prefig 0.4.6.dev20250929053415__tar.gz → 0.4.8__tar.gz

{prefig-0.4.6.dev20250929053415 → prefig-0.4.8}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: prefig
-Version: 0.4.6.dev20250929053415
+Version: 0.4.8
 Summary: An authoring system for mathematical diagrams
 Home-page: https://prefigure.org
 License: GPL-3.0-or-later
@@ -15,12 +15,12 @@ Classifier: Programming Language :: Python :: 3.12
 Provides-Extra: text
 Requires-Dist: click (>=8.1.7,<9.0.0)
 Requires-Dist: click-log (>=0.4.0,<0.5.0)
-Requires-Dist: lxml (>=5.3.0,<6.0.0)
+Requires-Dist: lxml (>=6,<7)
 Requires-Dist: networkx (>=2.5,<3.0)
 Requires-Dist: numpy (>=1.26,<2.0) ; python_version < "3.13"
-Requires-Dist: numpy (>=2.1.0,<3.0.0) ; python_version == "3.13"
+Requires-Dist: numpy (>=2.1.0,<3.0.0) ; python_version >= "3.13"
 Requires-Dist: pycairo (>=1.20,<2.0) ; extra == "text"
-Requires-Dist: scipy (>=1.14.1,<2.0.0) ; python_version == "3.13"
+Requires-Dist: scipy (>=1.14.1,<2.0.0) ; python_version >= "3.13"
 Requires-Dist: scipy (>=1.8,<2.0) ; python_version < "3.13"
 Requires-Dist: shapely (>=2.0.6,<3.0.0)
 Project-URL: Repository, https://github.com/davidaustinm/prefigure

{prefig-0.4.6.dev20250929053415 → prefig-0.4.8}/prefig/core/arrow.py

@@ -5,6 +5,7 @@ import numpy as np
 from . import utilities as util
 from . import CTM
 from . import user_namespace as un
+from . import repeat
 
 log = logging.getLogger('prefigure')
 
@@ -189,6 +190,11 @@ def add_arrowhead_marker(diagram,
             arrow_width = 13/3
         dims = (1, arrow_width) #11/3)
 
+    # EPUB does not allow some characters to appear in @id
+    # There is a possibility that we have # or . so we will
+    # replace them with this function call
+    id = repeat.epub_clean(id)
+
     # If we've already created this one, we'll just move on
     if diagram.has_reusable(id):
         return id

{prefig-0.4.6.dev20250929053415 → prefig-0.4.8}/prefig/core/diagram.py

@@ -3,6 +3,7 @@ import lxml.etree as ET
 import numpy as np
 import logging
 import copy
+import re
 from . import tags
 from . import user_namespace as un
 from . import utilities as util
@@ -10,9 +11,13 @@ from . import CTM
 from . import label
 from . import math_utilities as math_util
 from . import annotations
+from . import repeat
 
 log = logging.getLogger('prefigure')
 
+# regular expression to check if id is EPUB compliant
+epub_id_check = re.compile('^[A-Za-z0-9_-]+$')
+
 class Diagram:
     def __init__(self,
                  diagram_element,
@@ -129,9 +134,26 @@ class Diagram:
             for child in templates_element:
                 self.defaults[child.tag] = child
 
+        author_annotations = self.diagram_element.xpath('.//annotations')
+        self.author_annotations_present = len(author_annotations) > 0
+        if self.author_annotations_present:
+            self.check_annotation_ref(author_annotations[0])
+
         if self.defaults.get('macros', None) is not None:
             label.add_macros(self.defaults.get('macros').text)
 
+    def check_annotation_ref(self, element):
+        ref = element.get('ref', None)
+        if ref is not None:
+            if not bool(epub_id_check.fullmatch(ref)):
+                log.error(f"@ref {ref} in an annotation has characters disallowed by EPUB")
+                log.error("  We will replace these characters but there may be unexpected behavior")
+                log.error("  Search for EPUB in the PreFigure documentation https://prefigure.org")
+                ref = repeat.epub_clean(ref)
+                element.set('ref', ref)
+        for child in element:
+            self.check_annotation_ref(child)
+
     def add_legend(self, legend):
         self.legends.append(legend)
         
@@ -276,6 +298,7 @@ class Diagram:
             h = height + margins[1]+margins[3]
             self.root.set("width", str(w))
             self.root.set("height", str(h))
+            self.root.set("viewBox", f"0 0 {w} {h}")
 
             # initialize the CTM and push it onto the CTM stack
             ctm.translate(0, height + margins[1] + margins[3])
@@ -380,6 +403,18 @@ class Diagram:
             log.error(f"Unable to write SVG at {out+'.svg'}")
             return
 
+        if self.author_annotations_present and self.environment == "pretext":
+            # we will write out a second version of the diagram
+            # without the height and width attributes for diagcess use
+            self.root.attrib.pop("height")
+            self.root.attrib.pop("width")
+            try:
+                with ET.xmlfile(out + '-diagcess.svg', encoding='utf-8') as xf:
+                    xf.write(self.root, pretty_print=True)
+            except:
+                log.error(f"Unable to write SVG at {out+'-diagcess.svg'}")
+                return
+
         if self.annotations_root is not None:
             diagram = ET.Element('diagram')
             diagram.append(self.annotations_root)
@@ -436,6 +471,15 @@ class Diagram:
             # we're publicly using 'at' rather than 'id' for handles
             if child.get('at') is not None:
                 child.set('id', child.get('at'))
+
+            child_id = child.get('id', None)
+            if child_id is not None:
+                if not bool(epub_id_check.fullmatch(child_id)):
+                    log.error(f"The id {child_id} has characters disallowed by EPUB")
+                    log.error("  We will substitute disallowed characters to make the id EPUB compliant")
+                    log.error("  Search for EPUB in the PreFigure documentation at https://prefigure.org")
+                    child.set('id', repeat.epub_clean(child_id))
+
             # see if the publication flie has any defaults
             defaults = self.defaults.get(child.tag, None)
             if defaults is not None:

{prefig-0.4.6.dev20250929053415 → prefig-0.4.8}/prefig/core/repeat.py

@@ -2,6 +2,7 @@ import lxml.etree as ET
 import logging
 from . import user_namespace as un
 import copy
+import re
 import numpy as np
 from . import group
 from . import label
@@ -9,6 +10,25 @@ from . import utilities
 
 log = logging.getLogger('prefigure')
 
+# EPUB restricts the characters that can appear in an id to
+#   a-z|A-Z|0-9|_|-
+# This is an issue here since <repeat> elements can create id's
+# This regular expression checks characters to see if they are allowed
+epub_check = re.compile(r'[A-Za-z0-9_-]')
+
+# We also define substitutions for the most common disallowed characters
+epub_dict = {'(': 'p',
+             ')': 'q',
+             '[': 'p',
+             ']': 'q',
+             '{': 'p',
+             '}': 'q',
+             ',': 'c',
+             '.': 'd',
+             '=': '_',
+             r'#': 'h'}
+
+
 # Allows a block of XML to repeat with a changing parameter
 
 def repeat(element, diagram, parent, outline_status):
@@ -48,11 +68,12 @@ def repeat(element, diagram, parent, outline_status):
         else:
             k_str = str(k)
 
-        un.enter_namespace(k_str, k)
+        k_str_clean = epub_clean(k_str)
+        # This is a change since we use the syntax "var_str" for the id suffix
         if count:
-            suffix_str = var + "=" + k_str
+            suffix_str = var + "_" + k_str_clean
         else:
-            suffix_str = var + "=" + str(num)
+            suffix_str = var + "_" + str(num)
 
         definition = ET.SubElement(element, 'definition')
         definition.text = var + '=' + k_str
@@ -78,3 +99,13 @@ def repeat(element, diagram, parent, outline_status):
 
     if annotation is not None:
         diagram.pop_from_annotation_branch()
+
+def epub_clean(s):
+    epub_clean = [bool(epub_check.fullmatch(ch)) for ch in s]
+    chars = []
+    for index, ch in enumerate(s):
+        if epub_clean[index]:
+            chars.append(ch)
+            continue
+        chars.append(epub_dict.get(ch, '_'))
+    return "".join(chars)

prefig-0.4.8/prefig/resources/diagcess/diagcess.js

@@ -0,0 +1,7 @@
+/**
+ * Skipped minification because the original files appears to be already minified.
+ * Original file: /npm/diagcess@1.3.3/dist/diagcess.js
+ *
+ * Do NOT use SRI with dynamically generated files! More information: https://www.jsdelivr.com/using-sri-with-dynamic-files
+ */
+!function(t,e){"object"==typeof exports&&"object"==typeof module?module.exports=e():"function"==typeof define&&define.amd?define([],e):"object"==typeof exports?exports.diagcess=e():t.diagcess=e()}(this,()=>(()=>{"use strict";var t={38:(t,e)=>{Object.defineProperty(e,"__esModule",{value:!0}),e.CustomEvent=e.EventType=e.KeyCodes=void 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i=0;i<this.points.length;i++)this.points.length>20?(e=i/10+.01,n=i/10):(e=i/2+.01,n=i/2+.5),console.log(e),i?r.frequency.setValueAtTime(this.points[i][1]?t.BASE_FREQUENCY-this.points[i][1]:0,this.context.currentTime+n):(r.frequency.setValueAtTime(t.BASE_FREQUENCY-this.points[i][1],this.context.currentTime),r.start(this.context.currentTime));return r.stop(this.context.currentTime+n),o},t.prototype.smooth=function(){if(this.points.length){for(var e=[this.points[0]],n=0;n<this.points.length-1;n++){for(var o=this.points[n][0],r=this.points[n][1],i=this.points[n+1][0],c=this.points[n+1][1],a=Math.abs(o-i)/t.SMOOTH_VALUE,s=Math.abs(r-c)/t.SMOOTH_VALUE,l=Math.sign(c-r),u=1;u<t.SMOOTH_VALUE;u++)e.push([o+u*a,r+l*u*s]);e.push([i,c])}this.points=e}},t.BASE_FREQUENCY=300,t.SMOOTH_VALUE=4,t}();e.Sonify=i},914:(t,e,n)=>{Object.defineProperty(e,"__esModule",{value:!0}),e.Neighbour=void 0;var o=n(502),r=n(297),i=function(){function t(t,e){var n=this;this.from_=t,this.annotation_=e,this.speech=null,this.speech2=null;var i=o.children(this.annotation_);this.to_=this.from_.getDiagram().get(o.getTextContent(i[0])),this.location=o.getAttribute(this.annotation_,o.attr.LOCATION),this.via_=i.slice(1).map(function(t){return new r.Via(n,t)})}return t.prototype.from=function(){return this.from_},t.prototype.to=function(){return this.to_},t.prototype.via=function(){return this.via_},t.prototype.getSpeech=function(){return this.from_.getDiagram().translate(this.getMessage())},t.prototype.getMessage=function(){if(o.EXPERT_MODE){if(this.speech2)return this.speech2;if(this.speech2=o.getAttribute(this.annotation_,o.attr.EXPERT_SPEECH),this.speech2)return this.speech2}return this.speech||(this.speech=o.getAttribute(this.annotation_,o.attr.SIMPLE_SPEECH)),this.speech},t}();e.Neighbour=i},981:(t,e,n)=>{Object.defineProperty(e,"__esModule",{value:!0}),e.Molecule=void 0;var o=n(502),r=n(441),i=function(){function t(t,e,n){this.node=t,this.svg=e,this.cml=n,this.id=o.getId(),o.classList.add(this.svg,this.id),o.classList.add(this.cml,this.id),this.cmlStructure=new r.CML(this.cml),this.topLevelDescription=this.cmlStructure.getRootElement().getSpeech(),this.combine_()}return t.prototype.createElement=function(t){var e=document.createElement(t);return e.classList.add(this.id),e},t.prototype.combine_=function(){var t=this;this.cmlStructure.getMap().forEach(function(e){var n=t.svg.getElementById(e.getId());n&&e.setDrawnElement(n)})},t}();e.Molecule=i}},e={};function n(o){var r=e[o];if(void 0!==r)return r.exports;var i=e[o]={exports:{}};return t[o].call(i.exports,i,i.exports,n),i.exports}var o={};return(()=>{var t=o;Object.defineProperty(t,"__esModule",{value:!0}),t.version=t.Config=t.Base=void 0;var e=n(225),r=n(516);t.Base=r.Base,t.Config=e.config,t.version=e.version})(),o})());

{prefig-0.4.6.dev20250929053415 → prefig-0.4.8}/prefig/resources/schema/pf_schema.rnc

@@ -48,7 +48,7 @@ DefinitionElements =
     Derivative?,
     DE-Solution?,
     Define-Shapes?,
-    Read
+    Read?
 
 Definition = element definition {
     text,
@@ -177,7 +177,9 @@ LabelAttributes =
     attribute rotate {text}?,
     attribute clear-background {"yes"|"no"}?,
     attribute background-margin {text}?,
-    attribute color {text}?
+    attribute color {text}?,
+    attribute font {text}?,
+    attribute font-size {text}?
 
 Math = element m {attribute color {text}? & text}
 Bold = element b {attribute color {text}? & text & Italic*}