proface-abaqus-pre 0.1.0rc1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- proface_abaqus_pre-0.1.0rc1/.github/workflows/python-publish.yml +77 -0
- proface_abaqus_pre-0.1.0rc1/.gitignore +17 -0
- proface_abaqus_pre-0.1.0rc1/.pre-commit-config.yaml +28 -0
- proface_abaqus_pre-0.1.0rc1/LICENSES/CC0-1.0.txt +121 -0
- proface_abaqus_pre-0.1.0rc1/LICENSES/MIT.txt +18 -0
- proface_abaqus_pre-0.1.0rc1/PKG-INFO +78 -0
- proface_abaqus_pre-0.1.0rc1/README.md +56 -0
- proface_abaqus_pre-0.1.0rc1/pyproject.toml +77 -0
- proface_abaqus_pre-0.1.0rc1/src/proface/abaqus/preprocessor/__init__.py +10 -0
- proface_abaqus_pre-0.1.0rc1/src/proface/abaqus/preprocessor/_version.py +21 -0
- proface_abaqus_pre-0.1.0rc1/src/proface/abaqus/preprocessor/translator.py +337 -0
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# SPDX-FileCopyrightText: Copyright (c) 2020 GitHub
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# SPDX-License-Identifier: MIT
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# Original file downloaded from
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# https://raw.githubusercontent.com/actions/starter-workflows/00795b7feebceed43fe2510ccb976238441d9c07/ci/python-publish.yml
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# This workflow will upload a Python Package to PyPI when a release is created
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# This workflow uses actions that are not certified by GitHub.
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# They are provided by a third-party and are governed by
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# separate terms of service, privacy policy, and support
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# documentation.
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name: Upload Python Package
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on:
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release:
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types: [published]
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contents: read
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python-version: "3.x"
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run: |
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python -m pip install build
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python -m build
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- name: Upload distributions
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uses: actions/upload-artifact@v4
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name: release-dists
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needs:
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- release-build
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permissions:
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# IMPORTANT: this permission is mandatory for trusted publishing
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id-token: write
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environment:
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name: pypi
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# url: https://pypi.org/p/YOURPROJECT
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#
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url: https://pypi.org/project/proface-abaqus-pre/${{ github.event.release.name }}
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uses: pypa/gh-action-pypi-publish@release/v1
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packages-dir: dist/
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# SPDX-FileCopyrightText: 2025 ProFACE developers
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# SPDX-License-Identifier: CC0-1.0
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# Python-generated files
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build/
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dist/
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wheels/
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# Virtual environments
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# hatch-vcs build hook
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src/proface/abaqus/preprocessor/_version.py
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# See https://pre-commit.com for more information
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# See https://pre-commit.com/hooks.html for more hooks
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repos:
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# general checks
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# check file formats
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- repo: https://github.com/astral-sh/ruff-pre-commit
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rev: v0.11.3
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hooks:
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- id: ruff
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- id: ruff-format
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- repo: https://github.com/fsfe/reuse-tool
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rev: v5.0.2
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- id: reuse
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MIT License
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Copyright (c) <year> <copyright holders>
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Permission is hereby granted, free of charge, to any person obtaining a copy of this software and
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copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the
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following conditions:
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The above copyright notice and this permission notice shall be included in all copies or substantial
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portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
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LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO
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EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER
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IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE
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USE OR OTHER DEALINGS IN THE SOFTWARE.
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Metadata-Version: 2.4
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Name: proface-abaqus-pre
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Version: 0.1.0rc1
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Summary: Abaqus to ProFACE preprocessor
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Project-URL: documentation, https://github.com/ProFACE-dev/proface-abaqus-pre#
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Project-URL: issues, https://github.com/ProFACE-dev/proface-abaqus-pre/issues
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Project-URL: source, https://github.com/ProFACE-dev/proface-abaqus-pre
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Author-email: Stefano Miccoli <stefano.miccoli@polimi.it>
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License-Expression: MIT
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Classifier: Development Status :: 3 - Alpha
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Classifier: Environment :: Console
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Classifier: Programming Language :: Python
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Classifier: Programming Language :: Python :: Implementation :: CPython
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Requires-Python: >=3.12
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Requires-Dist: h5py>=3.13.0
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Requires-Dist: numpy>=2.0
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Requires-Dist: proface-pre>=0.2.0
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Requires-Dist: suanpan-abaqus>=0.1.0
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Description-Content-Type: text/markdown
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<!--
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SPDX-FileCopyrightText: 2025 ProFACE developers
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+
SPDX-License-Identifier: MIT
|
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|
+
-->
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+
|
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29
|
+
# ProFACE-Abaqus-Pre
|
|
30
|
+
|
|
31
|
+
ProFACE-Abaqus-Pre is a python package that provides the `proface.preprocessor.abaqus` plugin for use with the [`proface-pre`](https://github.com/ProFACE-dev/proface-pre) command-line interface (CLI).
|
|
32
|
+
|
|
33
|
+
This plugin enables the conversion of Abaqus binary `.fil` results files to ProFACE `.h5` FEA input files.
|
|
34
|
+
|
|
35
|
+
## Installation
|
|
36
|
+
|
|
37
|
+
Install from <https://pypi.org> with
|
|
38
|
+
|
|
39
|
+
```
|
|
40
|
+
pip install proface-abaqus-pre
|
|
41
|
+
```
|
|
42
|
+
|
|
43
|
+
## Usage
|
|
44
|
+
|
|
45
|
+
Running
|
|
46
|
+
|
|
47
|
+
```
|
|
48
|
+
proface-pre example.toml
|
|
49
|
+
```
|
|
50
|
+
|
|
51
|
+
will produce `example.h5` from `example.fil`.
|
|
52
|
+
|
|
53
|
+
`example.toml` has the following format:
|
|
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|
+
|
|
55
|
+
```toml
|
|
56
|
+
fea_software = "Abaqus"
|
|
57
|
+
|
|
58
|
+
[Abaqus.input]
|
|
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|
+
fil = "example.fil" # optional if .toml and .fil have the same name
|
|
60
|
+
|
|
61
|
+
[Abaqus.results.ref_load]
|
|
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|
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step = 1 # 0 for last step
|
|
63
|
+
increment = 1 # 0 for last increment
|
|
64
|
+
```
|
|
65
|
+
|
|
66
|
+
## License
|
|
67
|
+
|
|
68
|
+
ProFACE-Abaqus-Pre is licensed under the MIT license.
|
|
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|
+
ProFACE-Pre makes no claims about [ProFACE](https://proface.polimi.it) which is a distinct program with different licensing requirements.
|
|
70
|
+
|
|
71
|
+
### Disclaimer
|
|
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|
+
|
|
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|
+
This project is not affiliated with, endorsed by, or sponsored by Dassault Systèmes, The HDF Group, or any of their respective products.
|
|
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|
+
|
|
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|
+
- Abaqus is a registered trademark of Dassault Systèmes or its subsidiaries in the United States and/or other countries.
|
|
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|
+
- HDF5 is a trademark of The HDF Group.
|
|
77
|
+
|
|
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|
+
All trademarks and registered trademarks are the property of their respective owners.
|
|
@@ -0,0 +1,56 @@
|
|
|
1
|
+
<!--
|
|
2
|
+
SPDX-FileCopyrightText: 2025 ProFACE developers
|
|
3
|
+
|
|
4
|
+
SPDX-License-Identifier: MIT
|
|
5
|
+
-->
|
|
6
|
+
|
|
7
|
+
# ProFACE-Abaqus-Pre
|
|
8
|
+
|
|
9
|
+
ProFACE-Abaqus-Pre is a python package that provides the `proface.preprocessor.abaqus` plugin for use with the [`proface-pre`](https://github.com/ProFACE-dev/proface-pre) command-line interface (CLI).
|
|
10
|
+
|
|
11
|
+
This plugin enables the conversion of Abaqus binary `.fil` results files to ProFACE `.h5` FEA input files.
|
|
12
|
+
|
|
13
|
+
## Installation
|
|
14
|
+
|
|
15
|
+
Install from <https://pypi.org> with
|
|
16
|
+
|
|
17
|
+
```
|
|
18
|
+
pip install proface-abaqus-pre
|
|
19
|
+
```
|
|
20
|
+
|
|
21
|
+
## Usage
|
|
22
|
+
|
|
23
|
+
Running
|
|
24
|
+
|
|
25
|
+
```
|
|
26
|
+
proface-pre example.toml
|
|
27
|
+
```
|
|
28
|
+
|
|
29
|
+
will produce `example.h5` from `example.fil`.
|
|
30
|
+
|
|
31
|
+
`example.toml` has the following format:
|
|
32
|
+
|
|
33
|
+
```toml
|
|
34
|
+
fea_software = "Abaqus"
|
|
35
|
+
|
|
36
|
+
[Abaqus.input]
|
|
37
|
+
fil = "example.fil" # optional if .toml and .fil have the same name
|
|
38
|
+
|
|
39
|
+
[Abaqus.results.ref_load]
|
|
40
|
+
step = 1 # 0 for last step
|
|
41
|
+
increment = 1 # 0 for last increment
|
|
42
|
+
```
|
|
43
|
+
|
|
44
|
+
## License
|
|
45
|
+
|
|
46
|
+
ProFACE-Abaqus-Pre is licensed under the MIT license.
|
|
47
|
+
ProFACE-Pre makes no claims about [ProFACE](https://proface.polimi.it) which is a distinct program with different licensing requirements.
|
|
48
|
+
|
|
49
|
+
### Disclaimer
|
|
50
|
+
|
|
51
|
+
This project is not affiliated with, endorsed by, or sponsored by Dassault Systèmes, The HDF Group, or any of their respective products.
|
|
52
|
+
|
|
53
|
+
- Abaqus is a registered trademark of Dassault Systèmes or its subsidiaries in the United States and/or other countries.
|
|
54
|
+
- HDF5 is a trademark of The HDF Group.
|
|
55
|
+
|
|
56
|
+
All trademarks and registered trademarks are the property of their respective owners.
|
|
@@ -0,0 +1,77 @@
|
|
|
1
|
+
# SPDX-FileCopyrightText: 2025 ProFACE developers
|
|
2
|
+
#
|
|
3
|
+
# SPDX-License-Identifier: MIT
|
|
4
|
+
|
|
5
|
+
[project]
|
|
6
|
+
dynamic = ["version"]
|
|
7
|
+
name = "proface-abaqus-pre"
|
|
8
|
+
description = "Abaqus to ProFACE preprocessor"
|
|
9
|
+
readme = "README.md"
|
|
10
|
+
authors = [
|
|
11
|
+
{ name = "Stefano Miccoli", email = "stefano.miccoli@polimi.it" }
|
|
12
|
+
]
|
|
13
|
+
mantainers = [
|
|
14
|
+
{ name = "ProFACE developers", email = "proface@polimi.it" }
|
|
15
|
+
]
|
|
16
|
+
classifiers = [
|
|
17
|
+
"Development Status :: 3 - Alpha",
|
|
18
|
+
"Environment :: Console",
|
|
19
|
+
"Programming Language :: Python",
|
|
20
|
+
"Programming Language :: Python :: 3.12",
|
|
21
|
+
"Programming Language :: Python :: 3.13",
|
|
22
|
+
"Programming Language :: Python :: Implementation :: CPython",
|
|
23
|
+
]
|
|
24
|
+
requires-python = ">=3.12"
|
|
25
|
+
dependencies = [
|
|
26
|
+
"proface-pre>=0.2.0",
|
|
27
|
+
"h5py>=3.13.0",
|
|
28
|
+
"numpy>=2.0",
|
|
29
|
+
"suanpan-abaqus>=0.1.0",
|
|
30
|
+
]
|
|
31
|
+
license = "MIT"
|
|
32
|
+
|
|
33
|
+
[project.entry-points."proface.preprocessor"]
|
|
34
|
+
abaqus = "proface.abaqus.preprocessor:main"
|
|
35
|
+
|
|
36
|
+
[project.urls]
|
|
37
|
+
documentation = "https://github.com/ProFACE-dev/proface-abaqus-pre#"
|
|
38
|
+
issues = "https://github.com/ProFACE-dev/proface-abaqus-pre/issues"
|
|
39
|
+
source = "https://github.com/ProFACE-dev/proface-abaqus-pre"
|
|
40
|
+
|
|
41
|
+
[build-system]
|
|
42
|
+
requires = ["hatchling", "hatch-vcs"]
|
|
43
|
+
build-backend = "hatchling.build"
|
|
44
|
+
|
|
45
|
+
#
|
|
46
|
+
# hatch
|
|
47
|
+
#
|
|
48
|
+
[tool.hatch.version]
|
|
49
|
+
source = "vcs"
|
|
50
|
+
[tool.hatch.version.raw-options]
|
|
51
|
+
version_scheme = "release-branch-semver"
|
|
52
|
+
local_scheme = "node-and-date"
|
|
53
|
+
[tool.hatch.build.hooks.vcs]
|
|
54
|
+
version-file = "src/proface/abaqus/preprocessor/_version.py"
|
|
55
|
+
[tool.hatch.build.targets.wheel]
|
|
56
|
+
packages = ["src/proface"]
|
|
57
|
+
|
|
58
|
+
#
|
|
59
|
+
# ruff
|
|
60
|
+
#
|
|
61
|
+
[tool.ruff]
|
|
62
|
+
line-length = 80
|
|
63
|
+
target-version = "py312"
|
|
64
|
+
|
|
65
|
+
[tool.ruff.lint]
|
|
66
|
+
select = ["A", "ARG", "B", "BLE", "C4", "C90", "COM818",
|
|
67
|
+
"E", "W", "EM", "F", "FA", "FBT", "FLY", "G", "I", "ICN",
|
|
68
|
+
"INP", "INT", "ISC", "N", "NPY", "PERF", "PGH", "PIE",
|
|
69
|
+
"PLE", "PLR", "PLW", "PT", "PYI", "RET", "RUF", "S",
|
|
70
|
+
"SIM", "SLF", "SLOT", "T10", "T20", "TCH", "TRY", "TID",
|
|
71
|
+
"UP", "YTT",
|
|
72
|
+
]
|
|
73
|
+
ignore = ["S101", "PT015", "B011", "TRY400"]
|
|
74
|
+
|
|
75
|
+
|
|
76
|
+
[tool.ruff.lint.isort]
|
|
77
|
+
known-first-party = ["proface"]
|
|
@@ -0,0 +1,10 @@
|
|
|
1
|
+
# SPDX-FileCopyrightText: 2025 ProFACE developers
|
|
2
|
+
#
|
|
3
|
+
# SPDX-License-Identifier: MIT
|
|
4
|
+
|
|
5
|
+
"""ProFACE Preprocessor package for Abaqus FEA"""
|
|
6
|
+
|
|
7
|
+
from ._version import __version__
|
|
8
|
+
from .translator import AbaqusTranslatorError, main
|
|
9
|
+
|
|
10
|
+
__all__ = ["AbaqusTranslatorError", "__version__", "main"]
|
|
@@ -0,0 +1,21 @@
|
|
|
1
|
+
# file generated by setuptools-scm
|
|
2
|
+
# don't change, don't track in version control
|
|
3
|
+
|
|
4
|
+
__all__ = ["__version__", "__version_tuple__", "version", "version_tuple"]
|
|
5
|
+
|
|
6
|
+
TYPE_CHECKING = False
|
|
7
|
+
if TYPE_CHECKING:
|
|
8
|
+
from typing import Tuple
|
|
9
|
+
from typing import Union
|
|
10
|
+
|
|
11
|
+
VERSION_TUPLE = Tuple[Union[int, str], ...]
|
|
12
|
+
else:
|
|
13
|
+
VERSION_TUPLE = object
|
|
14
|
+
|
|
15
|
+
version: str
|
|
16
|
+
__version__: str
|
|
17
|
+
__version_tuple__: VERSION_TUPLE
|
|
18
|
+
version_tuple: VERSION_TUPLE
|
|
19
|
+
|
|
20
|
+
__version__ = version = '0.1.0rc1'
|
|
21
|
+
__version_tuple__ = version_tuple = (0, 1, 0)
|
|
@@ -0,0 +1,337 @@
|
|
|
1
|
+
# SPDX-FileCopyrightText: 2025 ProFACE developers
|
|
2
|
+
#
|
|
3
|
+
# SPDX-License-Identifier: MIT
|
|
4
|
+
|
|
5
|
+
"""Translator implementation"""
|
|
6
|
+
|
|
7
|
+
import collections.abc
|
|
8
|
+
import logging
|
|
9
|
+
from pathlib import Path
|
|
10
|
+
|
|
11
|
+
import h5py
|
|
12
|
+
import numpy as np
|
|
13
|
+
from suanpan.abqfil import AbqFil
|
|
14
|
+
|
|
15
|
+
from proface.preprocessor import PreprocessorError
|
|
16
|
+
|
|
17
|
+
from . import __version__
|
|
18
|
+
|
|
19
|
+
logger = logging.getLogger(__name__)
|
|
20
|
+
|
|
21
|
+
|
|
22
|
+
# translation from Abaqus result codes to ProFACE ids
|
|
23
|
+
ABQ_VAR = {"R11": "S", "R401": "SP", "R76": "IVOL", "R8": "COORD"}
|
|
24
|
+
# translation from Abaqus location codes to ProFACE ids
|
|
25
|
+
ABQ_LOC = {0: "integration_point", 4: "nodal_averaged"}
|
|
26
|
+
|
|
27
|
+
# function for computing results path in h5
|
|
28
|
+
_h5_path = "{var:s}/{loc:s}/{eltype:s}".format
|
|
29
|
+
|
|
30
|
+
# save results in single precision
|
|
31
|
+
RES_DTYPE = np.dtype("float32")
|
|
32
|
+
|
|
33
|
+
|
|
34
|
+
class AbaqusTranslatorError(PreprocessorError):
|
|
35
|
+
pass
|
|
36
|
+
|
|
37
|
+
|
|
38
|
+
def main(
|
|
39
|
+
*, job: collections.abc.Mapping, job_path: Path, h5: h5py.Group
|
|
40
|
+
) -> None:
|
|
41
|
+
"""main entrypoint for abaqus preprocessor"""
|
|
42
|
+
|
|
43
|
+
# runtime type checking
|
|
44
|
+
if not isinstance(job, collections.abc.Mapping):
|
|
45
|
+
msg = "'job' must be a mapping"
|
|
46
|
+
raise TypeError(msg)
|
|
47
|
+
if not isinstance(job_path, Path):
|
|
48
|
+
msg = "'job_path' must be a pathlib.Path"
|
|
49
|
+
raise TypeError(msg)
|
|
50
|
+
if not isinstance(h5, h5py.Group):
|
|
51
|
+
msg = "'h5' must be a h5py.Group or h5py.File"
|
|
52
|
+
raise TypeError(msg)
|
|
53
|
+
|
|
54
|
+
logger.info(
|
|
55
|
+
"\U0001f680 START Abaqus to ProFACE translator, ver. %s",
|
|
56
|
+
__version__,
|
|
57
|
+
) # 🚀
|
|
58
|
+
|
|
59
|
+
# compute .fil path
|
|
60
|
+
if "fil" in job.get("input", {}):
|
|
61
|
+
filpth = job_path.parent / job["input"]["fil"]
|
|
62
|
+
else:
|
|
63
|
+
filpth = job_path.with_suffix(".fil")
|
|
64
|
+
|
|
65
|
+
# run translator
|
|
66
|
+
try:
|
|
67
|
+
_pre(filpth=filpth, h5=h5, results=job.get("results", {}))
|
|
68
|
+
except OSError:
|
|
69
|
+
# caller should treat OSError
|
|
70
|
+
raise
|
|
71
|
+
except Exception:
|
|
72
|
+
msg = "Internal Error"
|
|
73
|
+
logger.exception(msg)
|
|
74
|
+
raise AbaqusTranslatorError(msg) from None
|
|
75
|
+
logger.info("\U0001f3c1 END Abaqus to ProFACE translator") # 🏁
|
|
76
|
+
|
|
77
|
+
|
|
78
|
+
def _pre(filpth, h5: h5py.File, results):
|
|
79
|
+
"""Abaqus translator"""
|
|
80
|
+
|
|
81
|
+
logger.info("reading %s", filpth.resolve().as_uri())
|
|
82
|
+
logger.info("writing %s", Path(h5.filename).resolve().as_uri())
|
|
83
|
+
|
|
84
|
+
fil = AbqFil(filpth)
|
|
85
|
+
|
|
86
|
+
_write_meta(fil=fil, h5=h5)
|
|
87
|
+
_write_nodal(fil=fil, h5=h5)
|
|
88
|
+
_write_element(fil=fil, h5=h5)
|
|
89
|
+
_write_sets(fil=fil, h5=h5)
|
|
90
|
+
|
|
91
|
+
if not results:
|
|
92
|
+
logger.warning("no results request")
|
|
93
|
+
return
|
|
94
|
+
h5_res = h5.create_group("results")
|
|
95
|
+
for k, v in results.items():
|
|
96
|
+
if "step" not in v or "increment" not in v:
|
|
97
|
+
logger.error(
|
|
98
|
+
"Results request '%s': "
|
|
99
|
+
"both 'step' and 'increment' must be specified.",
|
|
100
|
+
k,
|
|
101
|
+
)
|
|
102
|
+
continue
|
|
103
|
+
_write_results(
|
|
104
|
+
fil=fil,
|
|
105
|
+
h5=h5,
|
|
106
|
+
h5_res=h5_res,
|
|
107
|
+
name=k,
|
|
108
|
+
step=v["step"],
|
|
109
|
+
inc=v["increment"],
|
|
110
|
+
)
|
|
111
|
+
|
|
112
|
+
|
|
113
|
+
def _write_meta(fil, h5):
|
|
114
|
+
#
|
|
115
|
+
# metadata
|
|
116
|
+
#
|
|
117
|
+
logger.info("Abaqus ver. %s", _label(fil.info["ver"]))
|
|
118
|
+
logger.info(
|
|
119
|
+
"Analysis run on %s",
|
|
120
|
+
_label(fil.info["date"]) + " " + _label(fil.info["time"]),
|
|
121
|
+
)
|
|
122
|
+
if fil.heading.strip():
|
|
123
|
+
logger.info("Heading '%s'", _label(fil.heading))
|
|
124
|
+
logger.info("Number of elements: %9d", fil.info["nelm"])
|
|
125
|
+
logger.info("Number of nodes : %9d", fil.info["nnod"])
|
|
126
|
+
|
|
127
|
+
h5.attrs["program"] = "Abaqus"
|
|
128
|
+
h5.attrs["version"] = _label(fil.info["ver"])
|
|
129
|
+
h5.attrs["run_datetime"] = (
|
|
130
|
+
_label(fil.info["date"]) + " " + _label(fil.info["time"])
|
|
131
|
+
)
|
|
132
|
+
h5.attrs["title"] = _label(fil.heading)
|
|
133
|
+
|
|
134
|
+
|
|
135
|
+
def _write_nodal(fil, h5):
|
|
136
|
+
#
|
|
137
|
+
# nodal data
|
|
138
|
+
#
|
|
139
|
+
h5_nodes = h5.create_group("nodes")
|
|
140
|
+
h5_nodes.attrs["number"] = fil.info["nnod"]
|
|
141
|
+
h5_nodes.create_dataset("coordinates", data=fil.coord["coord"])
|
|
142
|
+
h5_nodes.create_dataset("numbers", data=fil.coord["nnum"])
|
|
143
|
+
|
|
144
|
+
|
|
145
|
+
def _write_element(fil, h5):
|
|
146
|
+
#
|
|
147
|
+
# element data
|
|
148
|
+
#
|
|
149
|
+
h5_elements = h5.create_group("elements")
|
|
150
|
+
h5_elements.attrs["number"] = fil.info["nelm"]
|
|
151
|
+
h5_elements.attrs["size"] = fil.info["elsiz"]
|
|
152
|
+
for elbloc in fil.elm:
|
|
153
|
+
assert (elbloc["eltyp"] == elbloc["eltyp"][0]).all()
|
|
154
|
+
eltype = _safe_label(elbloc["eltyp"][0])
|
|
155
|
+
if eltype in h5_elements:
|
|
156
|
+
label_m = _mangle_element_label(eltype, h5_elements.keys())
|
|
157
|
+
logger.warning(
|
|
158
|
+
"Mapping %s \N{RIGHTWARDS ARROW FROM BAR} %s",
|
|
159
|
+
eltype,
|
|
160
|
+
label_m,
|
|
161
|
+
)
|
|
162
|
+
eltype = label_m
|
|
163
|
+
h5_elgroup = h5_elements.create_group(eltype)
|
|
164
|
+
h5_elgroup.create_dataset("incidences", data=elbloc["ninc"])
|
|
165
|
+
h5_elgroup.create_dataset("numbers", data=elbloc["elnum"])
|
|
166
|
+
|
|
167
|
+
h5_elgroup.create_dataset(
|
|
168
|
+
"nodes", data=np.unique(h5_elgroup["incidences"])
|
|
169
|
+
)
|
|
170
|
+
|
|
171
|
+
|
|
172
|
+
def _write_sets(fil, h5):
|
|
173
|
+
#
|
|
174
|
+
# sets
|
|
175
|
+
#
|
|
176
|
+
h5_sets = h5.create_group("sets")
|
|
177
|
+
h5_sets_node = h5_sets.create_group("node")
|
|
178
|
+
for k, nset in fil.nset.items():
|
|
179
|
+
k = _safe_label(fil.label.get(k, k)) # noqa: PLW2901
|
|
180
|
+
h5_sets_node.create_dataset(k, data=nset)
|
|
181
|
+
h5_sets_element = h5_sets.create_group("element")
|
|
182
|
+
for k, elset in fil.elset.items():
|
|
183
|
+
k = _safe_label(fil.label.get(k, k)) # noqa: PLW2901
|
|
184
|
+
h5_sets_element.create_dataset(k, data=elset)
|
|
185
|
+
|
|
186
|
+
|
|
187
|
+
def _write_results(fil, h5, h5_res, name: str, step: int, inc: int) -> None: # noqa: PLR0913
|
|
188
|
+
#
|
|
189
|
+
# results
|
|
190
|
+
#
|
|
191
|
+
try:
|
|
192
|
+
i = _find_step_inc(fil.step, step, inc)
|
|
193
|
+
except ValueError as exc:
|
|
194
|
+
logger.error("Results '%s': %s", name, exc)
|
|
195
|
+
## fixme: raise error ?
|
|
196
|
+
return
|
|
197
|
+
|
|
198
|
+
logger.info(
|
|
199
|
+
"Results '%s': step %d, increment %d, time %#.3g, '%s'",
|
|
200
|
+
name,
|
|
201
|
+
*fil.step[i][["step", "incr", "ttime"]],
|
|
202
|
+
_label(fil.step[i]["subheading"]),
|
|
203
|
+
)
|
|
204
|
+
h5_k = h5_res.create_group(name)
|
|
205
|
+
h5_k.attrs["step"] = fil.step[i]["step"]
|
|
206
|
+
h5_k.attrs["increment"] = fil.step[i]["incr"]
|
|
207
|
+
h5_k.attrs["time"] = fil.step[i]["ttime"]
|
|
208
|
+
|
|
209
|
+
_write_step_output_blocks(fil, h5, h5_k, i)
|
|
210
|
+
|
|
211
|
+
|
|
212
|
+
def _write_step_output_blocks(fil, h5, h5_k, i): # noqa: C901
|
|
213
|
+
for flag, elset, eltype, data in fil.get_step(i):
|
|
214
|
+
# check block flag: 0 is element output
|
|
215
|
+
if flag != 0:
|
|
216
|
+
logger.warning("Skipping non element output: flag = %d", flag)
|
|
217
|
+
continue
|
|
218
|
+
|
|
219
|
+
# check block elset
|
|
220
|
+
if _label(elset) != "":
|
|
221
|
+
logger.error("Results file with element sets not supported")
|
|
222
|
+
continue
|
|
223
|
+
|
|
224
|
+
# check block element type
|
|
225
|
+
eltype = _safe_label(eltype) # noqa: PLW2901
|
|
226
|
+
if not eltype.startswith("C3D"):
|
|
227
|
+
logger.warning("Results for element %s ignored", eltype)
|
|
228
|
+
continue
|
|
229
|
+
|
|
230
|
+
# check block location
|
|
231
|
+
loc = data["loc"][0]
|
|
232
|
+
assert (data["loc"] == loc).all()
|
|
233
|
+
match ABQ_LOC.get(loc):
|
|
234
|
+
case "integration_point":
|
|
235
|
+
# reshape data to index as [el_num, ip_num]
|
|
236
|
+
nr_ip = _guess_nr_ip(data)
|
|
237
|
+
data = data.reshape(-1, nr_ip) # noqa: PLW2901
|
|
238
|
+
# data["num"] is elnum across columns
|
|
239
|
+
if not np.all(
|
|
240
|
+
data["num"]
|
|
241
|
+
== np.expand_dims(h5["elements"][eltype]["numbers"], -1)
|
|
242
|
+
):
|
|
243
|
+
msg = f"Inconsistent records for {eltype}: element numbers"
|
|
244
|
+
raise ValueError(msg)
|
|
245
|
+
# data["ipnum"] is 1..nr_ip across rows
|
|
246
|
+
assert np.all(data["ipnum"] == 1 + np.arange(nr_ip))
|
|
247
|
+
case "nodal_averaged":
|
|
248
|
+
if not np.all(data["num"] == h5["elements"][eltype]["nodes"]):
|
|
249
|
+
msg = f"Inconsistent records for {eltype}: node numbers"
|
|
250
|
+
assert (data["ipnum"] == 0).all()
|
|
251
|
+
case None:
|
|
252
|
+
logger.warning("Unknown location code %d", loc)
|
|
253
|
+
continue
|
|
254
|
+
|
|
255
|
+
# save block data
|
|
256
|
+
for name in data.dtype.names:
|
|
257
|
+
if not name.startswith("R"):
|
|
258
|
+
continue
|
|
259
|
+
if name not in ABQ_VAR:
|
|
260
|
+
logger.warning("Unexpected results code %s", name)
|
|
261
|
+
continue
|
|
262
|
+
dset = h5_k.create_dataset(
|
|
263
|
+
_h5_path(var=ABQ_VAR[name], loc=ABQ_LOC[loc], eltype=eltype),
|
|
264
|
+
data=data[name].astype(RES_DTYPE),
|
|
265
|
+
)
|
|
266
|
+
logger.debug("Wrote %s: %s", dset.name, dset.shape)
|
|
267
|
+
|
|
268
|
+
|
|
269
|
+
def _label(lab: bytes) -> str:
|
|
270
|
+
return lab.decode("ASCII").strip()
|
|
271
|
+
|
|
272
|
+
|
|
273
|
+
def _safe_label(lab: bytes) -> str:
|
|
274
|
+
slabel = _label(lab)
|
|
275
|
+
if slabel == ".":
|
|
276
|
+
return "._"
|
|
277
|
+
return slabel.replace("/", "|")
|
|
278
|
+
|
|
279
|
+
|
|
280
|
+
def _mangle_element_label(label: str, groups) -> str:
|
|
281
|
+
assert label in groups
|
|
282
|
+
i = 1
|
|
283
|
+
for s in groups:
|
|
284
|
+
if s.startswith(f"{label:s}@"):
|
|
285
|
+
i += 1
|
|
286
|
+
mangled = f"{label:2}@{i:d}"
|
|
287
|
+
assert mangled not in groups
|
|
288
|
+
return mangled
|
|
289
|
+
|
|
290
|
+
|
|
291
|
+
def _find_step_inc(stepdata, step, inc):
|
|
292
|
+
"""search for requested step/increment"""
|
|
293
|
+
|
|
294
|
+
if len(stepdata) == 0:
|
|
295
|
+
msg = "no stepdata in file"
|
|
296
|
+
raise ValueError(msg)
|
|
297
|
+
logger.debug("Requested: Step %d, increment %d", step, inc)
|
|
298
|
+
if step > 0 and step not in stepdata["step"]:
|
|
299
|
+
# explicit request of inesistent step
|
|
300
|
+
msg = f"step '{step}' not found"
|
|
301
|
+
raise ValueError(msg)
|
|
302
|
+
if step == 0:
|
|
303
|
+
# last step requested
|
|
304
|
+
step = stepdata["step"][-1]
|
|
305
|
+
|
|
306
|
+
c_step = stepdata[stepdata["step"] == step]
|
|
307
|
+
if inc > 0 and inc not in c_step["incr"]:
|
|
308
|
+
# explicit request for inesistent increment
|
|
309
|
+
msg = f"increment '{inc}' not found in step '{step}'"
|
|
310
|
+
raise ValueError(msg)
|
|
311
|
+
if inc == 0:
|
|
312
|
+
# last increment requested
|
|
313
|
+
inc = c_step["incr"][-1]
|
|
314
|
+
|
|
315
|
+
assert stepdata.ndim == 1
|
|
316
|
+
(i,) = np.nonzero((stepdata["step"] == step) & (stepdata["incr"] == inc))
|
|
317
|
+
assert np.shape(i) == (1,), f"Multiple step blocks found: {i}"
|
|
318
|
+
i = i.item()
|
|
319
|
+
|
|
320
|
+
logger.debug("Found: Step %d, increment %d at position %s", step, inc, i)
|
|
321
|
+
assert stepdata[i][["step", "incr"]].item() == (step, inc)
|
|
322
|
+
return i
|
|
323
|
+
|
|
324
|
+
|
|
325
|
+
def _guess_nr_ip(data):
|
|
326
|
+
"""heuristics to find the number of integration points
|
|
327
|
+
for a loc 0 (integration points) record"""
|
|
328
|
+
|
|
329
|
+
# assumption is that number of ip's is smallish
|
|
330
|
+
num = data["num"]
|
|
331
|
+
for i, v in enumerate(num):
|
|
332
|
+
if v != num[0]:
|
|
333
|
+
return i
|
|
334
|
+
|
|
335
|
+
# edge case: record contains a single element
|
|
336
|
+
assert np.all(num == num[0])
|
|
337
|
+
return len(data)
|