pyatoa 0.4.0__tar.gz → 0.4.2__tar.gz

{pyatoa-0.4.0 → pyatoa-0.4.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: pyatoa
-Version: 0.4.0
+Version: 0.4.2
 Summary: Python's Adjoint Tomography Operations Assistant
 Author: adjTomo Dev Team
 Author-email: adjtomo@gmail.com

{pyatoa-0.4.0 → pyatoa-0.4.2}/pyatoa/core/manager.py

@@ -492,11 +492,14 @@ class Manager:
             net, sta = code.split('.')
             sta_tag = f"{net}.{sta}"
             if sta_tag in ds.waveforms.list():
-                self.inv = ds.waveforms[sta_tag].StationXML
                 self.st_syn = ds.waveforms[sta_tag][synthetic_tag or
                                                     self.config.synthetic_tag]
                 self.st_obs = ds.waveforms[sta_tag][observed_tag or
                                                     self.config.observed_tag]
+                try:
+                    self.inv = ds.waveforms[sta_tag].StationXML
+                except AttributeError:
+                    logger.warning("no StationXML attribute found for station")
                 if windows:
                     self.windows = load_windows(ds, net, sta, iter_, step, 
                                                 return_previous=False)
@@ -1239,7 +1242,8 @@ class Manager:
         else:
             logger.debug("no windows given, adjoint sources will be "
                          "calculated on full trace")
-            for comp in self.config.component_list:
+            component_list = list(set(_.stats.component for _ in self.st_syn))
+            for comp in component_list:
                 dt = self.st_obs.select(component=comp)[0].stats.delta
                 npts = self.st_obs.select(component=comp)[0].stats.npts
                 # We offset the bounds of the entire trace by 1s to play nice

{pyatoa-0.4.0 → pyatoa-0.4.2}/pyatoa/visuals/wave_maker.py

@@ -6,6 +6,7 @@ outputted by Pyflex as well as adjoint sources from Pyadjoint.
 Flexible to allow for only waveform plots, or for the addition of objects
 based on inputs.
 """
+from re import I
 import numpy as np
 import matplotlib as mpl
 import matplotlib.pyplot as plt
@@ -227,7 +228,7 @@ class WaveMaker:
                       label=f"{obs.id} ({self.config.st_obs_type.upper()})",
                       linewidth=linewidth)
         a2, = ax.plot(self.time_axis, syn.data, syn_color, zorder=10, 
-                      label=f"{syn.id} ({self.config.st_obs_type.upper()})",
+                      label=f"{syn.id} ({self.config.st_syn_type.upper()})",
                       linewidth=linewidth)
 
         return [a1, a2]
@@ -485,7 +486,7 @@ class WaveMaker:
         b1, = ax.plot(self.time_axis, adjsrc.adjoint_source[::-1], color, 
                       alpha=alpha, linewidth=linewidth, linestyle=linestyle, 
                       zorder=9,
-                      label=fr"Adjoint Source ($\chi$={adjsrc.misfit:.2f})"
+                      label=fr"Adjoint Source ($\chi$={adjsrc.misfit:.3E})"
                       )
         return [b1]
 
@@ -773,13 +774,11 @@ def format_axis(input_ax, percent_over=0.125):
     :param percent_over: the percentage above the peak value that the bounds
         of the axis will be set
     """
-    ymin, ymax = input_ax.get_ylim()
     maxvalue = max([abs(_) for _ in input_ax.get_ylim()])
     percent_over = maxvalue * percent_over
-    if abs(round(ymin / ymax)) != 0:
-        # Set bounds to be the same positive and negative
-        bounds = (-1 * (maxvalue + percent_over), (maxvalue + percent_over))
-    else: 
-        bounds = (-0.05, 1.05)
+
+    # Set bounds to be the same positive and negative
+    bounds = (-1 * (maxvalue + percent_over), (maxvalue + percent_over))
+
     input_ax.set_ylim(bounds)
 

{pyatoa-0.4.0 → pyatoa-0.4.2}/pyatoa.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: pyatoa
-Version: 0.4.0
+Version: 0.4.2
 Summary: Python's Adjoint Tomography Operations Assistant
 Author: adjTomo Dev Team
 Author-email: adjtomo@gmail.com

{pyatoa-0.4.0 → pyatoa-0.4.2}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "pyatoa"
-version = "0.4.0"
+version = "0.4.2"
 description = "Python's Adjoint Tomography Operations Assistant"
 readme = "README.md"
 requires-python = ">=3.7"