process-bigraph 0.0.41__tar.gz → 0.0.42__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (35) hide show
  1. {process-bigraph-0.0.41/process_bigraph.egg-info → process-bigraph-0.0.42}/PKG-INFO +2 -2
  2. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/README.md +1 -1
  3. process-bigraph-0.0.42/process_bigraph/composite.py +1694 -0
  4. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/emitter.py +94 -198
  5. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/tests.py +119 -1
  6. {process-bigraph-0.0.41 → process-bigraph-0.0.42/process_bigraph.egg-info}/PKG-INFO +2 -2
  7. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/pyproject.toml +3 -2
  8. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/setup.py +1 -1
  9. process-bigraph-0.0.41/process_bigraph/composite.py +0 -1320
  10. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/.github/workflows/notebook_to_html.yml +0 -0
  11. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/.github/workflows/pytest.yml +0 -0
  12. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/.gitignore +0 -0
  13. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/AUTHORS.md +0 -0
  14. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/CLA.md +0 -0
  15. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/CODE_OF_CONDUCT.md +0 -0
  16. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/CONTRIBUTING.md +0 -0
  17. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/LICENSE +0 -0
  18. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/doc/_static/process-bigraph.png +0 -0
  19. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/notebooks/process-bigraphs.ipynb +0 -0
  20. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/notebooks/visualize_processes.ipynb +0 -0
  21. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/__init__.py +0 -0
  22. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/experiments/__init__.py +0 -0
  23. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/experiments/minimal_gillespie.py +0 -0
  24. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/process_types.py +0 -0
  25. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/processes/__init__.py +0 -0
  26. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/processes/growth_division.py +0 -0
  27. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/processes/parameter_scan.py +0 -0
  28. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph/protocols.py +0 -0
  29. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph.egg-info/SOURCES.txt +0 -0
  30. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph.egg-info/dependency_links.txt +0 -0
  31. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph.egg-info/requires.txt +0 -0
  32. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/process_bigraph.egg-info/top_level.txt +0 -0
  33. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/pytest.ini +0 -0
  34. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/release.sh +0 -0
  35. {process-bigraph-0.0.41 → process-bigraph-0.0.42}/setup.cfg +0 -0
{process-bigraph-0.0.41/process_bigraph.egg-info → process-bigraph-0.0.42}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: process-bigraph
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- Version: 0.0.41
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+ Version: 0.0.42
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  Home-page: https://github.com/vivarium-collective/process-bigraph
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  Author: Ryan Spangler, Eran Agmon
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  Author-email: ryan.spangler@gmail.com, agmon.eran@gmail.com
@@ -69,4 +69,4 @@ diagraph of a whole-cell E. coli model.
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  ## License
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- Bigraph-schema is open-source software released under the [Apache 2 License](https://github.com/vivarium-collective/process-bigraph/blob/main/LICENSE).
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+ process-bigraph is open-source software released under the [Apache 2 License](https://github.com/vivarium-collective/process-bigraph/blob/main/LICENSE).
{process-bigraph-0.0.41 → process-bigraph-0.0.42}/README.md RENAMED
@@ -46,4 +46,4 @@ diagraph of a whole-cell E. coli model.
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  ## License
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- Bigraph-schema is open-source software released under the [Apache 2 License](https://github.com/vivarium-collective/process-bigraph/blob/main/LICENSE).
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+ process-bigraph is open-source software released under the [Apache 2 License](https://github.com/vivarium-collective/process-bigraph/blob/main/LICENSE).