prodigy-ppl 0.1.0__tar.gz

prodigy_ppl-0.1.0/.gitignore

@@ -0,0 +1,152 @@
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+testreport.xml
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+.python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# VSCode
+.vscode
+
+# JetBrains
+.idea
+
+# Poetry
+poetry.lock
+
+# Benchmark script
+*.csv
+*.txt
+*.md
+!README.md
+!CLAUDE.md
+!docs/*.md
+!prodigy/web/frontend/README.md
+
+# Web GUI: npm packages for rebuilding the vendored libraries
+prodigy/web/frontend/node_modules/
+

prodigy_ppl-0.1.0/LICENSE

@@ -0,0 +1,201 @@
+                                 Apache License
+                           Version 2.0, January 2004
+                        http://www.apache.org/licenses/
+
+   TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+   1. Definitions.
+
+      "License" shall mean the terms and conditions for use, reproduction,
+      and distribution as defined by Sections 1 through 9 of this document.
+
+      "Licensor" shall mean the copyright owner or entity authorized by
+      the copyright owner that is granting the License.
+
+      "Legal Entity" shall mean the union of the acting entity and all
+      other entities that control, are controlled by, or are under common
+      control with that entity. For the purposes of this definition,
+      "control" means (i) the power, direct or indirect, to cause the
+      direction or management of such entity, whether by contract or
+      otherwise, or (ii) ownership of fifty percent (50%) or more of the
+      outstanding shares, or (iii) beneficial ownership of such entity.
+
+      "You" (or "Your") shall mean an individual or Legal Entity
+      exercising permissions granted by this License.
+
+      "Source" form shall mean the preferred form for making modifications,
+      including but not limited to software source code, documentation
+      source, and configuration files.
+
+      "Object" form shall mean any form resulting from mechanical
+      transformation or translation of a Source form, including but
+      not limited to compiled object code, generated documentation,
+      and conversions to other media types.
+
+      "Work" shall mean the work of authorship, whether in Source or
+      Object form, made available under the License, as indicated by a
+      copyright notice that is included in or attached to the work
+      (an example is provided in the Appendix below).
+
+      "Derivative Works" shall mean any work, whether in Source or Object
+      form, that is based on (or derived from) the Work and for which the
+      editorial revisions, annotations, elaborations, or other modifications
+      represent, as a whole, an original work of authorship. For the purposes
+      of this License, Derivative Works shall not include works that remain
+      separable from, or merely link (or bind by name) to the interfaces of,
+      the Work and Derivative Works thereof.
+
+      "Contribution" shall mean any work of authorship, including
+      the original version of the Work and any modifications or additions
+      to that Work or Derivative Works thereof, that is intentionally
+      submitted to Licensor for inclusion in the Work by the copyright owner
+      or by an individual or Legal Entity authorized to submit on behalf of
+      the copyright owner. For the purposes of this definition, "submitted"
+      means any form of electronic, verbal, or written communication sent
+      to the Licensor or its representatives, including but not limited to
+      communication on electronic mailing lists, source code control systems,
+      and issue tracking systems that are managed by, or on behalf of, the
+      Licensor for the purpose of discussing and improving the Work, but
+      excluding communication that is conspicuously marked or otherwise
+      designated in writing by the copyright owner as "Not a Contribution."
+
+      "Contributor" shall mean Licensor and any individual or Legal Entity
+      on behalf of whom a Contribution has been received by Licensor and
+      subsequently incorporated within the Work.
+
+   2. Grant of Copyright License. Subject to the terms and conditions of
+      this License, each Contributor hereby grants to You a perpetual,
+      worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+      copyright license to reproduce, prepare Derivative Works of,
+      publicly display, publicly perform, sublicense, and distribute the
+      Work and such Derivative Works in Source or Object form.
+
+   3. Grant of Patent License. Subject to the terms and conditions of
+      this License, each Contributor hereby grants to You a perpetual,
+      worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+      (except as stated in this section) patent license to make, have made,
+      use, offer to sell, sell, import, and otherwise transfer the Work,
+      where such license applies only to those patent claims licensable
+      by such Contributor that are necessarily infringed by their
+      Contribution(s) alone or by combination of their Contribution(s)
+      with the Work to which such Contribution(s) was submitted. If You
+      institute patent litigation against any entity (including a
+      cross-claim or counterclaim in a lawsuit) alleging that the Work
+      or a Contribution incorporated within the Work constitutes direct
+      or contributory patent infringement, then any patent licenses
+      granted to You under this License for that Work shall terminate
+      as of the date such litigation is filed.
+
+   4. Redistribution. You may reproduce and distribute copies of the
+      Work or Derivative Works thereof in any medium, with or without
+      modifications, and in Source or Object form, provided that You
+      meet the following conditions:
+
+      (a) You must give any other recipients of the Work or
+          Derivative Works a copy of this License; and
+
+      (b) You must cause any modified files to carry prominent notices
+          stating that You changed the files; and
+
+      (c) You must retain, in the Source form of any Derivative Works
+          that You distribute, all copyright, patent, trademark, and
+          attribution notices from the Source form of the Work,
+          excluding those notices that do not pertain to any part of
+          the Derivative Works; and
+
+      (d) If the Work includes a "NOTICE" text file as part of its
+          distribution, then any Derivative Works that You distribute must
+          include a readable copy of the attribution notices contained
+          within such NOTICE file, excluding those notices that do not
+          pertain to any part of the Derivative Works, in at least one
+          of the following places: within a NOTICE text file distributed
+          as part of the Derivative Works; within the Source form or
+          documentation, if provided along with the Derivative Works; or,
+          within a display generated by the Derivative Works, if and
+          wherever such third-party notices normally appear. The contents
+          of the NOTICE file are for informational purposes only and
+          do not modify the License. You may add Your own attribution
+          notices within Derivative Works that You distribute, alongside
+          or as an addendum to the NOTICE text from the Work, provided
+          that such additional attribution notices cannot be construed
+          as modifying the License.
+
+      You may add Your own copyright statement to Your modifications and
+      may provide additional or different license terms and conditions
+      for use, reproduction, or distribution of Your modifications, or
+      for any such Derivative Works as a whole, provided Your use,
+      reproduction, and distribution of the Work otherwise complies with
+      the conditions stated in this License.
+
+   5. Submission of Contributions. Unless You explicitly state otherwise,
+      any Contribution intentionally submitted for inclusion in the Work
+      by You to the Licensor shall be under the terms and conditions of
+      this License, without any additional terms or conditions.
+      Notwithstanding the above, nothing herein shall supersede or modify
+      the terms of any separate license agreement you may have executed
+      with Licensor regarding such Contributions.
+
+   6. Trademarks. This License does not grant permission to use the trade
+      names, trademarks, service marks, or product names of the Licensor,
+      except as required for reasonable and customary use in describing the
+      origin of the Work and reproducing the content of the NOTICE file.
+
+   7. Disclaimer of Warranty. Unless required by applicable law or
+      agreed to in writing, Licensor provides the Work (and each
+      Contributor provides its Contributions) on an "AS IS" BASIS,
+      WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
+      implied, including, without limitation, any warranties or conditions
+      of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
+      PARTICULAR PURPOSE. You are solely responsible for determining the
+      appropriateness of using or redistributing the Work and assume any
+      risks associated with Your exercise of permissions under this License.
+
+   8. Limitation of Liability. In no event and under no legal theory,
+      whether in tort (including negligence), contract, or otherwise,
+      unless required by applicable law (such as deliberate and grossly
+      negligent acts) or agreed to in writing, shall any Contributor be
+      liable to You for damages, including any direct, indirect, special,
+      incidental, or consequential damages of any character arising as a
+      result of this License or out of the use or inability to use the
+      Work (including but not limited to damages for loss of goodwill,
+      work stoppage, computer failure or malfunction, or any and all
+      other commercial damages or losses), even if such Contributor
+      has been advised of the possibility of such damages.
+
+   9. Accepting Warranty or Additional Liability. While redistributing
+      the Work or Derivative Works thereof, You may choose to offer,
+      and charge a fee for, acceptance of support, warranty, indemnity,
+      or other liability obligations and/or rights consistent with this
+      License. However, in accepting such obligations, You may act only
+      on Your own behalf and on Your sole responsibility, not on behalf
+      of any other Contributor, and only if You agree to indemnify,
+      defend, and hold each Contributor harmless for any liability
+      incurred by, or claims asserted against, such Contributor by reason
+      of your accepting any such warranty or additional liability.
+
+   END OF TERMS AND CONDITIONS
+
+   APPENDIX: How to apply the Apache License to your work.
+
+      To apply the Apache License to your work, attach the following
+      boilerplate notice, with the fields enclosed by brackets "[]"
+      replaced with your own identifying information. (Don't include
+      the brackets!)  The text should be enclosed in the appropriate
+      comment syntax for the file format. We also recommend that a
+      file or class name and description of purpose be included on the
+      same "printed page" as the copyright notice for easier
+      identification within third-party archives.
+
+   Copyright [2022] [Lutz Klinkenberg]
+
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
+
+       http://www.apache.org/licenses/LICENSE-2.0
+
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.

prodigy_ppl-0.1.0/PKG-INFO

@@ -0,0 +1,120 @@
+Metadata-Version: 2.5
+Name: prodigy-ppl
+Version: 0.1.0
+Summary: PRObability DIstributions via GeneratingfunctionologY: analysis of probabilistic programs with generating functions
+Project-URL: Repository, https://github.com/LKlinke/Prodigy
+Author-email: Lutz Klinkenberg <lutz.klinkenberg@cs.rwth-aachen.de>
+License-File: LICENSE
+Requires-Python: >=3.11
+Requires-Dist: algebraic-data-types<0.3,>=0.1.3
+Requires-Dist: attrs>=19.3.0
+Requires-Dist: click<9,>=8.1
+Requires-Dist: flask<4,>=3.0
+Requires-Dist: frozendict<3,>=2.3
+Requires-Dist: lark<2,>=1.2
+Requires-Dist: matplotlib<4,>=3.4.2
+Requires-Dist: networkx<4,>=3.2
+Requires-Dist: numpy>=1.26
+Requires-Dist: pysmt<0.10,>=0.9.0
+Requires-Dist: python-flint>=0.6
+Requires-Dist: scipy>=1.11
+Requires-Dist: setuptools<85,>=76.0.0
+Requires-Dist: symengine<0.15,>=0.14.0
+Requires-Dist: sympy<2,>=1.8
+Provides-Extra: ginac
+Requires-Dist: pygin>=1.0; extra == 'ginac'
+Description-Content-Type: text/markdown
+
+# prodigy: PRObability DIstributions via GeneratingfunctionologY
+
+prodigy is a prototypical tool for the analysis of probabilistic non-negative integer programs with `while`-loops. It is based on (probability) generating functions.
+
+It provides a command-line interface and a web GUI.
+
+## Contents
+
+1. Installation
+2. Basic Usage
+
+
+## Installation
+
+### With pip
+
+Prodigy is on PyPI as `prodigy-ppl` (the command and the Python package are called `prodigy`):
+
+```bash
+pip install prodigy-ppl
+```
+
+This needs Python 3.11 or newer and uses the SymPy and SymEngine engines. For the faster GiNaC engine (`--engine ginac`),
+install [GiNaC](https://www.ginac.de/Download.html) and its Python bindings first (they are not on PyPI), then the extra:
+
+```bash
+pip install "pygin @ git+https://github.com/LKlinke/prodigy-ginac-bindings.git@dynamic-variables"
+pip install "prodigy-ppl[ginac]"
+```
+
+### With Docker
+
+The image contains the command line and the web GUI with the SymPy and SymEngine engines, for amd64 and arm64
+(tags: version, e.g. `3.1.0`, minor version `3.1`, and `latest`). Without arguments it starts the web GUI on
+http://localhost:8080:
+
+```bash
+docker run --rm -p 8080:8080 ghcr.io/lklinke/prodigy
+```
+
+Arguments are passed to `prodigy`; mount the folder with your programs to use the command line:
+
+```bash
+docker run --rm -v "$PWD":/work ghcr.io/lklinke/prodigy main /work/example.pgcl
+```
+
+`Dockerfile.artifact` builds the full environment for artifacts (all engines including GiNaC, the sources and
+the development tools): `make docker-artifact`, then `docker run -ti prodigy-artifact`.
+
+### From source
+
+To install Prodigy from the repository, follow these steps:
+
+1. Make sure [Python](https://www.python.org/downloads/) 3.11 or newer is installed (tested with 3.11 and 3.14).
+2. Install [GiNaC](https://www.ginac.de/Download.html), which also requires [CLN](https://www.ginac.de/CLN/).
+3. Install [uv](https://docs.astral.sh/uv/getting-started/installation/).
+4. Clone or download the Prodigy repository, open a command prompt in its root folder, and type `./install.sh`. This installs Prodigy with the dependency versions locked in `uv.lock` into `.venv`, and the Z3 solver for pysmt.
+
+If no errors occurred, you have successfully installed Prodigy.
+Now there are two options on how to use the tool. You can either use the command-line interface (CLI) or the web GUI. The next section (_Basic Usage_) details how to achieve both of these things.
+
+### Troubleshooting
+
+If you run into trouble during installation, this subsection might be of help. It lists some common problems that might occur during installation of Prodigy and how you can (hopefully) solve them.
+
+- If you're using Windows, don't (not even WSL). We heavily recommend using either Linux or MacOS, as some of the required libraries have compatibility problems with Windows.
+- If you're using Linux, make sure all of these packages are installed (if you're not using a Debian/Ubuntu based distribution, these might differ slightly):
+  - `CMake`
+  - `pkg-config`
+  - `build-essential` (includes `make`, `g++`, `gcc`, and more)
+  - `python3-dev` (called `python3-devel` on some other package managers such as `yam`) 
+
+## Basic Usage
+### CLI
+
+1. In the project directory, run prodigy with ``uv run prodigy ...`` (or activate the virtual environment with ``source .venv/bin/activate`` and type ``prodigy ...``).
+2. For more information, see the help message (``uv run prodigy --help``) or have a look into the documentation.
+
+
+### Web GUI
+1. Type ``uv run prodigy web`` (or ``uv run prodigy --engine ginac web`` for the faster GiNaC engine). The GUI opens in your browser.
+2. Write or load a program, choose a strategy for each loop under *Setup*, and press *Analyze* (⌘/Ctrl + Return).
+
+Results come with their guarantee (exact, lower bound with residual mass, upper bound), and
+queries are answered with sound intervals. See [docs/gui.md](docs/gui.md), which also
+describes the non-interactive analysis API (`prodigy analyze --json`).
+
+## Development
+
+- `make lint`, `make mypy` and `make test` run the checks of the CI (pylint, mypy, and the tests with coverage; see `.github/workflows/main.yml`).
+- `uv sync` installs pygin (GiNaC) from GitHub through the dependency group `ginac`; the package on PyPI does not depend on it.
+- Releases: bump `version` in `pyproject.toml`, merge, and push a tag `v<version>` (e.g. `v3.1.0`). `.github/workflows/release.yml` runs the checks, waits for approval in the environment `release`, and publishes to PyPI, the Docker image (`Dockerfile`) to ghcr.io, and a GitHub release.
+- Dependencies are locked in `uv.lock`. After changing them in `pyproject.toml`, run `uv lock` and commit both files. `uv lock --upgrade` updates all dependencies within their constraints; Dependabot proposes such updates monthly as pull requests.

prodigy_ppl-0.1.0/README.md

@@ -0,0 +1,93 @@
+# prodigy: PRObability DIstributions via GeneratingfunctionologY
+
+prodigy is a prototypical tool for the analysis of probabilistic non-negative integer programs with `while`-loops. It is based on (probability) generating functions.
+
+It provides a command-line interface and a web GUI.
+
+## Contents
+
+1. Installation
+2. Basic Usage
+
+
+## Installation
+
+### With pip
+
+Prodigy is on PyPI as `prodigy-ppl` (the command and the Python package are called `prodigy`):
+
+```bash
+pip install prodigy-ppl
+```
+
+This needs Python 3.11 or newer and uses the SymPy and SymEngine engines. For the faster GiNaC engine (`--engine ginac`),
+install [GiNaC](https://www.ginac.de/Download.html) and its Python bindings first (they are not on PyPI), then the extra:
+
+```bash
+pip install "pygin @ git+https://github.com/LKlinke/prodigy-ginac-bindings.git@dynamic-variables"
+pip install "prodigy-ppl[ginac]"
+```
+
+### With Docker
+
+The image contains the command line and the web GUI with the SymPy and SymEngine engines, for amd64 and arm64
+(tags: version, e.g. `3.1.0`, minor version `3.1`, and `latest`). Without arguments it starts the web GUI on
+http://localhost:8080:
+
+```bash
+docker run --rm -p 8080:8080 ghcr.io/lklinke/prodigy
+```
+
+Arguments are passed to `prodigy`; mount the folder with your programs to use the command line:
+
+```bash
+docker run --rm -v "$PWD":/work ghcr.io/lklinke/prodigy main /work/example.pgcl
+```
+
+`Dockerfile.artifact` builds the full environment for artifacts (all engines including GiNaC, the sources and
+the development tools): `make docker-artifact`, then `docker run -ti prodigy-artifact`.
+
+### From source
+
+To install Prodigy from the repository, follow these steps:
+
+1. Make sure [Python](https://www.python.org/downloads/) 3.11 or newer is installed (tested with 3.11 and 3.14).
+2. Install [GiNaC](https://www.ginac.de/Download.html), which also requires [CLN](https://www.ginac.de/CLN/).
+3. Install [uv](https://docs.astral.sh/uv/getting-started/installation/).
+4. Clone or download the Prodigy repository, open a command prompt in its root folder, and type `./install.sh`. This installs Prodigy with the dependency versions locked in `uv.lock` into `.venv`, and the Z3 solver for pysmt.
+
+If no errors occurred, you have successfully installed Prodigy.
+Now there are two options on how to use the tool. You can either use the command-line interface (CLI) or the web GUI. The next section (_Basic Usage_) details how to achieve both of these things.
+
+### Troubleshooting
+
+If you run into trouble during installation, this subsection might be of help. It lists some common problems that might occur during installation of Prodigy and how you can (hopefully) solve them.
+
+- If you're using Windows, don't (not even WSL). We heavily recommend using either Linux or MacOS, as some of the required libraries have compatibility problems with Windows.
+- If you're using Linux, make sure all of these packages are installed (if you're not using a Debian/Ubuntu based distribution, these might differ slightly):
+  - `CMake`
+  - `pkg-config`
+  - `build-essential` (includes `make`, `g++`, `gcc`, and more)
+  - `python3-dev` (called `python3-devel` on some other package managers such as `yam`) 
+
+## Basic Usage
+### CLI
+
+1. In the project directory, run prodigy with ``uv run prodigy ...`` (or activate the virtual environment with ``source .venv/bin/activate`` and type ``prodigy ...``).
+2. For more information, see the help message (``uv run prodigy --help``) or have a look into the documentation.
+
+
+### Web GUI
+1. Type ``uv run prodigy web`` (or ``uv run prodigy --engine ginac web`` for the faster GiNaC engine). The GUI opens in your browser.
+2. Write or load a program, choose a strategy for each loop under *Setup*, and press *Analyze* (⌘/Ctrl + Return).
+
+Results come with their guarantee (exact, lower bound with residual mass, upper bound), and
+queries are answered with sound intervals. See [docs/gui.md](docs/gui.md), which also
+describes the non-interactive analysis API (`prodigy analyze --json`).
+
+## Development
+
+- `make lint`, `make mypy` and `make test` run the checks of the CI (pylint, mypy, and the tests with coverage; see `.github/workflows/main.yml`).
+- `uv sync` installs pygin (GiNaC) from GitHub through the dependency group `ginac`; the package on PyPI does not depend on it.
+- Releases: bump `version` in `pyproject.toml`, merge, and push a tag `v<version>` (e.g. `v3.1.0`). `.github/workflows/release.yml` runs the checks, waits for approval in the environment `release`, and publishes to PyPI, the Docker image (`Dockerfile`) to ghcr.io, and a GitHub release.
+- Dependencies are locked in `uv.lock`. After changing them in `pyproject.toml`, run `uv lock` and commit both files. `uv lock --upgrade` updates all dependencies within their constraints; Dependabot proposes such updates monthly as pull requests.

prodigy_ppl-0.1.0/pgfexamples/README.md

@@ -0,0 +1,48 @@
+# Examples
+
+The examples are structured as follows:
+
+```
+pgfexamples/
+├── equivalence                     # Equivalence of two programs
+│   ├── loop_free                   # Programs without loops and their counterparts
+│   └── loopy                       # Programs with loops
+│       └── invariants              # ... and their loop-free counterpart
+├── independence                    # Checks for independent variables
+├── inference                       # Calculation of posterior distribution
+│   ├── loop_free                   # ... without while-loops
+│   │   └── conditioning            # ... with observe-statements
+│   └── loopy                       # ... with while-loops
+│       └── conditioning            # ... with observe-statements 
+├── invariant_synthesis             # Synthesis of (expected visiting time) invariants
+└── template_parameter_synthesis    # Equality of loopy and loop-free programs with parameters
+    └── invariants                  # Corresponding loop-free programs
+```
+
+## File structure
+
+* Files have a comment in the first line indicating which arguments should be used in order to execute it
+
+> ```bash
+>python prodigy/cli.py METHOD FILE ARGS 
+>```
+> results in
+>```
+># METHOD FILE ARGS
+>```
+> in the first line of the corresponding program or just
+> ```
+> # skip
+> ```
+> if the file should not be automatically tested.
+
+* Naming convention:
+    * In `pgfexamples/equivalence/loop_free` the files are named `file_name.pgcl` for the first and
+      `file_name2.pgcl` for the second program
+    * In `pgfexamples/equivalence/loopy` and `pgfexamples/template_parameter_synthesis` the files are named
+      `file_name.pgcl` in the main folder and their corresponding invariants with `file_name_invariant.pgcl` in the
+      invariants folder
+    * If there are multiple invariant files for one program, e.g. for a nested loop, the invariants are to be marked
+      with numbers indicating the order they should be used (i.e. the invariant for the outer-most while loop has number
+      1 and so on)
+    * Invariants and second programs are to be marked with `skip`

prodigy_ppl-0.1.0/pgfexamples/equivalence/loop_free/bernoulli.pgcl

@@ -0,0 +1,4 @@
+# check_equality pgfexamples/equivalence/loop_free/bernoulli.pgcl pgfexamples/equivalence/loop_free/bernoulli2.pgcl
+nat x;
+
+{ x := 0 } [1/3] { x := 1 }

prodigy_ppl-0.1.0/pgfexamples/equivalence/loop_free/bernoulli2.pgcl

@@ -0,0 +1,4 @@
+# skip
+nat x;
+
+x := bernoulli(2/3);

prodigy_ppl-0.1.0/pgfexamples/equivalence/loop_free/dice_sampling.pgcl

@@ -0,0 +1,9 @@
+# check_equality pgfexamples/equivalence/loop_free/dice_sampling.pgcl pgfexamples/equivalence/loop_free/dice_sampling2.pgcl
+nat dice;
+nat tmp;
+
+tmp := 0;
+
+# Roll a dice
+dice := unif(1,6);
+

prodigy_ppl-0.1.0/pgfexamples/equivalence/loop_free/dice_sampling2.pgcl

@@ -0,0 +1,11 @@
+# skip
+nat dice;
+nat tmp;
+
+# Roll a three-sided dice
+tmp := unif(1,3);
+
+# Flip a coin, leave or increase by 3
+{ dice := tmp; } [1/2] { dice := tmp + 3; }
+
+tmp := 0;

prodigy_ppl-0.1.0/pgfexamples/equivalence/loop_free/uniform_sampling.pgcl

@@ -0,0 +1,4 @@
+# check_equality pgfexamples/equivalence/loop_free/uniform_sampling.pgcl pgfexamples/equivalence/loop_free/uniform_sampling2.pgcl
+nat x
+
+x := unif(1,6)

prodigy_ppl-0.1.0/pgfexamples/equivalence/loop_free/uniform_sampling2.pgcl

@@ -0,0 +1,12 @@
+# skip
+nat x
+
+{x:=1}[1/6]{
+    {x:=2}[1/5]{
+        {x:=3}[1/4]{
+            {x:=4}[1/3]{
+                {x:=5}[1/2]{x:=6}
+            }
+        }
+    }
+}

prodigy_ppl-0.1.0/pgfexamples/equivalence/loopy/17_die_even.pgcl

@@ -0,0 +1,11 @@
+# check_equality pgfexamples/equivalence/loopy/17_die_even.pgcl pgfexamples/equivalence/loopy/invariants/17_die_even_invariant.pgcl
+nat c
+nat x
+nat temp
+
+while (x < 6) {
+    x := unif(1,6)
+    c := c + 1
+    observe(x % 2 = 0)
+    temp := 0
+}