
  results = api_client.get(path='/apps/', params=params).json()['results']
96
101
  if count is None and len(results) == max_page_size:
@@ -1,11 +1,11 @@
1
1
  # Imports to hide and use as private internal utils
2
- from biolib._internal.data_record import DataRecord as _DataRecord
3
2
  from biolib._internal.push_application import push_application as _push_application
4
3
  from biolib._internal.push_application import set_app_version_as_active as _set_app_version_as_active
5
4
  from biolib.app import BioLibApp as _BioLibApp
6
5
  from biolib.typing_utils import Optional as _Optional
7
6
 
8
7
  # Imports to expose as public API
8
+ from biolib._internal.data_record import DataRecord
9
9
  from biolib._internal.runtime import Runtime
10
10
 
11
11
 
@@ -42,5 +42,5 @@ def get_app_version_pytest_plugin(app_version: _BioLibApp):
42
42
  return AppVersionFixturePlugin(app_version)
43
43
 
44
44
 
45
- def create_data_record(destination: str, data_path: str, name: _Optional[str] = None) -> _DataRecord:
46
- return _DataRecord.create(destination, data_path, name)
45
+ def create_data_record(destination: str, data_path: str, name: _Optional[str] = None) -> DataRecord:
46
+ return DataRecord.create(destination, data_path, name)
@@ -1,6 +1,6 @@
1
1
  [tool.poetry]
2
2
  name = "pybiolib"
3
- version = "1.1.1917"
3
+ version = "1.1.1921"
4
4
  description = "BioLib Python Client"
5
5
  readme = "README.md"
6
6
  license = "MIT"
File without changes
File without changes