pninexus 3.0.3__tar.gz → 3.2.1__tar.gz

pninexus-3.2.1/PKG-INFO

@@ -0,0 +1,173 @@
+Metadata-Version: 1.2
+Name: pninexus
+Version: 3.2.1
+Summary: Python wrapper for the H5CPP and PNI libraries
+Home-page: https://github.com/pni-libraries/python-pninexus
+Author: Eugen Wintersberger
+Author-email: eugen.wintersberger@desy.de
+Maintainer: Eugen Wintersberger, Jan Kotanski
+Maintainer-email: jan.kotanski@desy.de
+License: GPLv2
+Description: Python bindings for PNI/NeXus and h5cpp
+        =======================================
+        
+        
+        |github workflow|
+        |docs|
+        |Pypi Version|
+        |Python Versions|
+        
+        .. |github workflow| image:: https://github.com/pni-libraries/python-pninexus/actions/workflows/tests.yml/badge.svg
+           :target: https://github.com/pni-libraries/python-pninexus/actions
+           :alt:
+        
+        .. |docs| image:: https://img.shields.io/badge/Documentation-webpages-ADD8E6.svg
+           :target: https://pni-libraries.github.io/python-pninexus/index.html
+           :alt:
+        
+        .. |Pypi Version| image:: https://img.shields.io/pypi/v/pninexus.svg
+                          :target: https://pypi.python.org/pypi/pninexus
+                          :alt:
+        
+        .. |Python Versions| image:: https://img.shields.io/pypi/pyversions/pninexus.svg
+                             :target: https://pypi.python.org/pypi/pninexus/
+                             :alt:
+        
+        
+        Python wrapper for the `h5cpp <https://github.com/ess-dmsc/h5cpp>`__ and
+        `libpninexus <https://github.com/pni-libraries/libpninexus>`__ C++
+        libraries. The wrapper supports Python 2.X and 3.X.
+        
+        Installation
+        ------------
+        
+        Required packages
+        ~~~~~~~~~~~~~~~~~
+        
+        -  *h5cpp* >= 0.5.0
+        -  *libpninexus* >= 3.2.0
+        -  python setuptools
+        -  numpy
+        -  c++ compiler
+        -  boost-python library
+        -  python sphinx to build the documentation
+        
+        Install from sources
+        ~~~~~~~~~~~~~~~~~~~~
+        
+        The code can be built with
+        
+        ::
+        
+               $ python setup.py install
+        
+        For those who are still running on the old interface it is maybe whise
+        to install this package in a custom location with something like this
+        
+        ::
+        
+               $ python setup.py install --prefix=<path to installation prefix>
+        
+        To build the documentation use
+        
+        ::
+        
+               $ python setup.py build_sphinx
+        
+        The resulting documentation can be found below ``build/sphinx/html`` in
+        the root directory of the source distribution.
+        
+        Finally, the package can be tested using
+        
+        ::
+        
+               $ python setup.py test
+        
+        For Python3 just replace python with python3 in the above instructions.
+        
+        Debian and Ubuntu packages
+        ~~~~~~~~~~~~~~~~~~~~~~~~~~
+        
+        Debian ``bookworm``, ``bullseye``, ``buster`` or Ubuntu ``lunar``,
+        ``jammy``, ``focal`` packages can be found in the HDRI repository.
+        
+        To install the debian packages, add the PGP repository key
+        
+        ::
+        
+               $ sudo su
+               $ curl -s http://repos.pni-hdri.de/debian_repo.pub.gpg  | gpg --no-default-keyring --keyring gnupg-ring:/etc/apt/trusted.gpg.d/debian-hdri-repo.gpg --import
+               $ chmod 644 /etc/apt/trusted.gpg.d/debian-hdri-repo.gpg
+        
+        and then download the corresponding source list, e.g. for ``bullseye``
+        
+        ::
+        
+               $ cd /etc/apt/sources.list.d
+               $ wget http://repos.pni-hdri.de/bullseye-pni-hdri.list
+        
+        or ``jammy``
+        
+        ::
+        
+               $ cd /etc/apt/sources.list.d
+               $ wget http://repos.pni-hdri.de/jammy-pni-hdri.list
+        
+        respectively.
+        
+        Finally,
+        
+        ::
+        
+               $ apt-get update
+               $ apt-get install python-pninexus
+        
+        or
+        
+        ::
+        
+               $ apt-get update
+               $ apt-get install python3-pninexus
+        
+        for python3.
+        
+        
+        Manylinux wheels from PyPI
+        ~~~~~~~~~~~~~~~~~~~~~~~~~~
+        
+        To install pninexus in a conda or python virtual environment manylinux pip wheels can be used, e.g.
+        
+        .. code-block:: console
+        
+           $ python3 -m venv myvenv
+           $ . myvenv/bin/activate
+           
+           $ pip install pip --upgrade
+           $ pip install numpy
+           
+           $ pip install pninexus -U wheel
+        
+        For some versions of wheels numpy needs to be installed in advance.
+        
+        
+        
+        More information can be found at `online
+        documentation <https://pni-libraries.github.io/python-pninexus/index.html>`__.
+        
+        Changes for a specific version of libpninexus can be found at
+        `CHANGELOG <https://github.com/pni-libraries/python-pninexus/blob/develop/CHANGELOG.md>`__.
+        
+        
+Keywords: h5cpp hdf5 python photon science detector
+Platform: UNKNOWN
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Intended Audience :: Science/Research
+Classifier: Topic :: Scientific/Engineering :: Physics
+Classifier: Topic :: Software Development :: Libraries :: Python Modules
+Classifier: License :: OSI Approved :: GNU General Public License v2 (GPLv2)
+Classifier: Programming Language :: Python :: 2.7
+Classifier: Programming Language :: Python :: 3.7
+Classifier: Programming Language :: Python :: 3.8
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11

{pninexus-3.0.3 → pninexus-3.2.1}/doc/sphinx/conf.py

@@ -113,7 +113,7 @@ pygments_style = 'sphinx'
 # Theme options are theme-specific and customize the look and feel of a theme
 # further.  For a list of options available for each theme, see the
 # documentation.
-#html_theme_options = {}
+html_theme_options = {"sidebarwidth":500}
 
 # Add any paths that contain custom themes here, relative to this directory.
 #html_theme_path = []
@@ -159,7 +159,9 @@ html_sidebars = {
 }
 
 html_context = {
-    "docs_versions" : ["v3.0.3", "v3.0.2", "v3.0.1", "v3.0.0", "v2.0.0", "v1.3.4"]
+    "docs_versions" : [
+        "v3.2.1", "v3.2.0", "v3.1.0",
+        "v3.0.3", "v3.0.2", "v3.0.1", "v3.0.0", "v2.0.0", "v1.3.4"]
 }
 
 # Additional templates that should be rendered to pages, maps page names to

{pninexus-3.0.3 → pninexus-3.2.1}/doc/sphinx/installation.rst

@@ -66,11 +66,11 @@ keyring
 The return value of this command line should be `OK`.
 In a next step you have to add new package sources to your system. For this
 purpose go to :file:`/etc/apt/sources.list.d` and download the sources file.
-For Debian (Bullseye) use
+For Debian (Bookworm) use
 
 .. code-block:: bash
 
-   $ wget http://repos.pni-hdri.de/bullseye-hdri.list
+   $ wget http://repos.pni-hdri.de/bookworm-hdri.list
 
 and for Ubuntu (Jammy)
 
@@ -78,7 +78,7 @@ and for Ubuntu (Jammy)
 
    $ wget http://repos.pni-hdri.de/jammy-pni-hdri.list
 
-Similarly, proceed for Bullseye, Buster, Stretch, Kinetic, Jammy, Focal or Bionic.
+Similarly, proceed for Bookworm, Bullseye, Buster, Lunar, Jammy, Focal.
 Once you have downloaded the file use
 
 .. code-block:: bash
@@ -99,3 +99,28 @@ or
    $ apt-get install python3-pninexus
 
 to install the the PNI/NeXus package for python or python3, respectively.
+
+Manylinux wheels from PyPI
+==========================
+
+To install pninexus in a conda or python virtual environment manylinux pip wheels can be used, e.g.
+
+.. code-block:: console
+
+   $ python3 -m venv myvenv
+   $ . myvenv/bin/activate
+   
+   $ pip install pip --upgrade
+   $ pip install numpy
+   
+   $ pip install pninexus -U wheel
+
+For some versions of wheels numpy needs to be installed in advance.
+
+
+
+More information can be found at `online
+documentation <https://pni-libraries.github.io/python-pninexus/index.html>`__.
+
+Changes for a specific version of libpninexus can be found at
+`CHANGELOG <https://github.com/pni-libraries/python-pninexus/blob/develop/CHANGELOG.md>`__.

{pninexus-3.0.3 → pninexus-3.2.1}/setup.py

@@ -1,23 +1,28 @@
 # setup script for python-pninexus
 from __future__ import print_function
+import codecs
 import sys
 import os
 import os.path
-from numpy.distutils.misc_util import get_numpy_include_dirs
+import numpy
 from setuptools import setup
-from sphinx.setup_command import BuildDoc
 from distutils.command.install import install
 import sysconfig
 from build_tools import (CppExtensionFactory,
                          ConanBuildInfoBuilder,
                          BuildConfiguration)
 
+cmdclass = {}
+try:
+    from sphinx.setup_command import BuildDoc
+    cmdclass['build_sphinx'] = BuildDoc
+except ImportError:
+    print('WARNING: sphinx is not available, not building docs')
 
-cmdclass = {'build_sphinx': BuildDoc}
 name = "pninexus"
-version = "3.0.3"
-release = "3.0.3"
-# release = "3.0"
+version = "3.2.1"
+release = "3.2.1"
+# release = "3.2"
 
 if release.count(".") == 1:
     docs_release = '(latest)'
@@ -25,6 +30,17 @@ else:
     docs_release = release
 
 
+def read(fname):
+    """ read the file
+
+    :param fname: readme file name
+    :type fname: :obj:`str`
+    """
+    with codecs.open(os.path.join('.', fname), encoding='utf-8') as f:
+        long_description = f.read()
+    return long_description
+
+
 def get_build_dir():
     build_dir = "lib.{platform}-{version[0]}.{version[1]}"
 
@@ -92,8 +108,7 @@ else:
 #
 # adding include directories from numpy
 #
-
-nexus_config.add_include_directories(get_numpy_include_dirs())
+nexus_config.add_include_directories([numpy.get_include()])
 
 
 # ----------------------------------------------------------------------------
@@ -102,7 +117,7 @@ nexus_config.add_include_directories(get_numpy_include_dirs())
 if sys.platform == "win32":
     pass
 else:
-    arguments = ['-std=c++11', '-Wall', '-Wextra', '-fdiagnostics-show-option']
+    arguments = ['-std=c++17', '-Wall', '-Wextra', '-fdiagnostics-show-option']
     nexus_config.add_compiler_arguments(arguments)
 
 # ----------------------------------------------------------------------------
@@ -202,13 +217,12 @@ setup(
     author="Eugen Wintersberger",
     author_email="eugen.wintersberger@desy.de",
     description="Python wrapper for the H5CPP and PNI libraries",
-    long_description="This package provides wrappers for the PNI C++ " +
-    "libraries libpninexus and libh5cpp.",
+    long_description=read('README.rst'),
     maintainer="Eugen Wintersberger, Jan Kotanski",
     maintainer_email="jan.kotanski@desy.de",
     license="GPLv2",
     version=release,
-    requires=["numpy"],
+    install_requires=["numpy"],
     ext_modules=[
         h5cpp_core_ext,
         h5cpp_attribute_ext,
@@ -239,13 +253,11 @@ setup(
         'Topic :: Software Development :: Libraries :: Python Modules',
         'License :: OSI Approved :: GNU General Public License v2 (GPLv2)',
         'Programming Language :: Python :: 2.7',
-        'Programming Language :: Python :: 3',
-        'Programming Language :: Python :: 3.4',
-        'Programming Language :: Python :: 3.5',
-        'Programming Language :: Python :: 3.6',
         'Programming Language :: Python :: 3.7',
         'Programming Language :: Python :: 3.8',
         'Programming Language :: Python :: 3.9',
+        'Programming Language :: Python :: 3.10',
+        'Programming Language :: Python :: 3.11',
     ],
     test_suite="test",
     test_loader="unittest:TestLoader",

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/h5cpp/boost_filesystem_path_conversion.cpp

@@ -27,10 +27,10 @@ using namespace boost::python;
 
 BoostFilesystemPathToPythonObject::BoostFilesystemPathToPythonObject()
 {
-  to_python_converter<boost::filesystem::path,BoostFilesystemPathToPythonObject>();
+  to_python_converter<fs::path,BoostFilesystemPathToPythonObject>();
 }
 
-PyObject *BoostFilesystemPathToPythonObject::convert(const boost::filesystem::path &path)
+PyObject *BoostFilesystemPathToPythonObject::convert(const fs::path &path)
 {
   return incref(object(path.string()).ptr());
 }
@@ -38,7 +38,7 @@ PyObject *BoostFilesystemPathToPythonObject::convert(const boost::filesystem::pa
 PythonObjectToBoostFilesystemPath::PythonObjectToBoostFilesystemPath()
 {
   converter::registry::push_back(&convertible,&construct,
-                                 type_id<boost::filesystem::path>());
+                                 type_id<fs::path>());
 }
 
 void *PythonObjectToBoostFilesystemPath::convertible(PyObject *ptr)
@@ -57,6 +57,7 @@ void PythonObjectToBoostFilesystemPath::construct(PyObject *ptr,rvalue_type *dat
   boost::python::str py_string(handle<>(borrowed(ptr)));
 
   void *storage = ((storage_type*)data)->storage.bytes;
-  new (storage) boost::filesystem::path(extract<std::string>(py_string));
+  std::string path = extract<std::string>(py_string);
+  new (storage) fs::path(path);
   data->convertible = storage;
 }

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/h5cpp/boost_filesystem_path_conversion.hpp

@@ -23,29 +23,29 @@
 #pragma once
 
 #include <boost/python.hpp>
-#include <boost/filesystem.hpp>
+#include <h5cpp/core/filesystem.hpp>
 
 //!
-//! @brief convert boost::filesystem::path to a Python object
+//! @brief convert fs::path to a Python object
 //!
-//! Instances of boost::filesystem::path are converted to a Python string
+//! Instances of fs::path are converted to a Python string
 //!
 struct BoostFilesystemPathToPythonObject
 {
     BoostFilesystemPathToPythonObject();
-    static PyObject *convert(const boost::filesystem::path &path);
+    static PyObject *convert(const fs::path &path);
 };
 
 //!
 //! @brief convert a Python string to boost::fileystem::path
 //!
-//! Python strings can be converted to an instance of boost::filesystem::path
+//! Python strings can be converted to an instance of fs::path
 //! if required.
 //!
 struct PythonObjectToBoostFilesystemPath
 {
     using rvalue_type = boost::python::converter::rvalue_from_python_stage1_data;
-    using storage_type = boost::python::converter::rvalue_from_python_storage<boost::filesystem::path>;
+    using storage_type = boost::python::converter::rvalue_from_python_storage<fs::path>;
 
     PythonObjectToBoostFilesystemPath();
 

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/h5cpp/file/file.cpp

@@ -55,7 +55,7 @@ using namespace boost::python;
 
 BOOST_PYTHON_MEMBER_FUNCTION_OVERLOADS(root_overloads,root,0,0);
 
-hdf5::file::File create_file(const boost::filesystem::path &file_path,
+hdf5::file::File create_file(const fs::path &file_path,
                              hdf5::file::AccessFlagsBase flags,
                              const hdf5::property::FileCreationList &fcpl,
                              const hdf5::property::FileAccessList &fapl)
@@ -63,7 +63,7 @@ hdf5::file::File create_file(const boost::filesystem::path &file_path,
   return hdf5::file::create(file_path,flags,fcpl,fapl);
 }
 
-hdf5::file::File open_file(const boost::filesystem::path &file_path,
+hdf5::file::File open_file(const fs::path &file_path,
                            hdf5::file::AccessFlagsBase flags,
                            const hdf5::property::FileAccessList &fapl)
 {

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/h5cpp/node/functions.cpp

@@ -57,7 +57,7 @@ void create_function_wrapper()
   //
   // get node functions
   //
-  def("get_node",get_node,(arg("base"),
+  def("get_node_",get_node,(arg("base"),
                            arg("path"),
                            arg("lapl")=hdf5::property::LinkAccessList()));
 
@@ -115,7 +115,7 @@ void create_function_wrapper()
                            const hdf5::Path &,
                            const hdf5::property::LinkCreationList &,
                            const hdf5::property::LinkAccessList &) = &hdf5::node::link;
-  void (*link_external)(const boost::filesystem::path &,
+  void (*link_external)(const fs::path &,
                         const hdf5::Path &,
                         const hdf5::node::Group &,
                         const hdf5::Path &,

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/h5cpp/node/nodes.cpp

@@ -281,17 +281,17 @@ BOOST_PYTHON_MODULE(_node)
       .def_readonly("links",&Group::links)
       .def_readonly("nodes",&Group::nodes)
       .def("close",&Group::close)
-      .def("get_group", &Group::get_group,
-	   (arg("base"), arg("path"),
+      .def("get_group_", &Group::get_group,
+	   (arg("path"),
 	    arg("lapl")=hdf5::property::LinkAccessList()))
-      .def("get_dataset", &Group::get_dataset,
-	   (arg("base"), arg("path"),
+      .def("get_dataset_", &Group::get_dataset,
+	   (arg("path"),
 	    arg("lapl")=hdf5::property::LinkAccessList()))
-      .def("has_group", &Group::has_group,
-	   (arg("base"), arg("path"),
+      .def("has_group_", &Group::has_group,
+	   (arg("path"),
 	    arg("lapl")=hdf5::property::LinkAccessList()))
-      .def("has_dataset", &Group::has_dataset,
-	   (arg("base"), arg("path"),
+      .def("has_dataset_", &Group::has_dataset,
+	   (arg("path"),
 	    arg("lapl")=hdf5::property::LinkAccessList()))
       ;
 

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/h5cpp/property/class_wrappers.cpp

@@ -171,8 +171,8 @@ void create_class_wrappers()
 
   size_t (LinkAccessList::*get_link_traversals)() const = &LinkAccessList::maximum_link_traversals;
   void (LinkAccessList::*set_link_traversals)(size_t) const= &LinkAccessList::maximum_link_traversals;
-  boost::filesystem::path (LinkAccessList::*get_external_link_prefix)() const =  &LinkAccessList::external_link_prefix;
-  void (LinkAccessList::*set_external_link_prefix)(const boost::filesystem::path &) =  &LinkAccessList::external_link_prefix;
+  fs::path (LinkAccessList::*get_external_link_prefix)() const =  &LinkAccessList::external_link_prefix;
+  void (LinkAccessList::*set_external_link_prefix)(const fs::path &) =  &LinkAccessList::external_link_prefix;
 
   class_<LinkAccessList,bases<List>>("LinkAccessList")
       .add_property("maximum_link_traversals",get_link_traversals,set_link_traversals)

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/h5cpp/property/property.cpp

@@ -60,7 +60,7 @@ BOOST_PYTHON_MODULE(_property)
 
 #if H5_VERSION_GE(1, 10, 0)
   class_<VirtualDataMap>("VirtualDataMap")
-    .def(init<View,boost::filesystem::path,Path,View>((arg("target_view"),arg("source_file"),arg("source_dataset"),arg("source_view"))))
+    .def(init<View,fs::path,Path,View>((arg("target_view"),arg("source_file"),arg("source_dataset"),arg("source_view"))))
     ;
   class_<VirtualDataMaps>("VirtualDataMaps") 
     .def("add", add_map)

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/nexus/nexus.cpp

@@ -75,7 +75,7 @@ BOOST_PYTHON_MODULE(_nexus)
   //
   def("is_nexus_file",&pni::nexus::is_nexus_file);
 
-  hdf5::file::File (*create_file_flag)(const boost::filesystem::path &,
+  hdf5::file::File (*create_file_flag)(const fs::path &,
                                        hdf5::file::AccessFlagsBase,
                                        const hdf5::property::FileCreationList &,
                                        const hdf5::property::FileAccessList &) = &pni::nexus::create_file;
@@ -84,7 +84,7 @@ BOOST_PYTHON_MODULE(_nexus)
                                       arg("fcpl")=hdf5::property::FileCreationList(),
                                       arg("fapl")=hdf5::property::FileAccessList()));
 
-  hdf5::file::File (*open_file_flag)(const boost::filesystem::path &,
+  hdf5::file::File (*open_file_flag)(const fs::path &,
                                      hdf5::file::AccessFlagsBase,
                                      const hdf5::property::FileAccessList &) = &pni::nexus::open_file;
   def("open_file",open_file_flag,(arg("path"),

{pninexus-3.0.3 → pninexus-3.2.1}/src/cpp/nexus/path.cpp

@@ -28,10 +28,18 @@
 using namespace boost::python;
 using namespace pni;
 
+nexus::PathObjectList get_objects_path(const hdf5::node::Group &base,
+				       const nexus::Path &path)
+{
+  return nexus::get_objects(base, path);
+}
+
+
+
 void create_path_wrappers()
 {
-  void (nexus::Path::*set_filename)(const boost::filesystem::path &) = &nexus::Path::filename;
-  boost::filesystem::path (nexus::Path::*get_filename)() const = &nexus::Path::filename;
+  void (nexus::Path::*set_filename)(const fs::path &) = &nexus::Path::filename;
+  fs::path (nexus::Path::*get_filename)() const = &nexus::Path::filename;
   void (nexus::Path::*set_attribute)(const std::string &) = &nexus::Path::attribute;
   std::string (nexus::Path::*get_attribute)() const = &nexus::Path::attribute;
   nexus::Path::ConstElementIterator (nexus::Path::*cbegin)() const = &nexus::Path::begin;
@@ -39,6 +47,7 @@ void create_path_wrappers()
   class_<nexus::Path>("Path")
       .def(init<const nexus::Path&>())
       .def(init<const hdf5::Path&>())
+      .def(init<const std::string&>())
       .def("from_string",&nexus::Path::from_string)
       .staticmethod("from_string")
       .def("to_string",&nexus::Path::to_string)
@@ -80,7 +89,7 @@ void create_path_wrappers()
   def("get_path",get_path_node);
   def("get_path",get_path_attr);
 
-  def("get_objects",nexus::get_objects);
+  def("get_objects_", get_objects_path);
 
   nxpath_element_to_dict_converter();
   dict_to_nxpath_element_converter();

{pninexus-3.0.3 → pninexus-3.2.1}/src/pninexus/h5cpp/node/__init__.py

@@ -31,7 +31,7 @@ from pninexus.h5cpp._node import RecursiveNodeIterator
 #
 from pninexus.h5cpp._node import is_dataset
 from pninexus.h5cpp._node import is_group
-from pninexus.h5cpp._node import get_node
+from pninexus.h5cpp._node import get_node_
 
 from pninexus.h5cpp._node import _copy
 from pninexus.h5cpp._node import _link
@@ -386,10 +386,60 @@ def dataset_filters(self):
     return efilters
 
 
+def group_get_dataset(self, path, lapl=None):
+    if isinstance(path, str):
+        path = Path(path)
+    if lapl is None:
+        return self.get_dataset_(path)
+    else:
+        return self.get_dataset_(path, lapl)
+
+
+def group_has_dataset(self, path, lapl=None):
+    if isinstance(path, str):
+        path = Path(path)
+    if lapl is None:
+        return self.has_dataset_(path)
+    else:
+        return self.has_dataset_(path, lapl)
+
+
+def group_get_group(self, path, lapl=None):
+    if isinstance(path, str):
+        path = Path(path)
+    if lapl is None:
+        return self.get_group_(path)
+    else:
+        return self.get_group_(path, lapl)
+
+
+def group_has_group(self, path, lapl=None):
+    if isinstance(path, str):
+        path = Path(path)
+    if lapl is None:
+        return self.has_group_(path)
+    else:
+        return self.has_group_(path, lapl)
+
+
+def get_node(base, path, lapl=None):
+    if isinstance(path, str):
+        path = Path(path)
+    if lapl is None:
+        return get_node_(base, path)
+    else:
+        return get_node_(base, path, lapl)
+
+
 Dataset.write = dataset_write
 Dataset.read = dataset_read
 Dataset.filters = dataset_filters
 
+Group.get_dataset = group_get_dataset
+Group.has_dataset = group_has_dataset
+Group.get_group = group_get_group
+Group.has_group = group_has_group
+
 
 __all__ = ["Type", "LinkType", "Node", "GroupView", "NodeView", "LinkView",
            "Group", "Dataset", "LinkTarget", "Link", "RecursiveNodeIterator",

{pninexus-3.0.3 → pninexus-3.2.1}/src/pninexus/nexus/__init__.py

@@ -40,7 +40,13 @@ from ._nexus import join
 from ._nexus import make_relative
 from ._nexus import match
 from ._nexus import get_path
-from ._nexus import get_objects
+from ._nexus import get_objects_
+
+
+def get_objects(base, path):
+    if isinstance(path, str):
+        path = Path(path)
+    return get_objects_(base, path)
 
 
 def base_class_factory_create(parent, name, base_class,