pyEQL 1.3.1__tar.gz → 1.3.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (128) hide show
  1. {pyeql-1.3.1 → pyeql-1.3.2}/.github/workflows/post-process.yml +4 -4
  2. {pyeql-1.3.1 → pyeql-1.3.2}/.github/workflows/release.yml +3 -3
  3. {pyeql-1.3.1 → pyeql-1.3.2}/.github/workflows/testing.yaml +6 -6
  4. {pyeql-1.3.1 → pyeql-1.3.2}/.github/workflows/upgrade_dependencies.yml +3 -3
  5. {pyeql-1.3.1 → pyeql-1.3.2}/CHANGELOG.md +8 -0
  6. {pyeql-1.3.1/src/pyEQL.egg-info → pyeql-1.3.2}/PKG-INFO +1 -1
  7. {pyeql-1.3.1 → pyeql-1.3.2}/docs/changelog.md +8 -0
  8. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.10.txt +55 -54
  9. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.10_extras.txt +80 -72
  10. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.11.txt +57 -56
  11. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.11_extras.txt +79 -72
  12. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.12.txt +57 -56
  13. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.12_extras.txt +79 -72
  14. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.10.txt +55 -54
  15. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.10_extras.txt +80 -72
  16. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.11.txt +57 -56
  17. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.11_extras.txt +79 -72
  18. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.12.txt +57 -56
  19. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.12_extras.txt +79 -72
  20. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.10.txt +55 -54
  21. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.10_extras.txt +80 -72
  22. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.11.txt +57 -56
  23. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.11_extras.txt +79 -72
  24. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.12.txt +57 -56
  25. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.12_extras.txt +79 -72
  26. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/solution.py +7 -6
  27. {pyeql-1.3.1 → pyeql-1.3.2/src/pyEQL.egg-info}/PKG-INFO +1 -1
  28. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_solution.py +4 -1
  29. {pyeql-1.3.1 → pyeql-1.3.2}/.coveragerc +0 -0
  30. {pyeql-1.3.1 → pyeql-1.3.2}/.gitattributes +0 -0
  31. {pyeql-1.3.1 → pyeql-1.3.2}/.github/dependabot.yml +0 -0
  32. {pyeql-1.3.1 → pyeql-1.3.2}/.github/pull_request_template.md +0 -0
  33. {pyeql-1.3.1 → pyeql-1.3.2}/.github/release.yml +0 -0
  34. {pyeql-1.3.1 → pyeql-1.3.2}/.gitignore +0 -0
  35. {pyeql-1.3.1 → pyeql-1.3.2}/.pre-commit-config.yaml +0 -0
  36. {pyeql-1.3.1 → pyeql-1.3.2}/.readthedocs.yml +0 -0
  37. {pyeql-1.3.1 → pyeql-1.3.2}/.zenodo.json +0 -0
  38. {pyeql-1.3.1 → pyeql-1.3.2}/AUTHORS.md +0 -0
  39. {pyeql-1.3.1 → pyeql-1.3.2}/CITATION.cff +0 -0
  40. {pyeql-1.3.1 → pyeql-1.3.2}/COPYING +0 -0
  41. {pyeql-1.3.1 → pyeql-1.3.2}/LICENSE.txt +0 -0
  42. {pyeql-1.3.1 → pyeql-1.3.2}/MANIFEST.in +0 -0
  43. {pyeql-1.3.1 → pyeql-1.3.2}/README.md +0 -0
  44. {pyeql-1.3.1 → pyeql-1.3.2}/docs/Makefile +0 -0
  45. {pyeql-1.3.1 → pyeql-1.3.2}/docs/_static/.gitignore +0 -0
  46. {pyeql-1.3.1 → pyeql-1.3.2}/docs/amounts.md +0 -0
  47. {pyeql-1.3.1 → pyeql-1.3.2}/docs/arithmetic.md +0 -0
  48. {pyeql-1.3.1 → pyeql-1.3.2}/docs/authors.md +0 -0
  49. {pyeql-1.3.1 → pyeql-1.3.2}/docs/chemistry.md +0 -0
  50. {pyeql-1.3.1 → pyeql-1.3.2}/docs/class_solution.md +0 -0
  51. {pyeql-1.3.1 → pyeql-1.3.2}/docs/conf.py +0 -0
  52. {pyeql-1.3.1 → pyeql-1.3.2}/docs/contributing.md +0 -0
  53. {pyeql-1.3.1 → pyeql-1.3.2}/docs/creating.md +0 -0
  54. {pyeql-1.3.1 → pyeql-1.3.2}/docs/database.md +0 -0
  55. {pyeql-1.3.1 → pyeql-1.3.2}/docs/engines.md +0 -0
  56. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/.ipynb_checkpoints/pyEQL_demo_1-checkpoint.ipynb +0 -0
  57. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/.ipynb_checkpoints/pyeql_demo-checkpoint.ipynb +0 -0
  58. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/.ipynb_checkpoints/pyeql_tutorial_database-checkpoint.ipynb +0 -0
  59. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/.ipynb_checkpoints/pyeql_tutorial_osmotic_pressure-checkpoint.ipynb +0 -0
  60. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/.ipynb_checkpoints/speedup-checkpoint.ipynb +0 -0
  61. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/pyeql_demo.ipynb +0 -0
  62. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/pyeql_tutorial_activity.ipynb +0 -0
  63. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/pyeql_tutorial_carbonate.ipynb +0 -0
  64. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/pyeql_tutorial_database.ipynb +0 -0
  65. {pyeql-1.3.1 → pyeql-1.3.2}/docs/examples/pyeql_tutorial_osmotic_pressure.ipynb +0 -0
  66. {pyeql-1.3.1 → pyeql-1.3.2}/docs/index.md +0 -0
  67. {pyeql-1.3.1 → pyeql-1.3.2}/docs/installation.md +0 -0
  68. {pyeql-1.3.1 → pyeql-1.3.2}/docs/internal.md +0 -0
  69. {pyeql-1.3.1 → pyeql-1.3.2}/docs/license.md +0 -0
  70. {pyeql-1.3.1 → pyeql-1.3.2}/docs/mixing.md +0 -0
  71. {pyeql-1.3.1 → pyeql-1.3.2}/docs/quickstart.md +0 -0
  72. {pyeql-1.3.1 → pyeql-1.3.2}/docs/requirements.txt +0 -0
  73. {pyeql-1.3.1 → pyeql-1.3.2}/docs/serialization.md +0 -0
  74. {pyeql-1.3.1 → pyeql-1.3.2}/docs/tutorials.md +0 -0
  75. {pyeql-1.3.1 → pyeql-1.3.2}/docs/units.md +0 -0
  76. {pyeql-1.3.1 → pyeql-1.3.2}/pyeql-logo.png +0 -0
  77. {pyeql-1.3.1 → pyeql-1.3.2}/pyeql-logo.svg +0 -0
  78. {pyeql-1.3.1 → pyeql-1.3.2}/pyproject.toml +0 -0
  79. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.9.txt +0 -0
  80. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/macos-latest_py3.9_extras.txt +0 -0
  81. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.9.txt +0 -0
  82. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/ubuntu-latest_py3.9_extras.txt +0 -0
  83. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.9.txt +0 -0
  84. {pyeql-1.3.1 → pyeql-1.3.2}/requirements/windows-latest_py3.9_extras.txt +0 -0
  85. {pyeql-1.3.1 → pyeql-1.3.2}/setup.cfg +0 -0
  86. {pyeql-1.3.1 → pyeql-1.3.2}/setup.py +0 -0
  87. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/__init__.py +0 -0
  88. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/activity_correction.py +0 -0
  89. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/database/geothermal.dat +0 -0
  90. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/database/llnl.dat +0 -0
  91. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/database/phreeqc_license.txt +0 -0
  92. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/database/pyeql_db.json +0 -0
  93. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/engines.py +0 -0
  94. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/equilibrium.py +0 -0
  95. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/functions.py +0 -0
  96. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/presets/Ringers lactate.yaml +0 -0
  97. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/presets/normal saline.yaml +0 -0
  98. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/presets/rainwater.yaml +0 -0
  99. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/presets/seawater.yaml +0 -0
  100. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/presets/urine.yaml +0 -0
  101. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/presets/wastewater.yaml +0 -0
  102. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/py.typed +0 -0
  103. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/salt_ion_match.py +0 -0
  104. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/solute.py +0 -0
  105. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL/utils.py +0 -0
  106. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL.egg-info/SOURCES.txt +0 -0
  107. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL.egg-info/dependency_links.txt +0 -0
  108. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL.egg-info/requires.txt +0 -0
  109. {pyeql-1.3.1 → pyeql-1.3.2}/src/pyEQL.egg-info/top_level.txt +0 -0
  110. {pyeql-1.3.1 → pyeql-1.3.2}/tests/conftest.py +0 -0
  111. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_activity.py +0 -0
  112. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_bulk_properties.py +0 -0
  113. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_debye_length.py +0 -0
  114. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_density.py +0 -0
  115. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_dielectric.py +0 -0
  116. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_effective_pitzer.py +0 -0
  117. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_equilibrium.py +0 -0
  118. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_functions.py +0 -0
  119. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_logging.py +0 -0
  120. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_mixed_electrolyte_activity.py +0 -0
  121. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_osmotic_coeff.py +0 -0
  122. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_phreeqc.py +0 -0
  123. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_salt_matching.py +0 -0
  124. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_solute.py +0 -0
  125. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_solute_properties.py +0 -0
  126. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_utils.py +0 -0
  127. {pyeql-1.3.1 → pyeql-1.3.2}/tests/test_volume_concentration.py +0 -0
  128. {pyeql-1.3.1 → pyeql-1.3.2}/tox.ini +0 -0
@@ -15,11 +15,11 @@ jobs:
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- - uses: actions/checkout@v4
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  id-token: write # IMPORTANT: this permission is mandatory for trusted publishing
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@@ -5,6 +5,14 @@ All notable changes to this project will be documented in this file.
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  The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
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  and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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+ ## [1.3.2] - 2025-09-15
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+
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+ ### Fixed
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+ - `Solution.get_viscosity_kinematic()`: A recent change to get_salt_dict (#258) created a problem with `get_viscosity_kinetmatic`
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+ in which an empty solution would cause the method to return an error. This has been fixed, and unit tests added for both
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+ `get_viscosity_kinematic` and `get_viscosity_dynamic`.
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  ## [1.3.1] - 2025-08-18
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  Metadata-Version: 2.4
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  Name: pyEQL
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- Version: 1.3.1
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  Summary: A python interface for solution chemistry
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  Author-email: Ryan Kingsbury <kingsbury@princeton.edu>
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  License-Expression: LGPL-3.0-or-later
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+ ## [1.3.2] - 2025-09-15
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+ ### Fixed
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+ - `Solution.get_viscosity_kinematic()`: A recent change to get_salt_dict (#258) created a problem with `get_viscosity_kinetmatic`
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+ in which an empty solution would cause the method to return an error. This has been fixed, and unit tests added for both
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+ `get_viscosity_kinematic` and `get_viscosity_dynamic`.
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  ## [1.3.1] - 2025-08-18
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  # referencing
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  # via paramiko
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- boto3==1.37.31
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+ bibtexparser==1.4.3
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+ # via pymatgen
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+ boto3==1.40.27
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- certifi==2025.1.31
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- charset-normalizer==3.4.1
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- cryptography==44.0.2
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- dnspython==2.7.0
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  # via
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- fonttools==4.57.0
48
+ fonttools==4.59.2
47
49
  # via matplotlib
48
50
  iapws==1.5.4
49
51
  # via pyEQL (setup.py)
50
52
  idna==3.10
51
53
  # via requests
54
+ invoke==2.2.0
55
+ # via paramiko
52
56
  jmespath==1.0.1
53
57
  # via
54
58
  # boto3
55
59
  # botocore
56
- joblib==1.4.2
60
+ joblib==1.5.2
57
61
  # via pymatgen
58
62
  jsonlines==4.0.0
59
63
  # via maggma
60
- jsonschema==4.23.0
64
+ jsonschema==4.25.1
61
65
  # via maggma
62
- jsonschema-specifications==2024.10.1
66
+ jsonschema-specifications==2025.9.1
63
67
  # via jsonschema
64
- kiwisolver==1.4.8
68
+ kiwisolver==1.4.9
65
69
  # via matplotlib
66
- latexcodec==3.0.0
67
- # via pybtex
68
- maggma==0.71.5
70
+ maggma==0.72.0
69
71
  # via pyEQL (setup.py)
70
- matplotlib==3.10.1
72
+ matplotlib==3.10.6
71
73
  # via pymatgen
72
74
  mongomock==4.3.0
73
75
  # via maggma
@@ -78,13 +80,13 @@ monty==2025.3.3
78
80
  # pymatgen
79
81
  mpmath==1.3.0
80
82
  # via sympy
81
- msgpack==1.1.0
83
+ msgpack==1.1.1
82
84
  # via maggma
83
- narwhals==1.34.1
85
+ narwhals==2.4.0
84
86
  # via plotly
85
87
  networkx==3.4.2
86
88
  # via pymatgen
87
- numpy==2.2.4
89
+ numpy==2.2.6
88
90
  # via
89
91
  # contourpy
90
92
  # maggma
@@ -96,48 +98,48 @@ numpy==2.2.4
96
98
  # pymatgen
97
99
  # scipy
98
100
  # spglib
99
- orjson==3.10.16
100
- # via maggma
101
- packaging==24.2
101
+ orjson==3.11.3
102
+ # via
103
+ # maggma
104
+ # pymatgen
105
+ packaging==25.0
102
106
  # via
103
107
  # matplotlib
104
108
  # mongomock
105
109
  # plotly
106
110
  palettable==3.3.3
107
111
  # via pymatgen
108
- pandas==2.2.3
112
+ pandas==2.3.2
109
113
  # via
110
114
  # maggma
111
115
  # pymatgen
112
- paramiko==3.5.1
116
+ paramiko==4.0.0
113
117
  # via sshtunnel
114
118
  periodictable==2.0.2
115
119
  # via phreeqpython
116
- phreeqpython==1.5.4
120
+ phreeqpython==1.5.5
117
121
  # via pyEQL (setup.py)
118
- pillow==11.1.0
122
+ pillow==11.3.0
119
123
  # via matplotlib
120
124
  pint==0.24.4
121
125
  # via pyEQL (setup.py)
122
- platformdirs==4.3.7
126
+ platformdirs==4.4.0
123
127
  # via pint
124
- plotly==6.0.1
128
+ plotly==6.3.0
125
129
  # via pymatgen
126
- pybtex==0.24.0
127
- # via pymatgen
128
- pycparser==2.22
130
+ pycparser==2.23
129
131
  # via cffi
130
- pydantic==2.11.3
132
+ pydantic==2.11.7
131
133
  # via
132
134
  # maggma
133
135
  # pydantic-settings
134
- pydantic-core==2.33.1
136
+ pydantic-core==2.33.2
135
137
  # via pydantic
136
- pydantic-settings==2.8.1
138
+ pydantic-settings==2.10.1
137
139
  # via maggma
138
140
  pydash==8.0.5
139
141
  # via maggma
140
- pymatgen==2025.3.10
142
+ pymatgen==2025.6.14
141
143
  # via pyEQL (setup.py)
142
144
  pymongo==4.10.1
143
145
  # via maggma
@@ -145,6 +147,7 @@ pynacl==1.5.0
145
147
  # via paramiko
146
148
  pyparsing==3.2.3
147
149
  # via
150
+ # bibtexparser
148
151
  # matplotlib
149
152
  # periodictable
150
153
  python-dateutil==2.9.0.post0
@@ -153,51 +156,47 @@ python-dateutil==2.9.0.post0
153
156
  # maggma
154
157
  # matplotlib
155
158
  # pandas
156
- python-dotenv==1.1.0
159
+ python-dotenv==1.1.1
157
160
  # via pydantic-settings
158
161
  pytz==2025.2
159
162
  # via
160
163
  # mongomock
161
164
  # pandas
162
- pyyaml==6.0.2
163
- # via pybtex
164
- pyzmq==26.4.0
165
+ pyzmq==27.1.0
165
166
  # via maggma
166
167
  referencing==0.36.2
167
168
  # via
168
169
  # jsonschema
169
170
  # jsonschema-specifications
170
- requests==2.32.4
171
+ requests==2.32.5
171
172
  # via pymatgen
172
- rpds-py==0.24.0
173
+ rpds-py==0.27.1
173
174
  # via
174
175
  # jsonschema
175
176
  # referencing
176
- ruamel-yaml==0.18.10
177
+ ruamel-yaml==0.18.15
177
178
  # via
178
179
  # maggma
179
180
  # monty
180
181
  # pymatgen
181
182
  ruamel-yaml-clib==0.2.12
182
183
  # via ruamel-yaml
183
- s3transfer==0.11.4
184
+ s3transfer==0.14.0
184
185
  # via boto3
185
- scipy==1.15.2
186
+ scipy==1.15.3
186
187
  # via
187
188
  # iapws
188
189
  # pyEQL (setup.py)
189
190
  # pymatgen
190
- sentinels==1.0.0
191
+ sentinels==1.1.1
191
192
  # via mongomock
192
193
  six==1.17.0
193
- # via
194
- # pybtex
195
- # python-dateutil
194
+ # via python-dateutil
196
195
  spglib==2.6.0
197
196
  # via pymatgen
198
197
  sshtunnel==0.4.0
199
198
  # via maggma
200
- sympy==1.13.3
199
+ sympy==1.14.0
201
200
  # via pymatgen
202
201
  tabulate==0.9.0
203
202
  # via pymatgen
@@ -205,7 +204,7 @@ tqdm==4.67.1
205
204
  # via
206
205
  # maggma
207
206
  # pymatgen
208
- typing-extensions==4.13.1
207
+ typing-extensions==4.15.0
209
208
  # via
210
209
  # flexcache
211
210
  # flexparser
@@ -216,11 +215,13 @@ typing-extensions==4.13.1
216
215
  # referencing
217
216
  # spglib
218
217
  # typing-inspection
219
- typing-inspection==0.4.0
220
- # via pydantic
218
+ typing-inspection==0.4.1
219
+ # via
220
+ # pydantic
221
+ # pydantic-settings
221
222
  tzdata==2025.2
222
223
  # via pandas
223
- uncertainties==3.2.2
224
+ uncertainties==3.2.3
224
225
  # via pymatgen
225
226
  urllib3==2.5.0
226
227
  # via