pma-python 2.0.0.174__tar.gz → 2.0.0.176__tar.gz

pma_python-2.0.0.176/PKG-INFO

@@ -0,0 +1,66 @@
+Metadata-Version: 2.1
+Name: pma_python
+Version: 2.0.0.176
+Summary: Universal viewing of digital microscopy, whole slide imaging and digital pathology data
+Home-page: http://github.com/pathomation/pma_python
+Author: Pathomation
+Author-email: info@pathomation.com
+License: http://free.pathomation.com/eula/
+Keywords: wsi whole slide imaging gigapixel microscopy histology pathology
+Classifier: Development Status :: 3 - Alpha
+Classifier: Programming Language :: Python :: 3
+Requires-Python: >=3
+Requires-Dist: pandas
+Requires-Dist: pillow
+Requires-Dist: requests
+Requires-Dist: requests_toolbelt
+
+pma_python is a Python wrapper library for PMA.start (http://free.pathomation.com),
+a universal viewer by Pathomation for whole slide imaging and microscopy.
+
+YOU NEED TO HAVE PMA.START (OR PMA.CORE) RUNNING IN ORDER TO USE THIS
+LIBRARY. PMA_PYTHON IS NOT A STAND-ALONE LIBRARY FOR WSI.
+
+If you're working with
+
+* microscopy data and are you tired of having to use a different library for each vendor specific digital slide format
+* image analysis software and are you looking for a way to have complete control over your algorithms (and not just be able to select those provided for you)
+* novel evaluation methods for histology / pathology and do you just wish there was a way to now automatically evaluate it on 100s of slides (batch processing)
+
+and you're doing all of this in Python, then PMA.start and 
+pma_python are for you! 
+
+PMA.start can be downloaded free of charge from http://free.pathomation.com
+
+With pma_python, you can inspect and navigate any type of 
+microscopic imaging file format available. Whether you have 
+macroscopic observations, whole slide imaging data, or fluorescent 
+snapshot observations, we can bring it all into Python now.
+
+The following vendor formats are currently supported:
+
+* TIFF (.tif, .tiff) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE		
+* JPEG (.jpeg, .jpg)
+* JPEG 2000 (.jp2)
+* PNG (.png)
+* Olympus VSI (.vsi) with lossless JPEG, JPEG, Raw
+* Ventana / Roche BIF (.bif)
+* Hamamatsu (.vms, .ndpi, .dcm) with JPEG, JPEG2000
+* Huron Technologies (.tif)
+* 3DHistech (.mrxs) with JPEG, PNG, BMP
+* Aperio / Leica (.svs, .cws, .scn, .lif, DICOMDIR) with JPEG, JPEG2000
+* Carl Zeiss (.zvi, .czi, .lsm) with Raw, PNG, JPEG, LZW, Deflate, JPEG2000	
+* Open Microscopy Environment OME-TIFF (.tf2, .tf8, .btf, .ome.tif)
+* Nikon (.nd2, .tiff) with Deflate, JPEG, JPEG2000, LZW, Deflate, Raw, RLE	
+* Philips (.tif) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE		
+* Sakura (.svslide) with JPEG(sqlite2, sqlite3, mssql)
+* Menarini (.ini) with Raw
+* Motic (.mds) 
+* Zoomify (.zif) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE
+* SmartZoom	(.szi) with JPEG, BMP
+* Objective Imaging / Glissano (.sws)
+* Perkin Elmer (.qptiff)
+
+The most up to date list with supported file formats can be found at
+http://free.pathomation.com/formats
+

{pma_python-2.0.0.174 → pma_python-2.0.0.176}/README.md

@@ -1,69 +1,69 @@
-# pma_python
-pma_python is a Python wrapper library for PMA.start (http://free.pathomation.com), 
-a universal viewer by Pathomation for whole slide imaging and microscopy.
-
-YOU NEED TO HAVE PMA.START (OR PMA.CORE) RUNNING IN ORDER TO USE THIS
-LIBRARY. PMA_PYTHON IS NOT A STAND-ALONE LIBRARY FOR WSI.
-
-If you're working with
-
-* microscopy data and are you tired of having to use a different 
-library for each vendor specific digital slide format
-* image analysis software and are you looking for a way to have 
-complete control over your algorithms (and not just be able to 
-select those provided for you)
-* novel evaluation methods for histology / pathology and do you 
-just wish there was a way to now automatically evaluate it on 
-100s of slides (batch processing)
-
-and you're doing all of this in Python, then PMA.start and 
-pma_python are for you! 
-
-PMA.start can be downloaded free of charge from http://free.pathomation.com
-
-With pma_python, you can inspect and navigate any type of 
-microscopic imaging file format available. Whether you have 
-macroscopic observations, whole slide imaging data, or fluorescent 
-snapshot observations, we can bring it all into Python now.
-
-The following vendor formats are currently supported:
-
-* TIFF (.tif, .tiff) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE		
-* JPEG (.jpeg, .jpg)
-* JPEG 2000 (.jp2)
-* PNG (.png)
-* Olympus VSI (.vsi) with lossless JPEG, JPEG, Raw
-* Ventana / Roche BIF (.bif)
-* Hamamatsu (.vms, .ndpi, .dcm) with JPEG, JPEG2000
-* Huron Technologies (.tif)
-* 3DHistech (.mrxs) with JPEG, PNG, BMP
-* Aperio / Leica (.svs, .cws, .scn, .lif, DICOMDIR) with JPEG, JPEG2000
-* Carl Zeiss (.zvi, .czi, .lsm) with Raw, PNG, JPEG, LZW, Deflate, JPEG2000	
-* Open Microscopy Environment OME-TIFF (.tf2, .tf8, .btf, .ome.tif)
-* Nikon (.nd2, .tiff) with Deflate, JPEG, JPEG2000, LZW, Deflate, Raw, RLE	
-* Philips (.tif) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE		
-* Sakura (.svslide) with JPEG(sqlite2, sqlite3, mssql)
-* Menarini (.ini) with Raw
-* Motic (.mds) 
-* Zoomify (.zif) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE
-* SmartZoom	(.szi) with JPEG, BMP
-* Objective Imaging / Glissano (.sws)
-* Perkin Elmer (.qptiff)
-
-The most up to date list with supported file formats can be found at
-http://free.pathomation.com/formats
-
-## Installation from source
-To install from pypi
-```sh
-pip install pma_python
-```
-To upgrade an already existing version from pypi
-```sh
-pip install --upgrade pma_python
-```
-
-## How to use
-```python
->>> from pma_python import *
-```
+# pma_python
+pma_python is a Python wrapper library for PMA.start (http://free.pathomation.com), 
+a universal viewer by Pathomation for whole slide imaging and microscopy.
+
+YOU NEED TO HAVE PMA.START (OR PMA.CORE) RUNNING IN ORDER TO USE THIS
+LIBRARY. PMA_PYTHON IS NOT A STAND-ALONE LIBRARY FOR WSI.
+
+If you're working with
+
+* microscopy data and are you tired of having to use a different 
+library for each vendor specific digital slide format
+* image analysis software and are you looking for a way to have 
+complete control over your algorithms (and not just be able to 
+select those provided for you)
+* novel evaluation methods for histology / pathology and do you 
+just wish there was a way to now automatically evaluate it on 
+100s of slides (batch processing)
+
+and you're doing all of this in Python, then PMA.start and 
+pma_python are for you! 
+
+PMA.start can be downloaded free of charge from http://free.pathomation.com
+
+With pma_python, you can inspect and navigate any type of 
+microscopic imaging file format available. Whether you have 
+macroscopic observations, whole slide imaging data, or fluorescent 
+snapshot observations, we can bring it all into Python now.
+
+The following vendor formats are currently supported:
+
+* TIFF (.tif, .tiff) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE		
+* JPEG (.jpeg, .jpg)
+* JPEG 2000 (.jp2)
+* PNG (.png)
+* Olympus VSI (.vsi) with lossless JPEG, JPEG, Raw
+* Ventana / Roche BIF (.bif)
+* Hamamatsu (.vms, .ndpi, .dcm) with JPEG, JPEG2000
+* Huron Technologies (.tif)
+* 3DHistech (.mrxs) with JPEG, PNG, BMP
+* Aperio / Leica (.svs, .cws, .scn, .lif, DICOMDIR) with JPEG, JPEG2000
+* Carl Zeiss (.zvi, .czi, .lsm) with Raw, PNG, JPEG, LZW, Deflate, JPEG2000	
+* Open Microscopy Environment OME-TIFF (.tf2, .tf8, .btf, .ome.tif)
+* Nikon (.nd2, .tiff) with Deflate, JPEG, JPEG2000, LZW, Deflate, Raw, RLE	
+* Philips (.tif) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE		
+* Sakura (.svslide) with JPEG(sqlite2, sqlite3, mssql)
+* Menarini (.ini) with Raw
+* Motic (.mds) 
+* Zoomify (.zif) with JPEG, JPEG2000, LZW, Deflate, Raw, RLE
+* SmartZoom	(.szi) with JPEG, BMP
+* Objective Imaging / Glissano (.sws)
+* Perkin Elmer (.qptiff)
+
+The most up to date list with supported file formats can be found at
+http://free.pathomation.com/formats
+
+## Installation from source
+To install from pypi
+```sh
+pip install pma_python
+```
+To upgrade an already existing version from pypi
+```sh
+pip install --upgrade pma_python
+```
+
+## How to use
+```python
+>>> from pma_python import *
+```

{pma_python-2.0.0.174 → pma_python-2.0.0.176}/pma_python/__init__.py

@@ -1,6 +1,6 @@
-from .version import *
-from .pma import *
-from .core import *
-from .core_admin import *
-from .control import *
-from .view import *
+from .version import *
+from .pma import *
+from .core import *
+from .core_admin import *
+from .control import *
+from .view import *