psdi-data-conversion 0.0.30__tar.gz → 0.0.32__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- psdi_data_conversion-0.0.32/.github/workflows/ci-deploy-production.yml +61 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/PKG-INFO +19 -1
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/README.md +18 -0
- psdi_data_conversion-0.0.32/psdi_data_conversion/bin/LICENSE_ATOMSK +674 -0
- psdi_data_conversion-0.0.32/psdi_data_conversion/bin/LICENSE_C2X +674 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/accessibility.htm +1 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/convert.htm +5 -1
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/convertato.htm +4 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/convertc2x.htm +4 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/documentation.htm +2 -1
- psdi_data_conversion-0.0.32/psdi_data_conversion/static/content/download.htm +105 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/feedback.htm +1 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/header-links.html +1 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/index-versions/header-links.html +1 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/index-versions/psdi-common-footer.html +1 -1
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/index-versions/psdi-common-header.html +1 -1
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/psdi-common-footer.html +1 -1
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/psdi-common-header.html +1 -1
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/content/report.htm +1 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/common.js +7 -1
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/format.js +0 -4
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/report.js +0 -4
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/templates/index.htm +13 -9
- psdi_data_conversion-0.0.30/.github/workflows/ci-deploy-production.yml +0 -49
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/ci-cron.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/ci-feature.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/ci-main.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/ci-pr.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/ci-rc-hotfix.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/ci-release.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-anchore-scan.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-container-push.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-deploy-azure.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-deploy-k8s.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-open-pull-request.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-publish-doc.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-tag.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-test-gui.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.github/workflows/job-test-python.yml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/.gitignore +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/CHANGELOG.md +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/CONTRIBUTING.md +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/LICENSE +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/__init__.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/app.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/bin/linux/atomsk +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/bin/linux/c2x +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/bin/mac/atomsk +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/bin/mac/c2x +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/constants.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/converter.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/converters/__init__.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/converters/atomsk.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/converters/base.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/converters/c2x.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/converters/openbabel.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/database.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/dist.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/file_io.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/log_utility.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/main.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/scripts/atomsk.sh +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/scripts/c2x.sh +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/security.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/data/data.json +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/colormode-toggle-dm.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/colormode-toggle-lm.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/psdi-icon-dark.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/psdi-icon-light.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/psdi-logo-darktext-simple.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/psdi-logo-darktext.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/psdi-logo-lighttext-simple.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/psdi-logo-lighttext.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-bluesky-black.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-bluesky-white.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-instagram-black.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-instagram-white.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-linkedin-black.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-linkedin-white.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-mastodon-black.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-mastodon-white.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-x-black.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-x-white.svg +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-youtube-black.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/social-logo-youtube-white.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/ukri-epsr-logo-darktext.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/ukri-epsr-logo-lighttext.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/ukri-logo-darktext.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/img/ukri-logo-lighttext.png +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/accessibility.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/convert.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/convert_common.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/convertato.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/convertc2x.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/data.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/load_accessibility.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/javascript/psdi-common.js +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/styles/format.css +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/static/styles/psdi-common.css +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/testing/__init__.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/testing/constants.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/testing/conversion_callbacks.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/testing/conversion_test_specs.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/psdi_data_conversion/testing/utils.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/pyproject.toml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/run_local.sh +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/scripts/setup_bin.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/1ARJ.mmcif +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/1NE6.mmcif +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/5a9z-assembly1.cif +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/Fapatite.ins +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/aceticacid.mol +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/benzyne.molden +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/caffeine-smi.tar +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/caffeine-smi.tar.gz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/caffeine-smi.zip +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/caffeine.inchi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/ch3cl-esp.cub +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/cyclopropane_err.mol +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/ethanol.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/fullRhinovirus.pdb +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/hemoglobin.pdb +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/nacl.cif +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/nacl.mol +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/aceticacid.log.txt +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/aceticacid.mol2 +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-2D-fastest.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-3D-best.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-ia-okx-oof4.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-ia-okx-oof4l5.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-ia-okx.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-ia-ox.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-ia.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine-no-flags.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine_a_in.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine_a_in_kx_f4_l5_out.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine_a_in_kx_f4_out.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine_a_in_kx_out.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/caffeine_a_in_x_out.smi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/error_Fapatite_ins_to_cml_OB +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/error_cyclopropane_mol_to_xyz_c2x +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/error_nacl_mol_to_xyz_atomsk +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/hemoglobin_Atomsk.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/hemoglobin_c2x.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/nacl.log +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/nacl.mol +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/quartz_OB.cif +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/quartz_OB.log.txt +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/quartz_atomsk.cif +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/quartz_atomsk.log.txt +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/standard_test.inchi +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/xyz_files-mol.zip +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/output/xyz_files.log.txt +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/periodic_dmol3.outmol +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/quartz.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/quartz_err.xyz +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/test_data/standard_test.cdxml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/cli_test.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/converter_test.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/database_test.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/dist_test.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/file_io_test.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/logging_test.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/security_test.py +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/selenium/files/standard_test.cdxml +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/selenium/run.sh +0 -0
- {psdi_data_conversion-0.0.30 → psdi_data_conversion-0.0.32}/tests/selenium/selenium_tests.py +0 -0
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# Workflow for manually triggering deployment of latest release version to the production environment
|
2
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+
|
3
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+
# It is intended that this workflow be manually triggered after the 'ci-release.yml' job has been shown
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+
# to successfully deploy the latest release version to the staging cluster.
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5
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+
|
6
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+
# To be more specific, this workflow deploys the container in the GitHub Container Registry namespace for this
|
7
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+
# repo whose tag corresponds to the highest version number, while only considering tags of the form 'v*.*.*',
|
8
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+
# where '*' signify non-negative integers.
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9
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+
|
10
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+
name: CI - Deploy to production cluster
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11
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+
run-name: CI - Deploy to production cluster
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on:
|
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+
workflow_dispatch:
|
14
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+
|
15
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+
jobs:
|
16
|
+
check-branch:
|
17
|
+
# Check that this job is being run on the release branch
|
18
|
+
runs-on: psdi-uk-runners
|
19
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+
steps:
|
20
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+
- name: Check branch (success)
|
21
|
+
if: github.ref == 'refs/heads/release'
|
22
|
+
run: echo "Success - this is being run on the 'release' branch"
|
23
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+
- name: Check branch (failure)
|
24
|
+
if: github.ref != 'refs/heads/release'
|
25
|
+
run: |
|
26
|
+
echo "ERROR: This workflow can only be run on the 'release' branch"
|
27
|
+
false # Command that always fails, to signal the job to fail
|
28
|
+
|
29
|
+
get-latest-release-tag:
|
30
|
+
# run on our self hosted github runners enabling access to STFC infrastructure
|
31
|
+
runs-on: psdi-uk-runners
|
32
|
+
needs: check-branch
|
33
|
+
outputs:
|
34
|
+
tag: ${{ steps.get-tag.outputs.TARGET_TAG }}
|
35
|
+
steps:
|
36
|
+
- uses: actions/checkout@v4
|
37
|
+
- name: Get latest tag in the relase branch
|
38
|
+
id: get-tag
|
39
|
+
run: |
|
40
|
+
# Use GitHub CR API to get list of all tags
|
41
|
+
GHCR_TOKEN=$(echo -n "${{ secrets.GITHUB_TOKEN }}" | base64 -w 0)
|
42
|
+
echo "Requesting list of tags from GitHub CR for repo..."
|
43
|
+
RESPONSE=$(curl -s -H "Authorization: Bearer $GHCR_TOKEN" "https://ghcr.io/v2/psdi-uk/psdi-data-conversion/data-conversion/tags/list")
|
44
|
+
echo "Response recieved = $RESPONSE"
|
45
|
+
# Extract only the tags corresponding to releases, i.e. of the form 'v*.*.*'
|
46
|
+
echo "Extracting tags from response..."
|
47
|
+
TAGS=$(echo "$RESPONSE" | jq -r '."tags"[]' | grep -E '^v[0-9]+\.[0-9]+\.[0-9]+')
|
48
|
+
echo "Extracted tags = $TAGS"
|
49
|
+
# Find the highest version number
|
50
|
+
TARGET_TAG=$(echo "$TAGS" | sort -V | tail -n 1)
|
51
|
+
echo "TARGET_TAG=$TARGET_TAG" >> "$GITHUB_OUTPUT"
|
52
|
+
echo "Highest version tag found to be = $TARGET_TAG"
|
53
|
+
|
54
|
+
# Deploy container with tag to production environment
|
55
|
+
deploy-stfc-production-k8s:
|
56
|
+
needs: get-latest-release-tag
|
57
|
+
uses: ./.github/workflows/job-deploy-k8s.yml # use the callable deploy job
|
58
|
+
secrets: inherit # pass all secrets for the environment
|
59
|
+
with:
|
60
|
+
container_tag: ${{ needs.get-latest-release-tag.outputs.tag }}
|
61
|
+
environment: production
|
@@ -1,6 +1,6 @@
|
|
1
1
|
Metadata-Version: 2.1
|
2
2
|
Name: psdi_data_conversion
|
3
|
-
Version: 0.0.
|
3
|
+
Version: 0.0.32
|
4
4
|
Summary: Chemistry file format conversion service, provided by PSDI
|
5
5
|
Project-URL: Homepage, https://psdidev2.azurewebsites.net/
|
6
6
|
Project-URL: Documentation, https://psdi-uk.github.io/psdi-data-conversion/
|
@@ -278,6 +278,9 @@ This is the repository for the PSDI PF2 Chemistry File Format Conversion project
|
|
278
278
|
- [Installation and Setup](#installation-and-setup)
|
279
279
|
- [Running the App](#running-the-app)
|
280
280
|
- [Testing](#testing)
|
281
|
+
- [Licencing](#licencing)
|
282
|
+
- [Contributors](#contributors)
|
283
|
+
- [Funding](#funding)
|
281
284
|
|
282
285
|
## Project Structure
|
283
286
|
|
@@ -650,6 +653,21 @@ cd tests/selenium
|
|
650
653
|
kill %1 # Stop the web server - it may have a different job ID. If you don't know the job ID, you can alternatively call "fg" to bring the job to the foreground, then type CTRL+c to stop it
|
651
654
|
```
|
652
655
|
|
656
|
+
## Licencing
|
657
|
+
|
658
|
+
This project is provided under the Apache License version 2.0, the terms of which can be found in the file `LICENSE`.
|
659
|
+
|
660
|
+
This project redistributes compiled binaries for the Atomsk and c2x converters. These are both licenced under the
|
661
|
+
GNU General Public License version 3 and are redistributed per its terms. Any further redistribution of these binaries,
|
662
|
+
including redistribution of this project as a whole, including them, must also follow the terms of this licence.
|
663
|
+
|
664
|
+
This requires conspicuously displaying notice of this licence, providing the text of of the licence (provided here in
|
665
|
+
the files `psdi_data_conversion/bin/LICENSE_C2X` and `psdi_data_conversion/bin/LICENSE_ATOMSK`), and appropriately
|
666
|
+
conveying the source code for each of these. Their respective source code may be found at:
|
667
|
+
|
668
|
+
- Atomsk: https://github.com/pierrehirel/atomsk/
|
669
|
+
- c2x: https://www.c2x.org.uk/downloads/
|
670
|
+
|
653
671
|
## Contributors
|
654
672
|
|
655
673
|
- Ray Whorley
|
@@ -33,6 +33,9 @@ This is the repository for the PSDI PF2 Chemistry File Format Conversion project
|
|
33
33
|
- [Installation and Setup](#installation-and-setup)
|
34
34
|
- [Running the App](#running-the-app)
|
35
35
|
- [Testing](#testing)
|
36
|
+
- [Licencing](#licencing)
|
37
|
+
- [Contributors](#contributors)
|
38
|
+
- [Funding](#funding)
|
36
39
|
|
37
40
|
## Project Structure
|
38
41
|
|
@@ -405,6 +408,21 @@ cd tests/selenium
|
|
405
408
|
kill %1 # Stop the web server - it may have a different job ID. If you don't know the job ID, you can alternatively call "fg" to bring the job to the foreground, then type CTRL+c to stop it
|
406
409
|
```
|
407
410
|
|
411
|
+
## Licencing
|
412
|
+
|
413
|
+
This project is provided under the Apache License version 2.0, the terms of which can be found in the file `LICENSE`.
|
414
|
+
|
415
|
+
This project redistributes compiled binaries for the Atomsk and c2x converters. These are both licenced under the
|
416
|
+
GNU General Public License version 3 and are redistributed per its terms. Any further redistribution of these binaries,
|
417
|
+
including redistribution of this project as a whole, including them, must also follow the terms of this licence.
|
418
|
+
|
419
|
+
This requires conspicuously displaying notice of this licence, providing the text of of the licence (provided here in
|
420
|
+
the files `psdi_data_conversion/bin/LICENSE_C2X` and `psdi_data_conversion/bin/LICENSE_ATOMSK`), and appropriately
|
421
|
+
conveying the source code for each of these. Their respective source code may be found at:
|
422
|
+
|
423
|
+
- Atomsk: https://github.com/pierrehirel/atomsk/
|
424
|
+
- c2x: https://www.c2x.org.uk/downloads/
|
425
|
+
|
408
426
|
## Contributors
|
409
427
|
|
410
428
|
- Ray Whorley
|