pwact 0.3.0__tar.gz → 0.3.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (71) hide show
  1. {pwact-0.3.0 → pwact-0.3.2}/PKG-INFO +2 -2
  2. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/environment.py +1 -1
  3. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/iter_input.py +1 -1
  4. {pwact-0.3.0 → pwact-0.3.2}/pwact/main.py +12 -6
  5. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/process_tool.py +1 -1
  6. {pwact-0.3.0 → pwact-0.3.2}/pwact.egg-info/PKG-INFO +2 -2
  7. {pwact-0.3.0 → pwact-0.3.2}/setup.py +2 -2
  8. {pwact-0.3.0 → pwact-0.3.2}/LICENSE +0 -0
  9. {pwact-0.3.0 → pwact-0.3.2}/README.md +0 -0
  10. {pwact-0.3.0 → pwact-0.3.2}/pwact/__init__.py +0 -0
  11. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/__init__.py +0 -0
  12. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/explore/__init__.py +0 -0
  13. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/explore/run_model_md.py +0 -0
  14. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/explore/select_image.py +0 -0
  15. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/__init__.py +0 -0
  16. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/aimd.py +0 -0
  17. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/direct.py +0 -0
  18. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/duplicate_scale.py +0 -0
  19. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/explore.py +0 -0
  20. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/init_bulk_run.py +0 -0
  21. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/relabel.py +0 -0
  22. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/init_bulk/relax.py +0 -0
  23. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/label/__init__.py +0 -0
  24. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/label/labeling.py +0 -0
  25. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/slurm/__init__.py +0 -0
  26. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/slurm/slurm.py +0 -0
  27. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/slurm/slurm_tool.py +0 -0
  28. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/test/__init__.py +0 -0
  29. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/test/test.py +0 -0
  30. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/train/__init__.py +0 -0
  31. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/train/dp_kpu.py +0 -0
  32. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/train/train_model.py +0 -0
  33. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/__init__.py +0 -0
  34. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/cmd_infos.py +0 -0
  35. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/init_bulk_input.py +0 -0
  36. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/resource.py +0 -0
  37. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/scf_param.py +0 -0
  38. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/train_param/__init__.py +0 -0
  39. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/train_param/model_param.py +0 -0
  40. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/train_param/nep_param.py +0 -0
  41. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/train_param/nn_feature_type.py +0 -0
  42. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/train_param/optimizer_param.py +0 -0
  43. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/train_param/train_param.py +0 -0
  44. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/train_param/work_file_param.py +0 -0
  45. {pwact-0.3.0 → pwact-0.3.2}/pwact/active_learning/user_input/workdir.py +0 -0
  46. {pwact-0.3.0 → pwact-0.3.2}/pwact/bin/__init__.py +0 -0
  47. {pwact-0.3.0 → pwact-0.3.2}/pwact/data_format/__init__.py +0 -0
  48. {pwact-0.3.0 → pwact-0.3.2}/pwact/data_format/configop.py +0 -0
  49. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/__init__.py +0 -0
  50. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/__init__.py +0 -0
  51. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/common.py +0 -0
  52. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/cp2k.py +0 -0
  53. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/cp2k_dp.py +0 -0
  54. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/do_direct_sample.py +0 -0
  55. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/do_eqv2model.py +0 -0
  56. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/lammps.py +0 -0
  57. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/app_lib/pwmat.py +0 -0
  58. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/constant.py +0 -0
  59. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/draw/__init__.py +0 -0
  60. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/draw/hist_model_devi.py +0 -0
  61. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/file_operation.py +0 -0
  62. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/format_input_output.py +0 -0
  63. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/json_operation.py +0 -0
  64. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/pre_al_data_util.py +0 -0
  65. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/slurm_script.py +0 -0
  66. {pwact-0.3.0 → pwact-0.3.2}/pwact/utils/tmp.py +0 -0
  67. {pwact-0.3.0 → pwact-0.3.2}/pwact.egg-info/SOURCES.txt +0 -0
  68. {pwact-0.3.0 → pwact-0.3.2}/pwact.egg-info/dependency_links.txt +0 -0
  69. {pwact-0.3.0 → pwact-0.3.2}/pwact.egg-info/entry_points.txt +0 -0
  70. {pwact-0.3.0 → pwact-0.3.2}/pwact.egg-info/top_level.txt +0 -0
  71. {pwact-0.3.0 → pwact-0.3.2}/setup.cfg +0 -0
@@ -1,7 +1,7 @@
1
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  Metadata-Version: 2.1
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  Name: pwact
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- Version: 0.3.0
4
- Summary: PWACT is an open-source automated active learning platform based on PWMLFF for efficient data sampling.
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+ Version: 0.3.2
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+ Summary: PWACT is an open-source automated active learning platform based on MatPL for efficient data sampling.
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  Home-page: https://github.com/LonxunQuantum/PWact
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  Author: LonxunQuantum
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  Author-email: lonxun@pwmat.com
@@ -8,7 +8,7 @@ def comm_info():
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  print("\n" + "=" * 50)
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  print(" PWACT Basic Information")
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  print("=" * 50)
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- print("Version: 0.3.0")
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+ print("Version: 0.3.1")
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  print("Compatible pwdata: >= 0.5.0")
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  print("Compatible MatPL: >= 2025.3")
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  print("Contact: support@pwmat.com")
@@ -158,7 +158,7 @@ class ExploreParam(object):
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  elif isinstance(sys_config, dict):
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  config = os.path.join(sys_config_prefix, sys_config["config"]) if sys_config_prefix is not None else sys_config["config"]
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  config_format = get_parameter("format", sys_config, PWDATA.pwmat_config)
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- if not os.path.exists:
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+ if not os.path.exists(config):
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  raise Exception("ERROR! The sys_config {} file does not exist!".format(config))
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  self.sys_configs.append(SysConfig(config, config_format))
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@@ -183,14 +183,20 @@ def gather_pwmata(input_cmds):
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  pwdata_lists = sorted(pwdata_lists)
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  save_dir = "./final_pwdata"
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  res_data_list = []
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- for pwdata in pwdata_lists: # /path/iter.0001/label/result/md.000.sys.001.t.001
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- data_name = os.path.basename(pwdata) # md.000.sys.001.t.001
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+
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+ for pwdata in pwdata_lists: # /path/iter.0001/label/result/*
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+ data_name = os.path.basename(pwdata)
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  iter_name = os.path.basename(os.path.dirname(os.path.dirname(os.path.dirname(pwdata)))) #iter.0001
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- target_dir = os.path.join(save_dir, iter_name, data_name) #./final_pwdata/iter.0001/md.000.sys.001.t.001
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+ target_dir = os.path.join(save_dir, iter_name, data_name) #./final_pwdata/iter.0001
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191
  copy_dir(pwdata, target_dir)
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- # print("target: {}\n source: {}\n".format(target_dir, pwdata))
192
- res_data_list.append(target_dir)
193
-
192
+ for path, dirList, fileList in os.walk(pwdata):
193
+ for _ in fileList:
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+ if "train.xyz" in _:
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+ res_data_list.append(os.path.join(path, _))
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+ for root, dirs, files in os.walk(pwdata):
197
+ if 'energies.npy' in files:
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+ res_data_list.append(root)
199
+
194
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  result_lines = ["\"{}\",".format(_) for _ in res_data_list]
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  result_lines = "\n".join(result_lines)
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  # result_lines = result_lines[:-1] # Filter the last ','
@@ -8,7 +8,7 @@ def kill_process(pid:str, job_id:str):
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  if job_id is None:
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  try:
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  # 发送终止信号 (SIGTERM) 给指定的进程
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- os.kill(pid, signal.SIGTERM)
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+ os.kill(int(pid), signal.SIGTERM)
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  print(f"process {pid} has been terminated.")
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  except ProcessLookupError:
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  print(f"process {pid} non-existent.")
@@ -1,7 +1,7 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: pwact
3
- Version: 0.3.0
4
- Summary: PWACT is an open-source automated active learning platform based on PWMLFF for efficient data sampling.
3
+ Version: 0.3.2
4
+ Summary: PWACT is an open-source automated active learning platform based on MatPL for efficient data sampling.
5
5
  Home-page: https://github.com/LonxunQuantum/PWact
6
6
  Author: LonxunQuantum
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  Author-email: lonxun@pwmat.com
@@ -5,10 +5,10 @@ with open("README.md", "r") as fh:
5
5
 
6
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  setuptools.setup(
7
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  name="pwact",
8
- version="0.3.0",
8
+ version="0.3.2",
9
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  author="LonxunQuantum",
10
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  author_email="lonxun@pwmat.com",
11
- description="PWACT is an open-source automated active learning platform based on PWMLFF for efficient data sampling.",
11
+ description="PWACT is an open-source automated active learning platform based on MatPL for efficient data sampling.",
12
12
  long_description=long_description,
13
13
  long_description_content_type="text/markdown",
14
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  url="https://github.com/LonxunQuantum/PWact",
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