plotfig 1.6.0__tar.gz → 1.6.1__tar.gz

plotfig-1.6.1/.release-please-manifest.json

@@ -0,0 +1 @@
+{".":"1.6.1"}

{plotfig-1.6.0 → plotfig-1.6.1}/CHANGELOG.md

@@ -1,5 +1,12 @@
 # Changelog
 
+## [1.6.1](https://github.com/RicardoRyn/plotfig/compare/v1.6.0...v1.6.1) (2025-09-07)
+
+
+### Bug Fixes 🔧
+
+* **circos:** prevent type warning from type annotations ([b3552da](https://github.com/RicardoRyn/plotfig/commit/b3552dafd21fe72d9a294e0a52b8dc286d6a108e))
+
 ## [1.6.0](https://github.com/RicardoRyn/plotfig/compare/v1.5.1...v1.6.0) (2025-09-06)
 
 

{plotfig-1.6.0 → plotfig-1.6.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: plotfig
-Version: 1.6.0
+Version: 1.6.1
 Summary: Scientific plotting package for Cognitive neuroscience
 Author-email: Ricardo Ryn <ricardoRyn1317@gmail.com>
 License-File: LICENSE

{plotfig-1.6.0 → plotfig-1.6.1}/docs/usage/circos.md

@@ -8,7 +8,7 @@
 
 ```python
 from plotfig import plot_circos_figure
-from plotfig.utils.utils import gen_symmetric_matrix
+from plotfig.utils import gen_symmetric_matrix
 
 # 随机生成对称加权矩阵（对角线为0）
 connectome = gen_symmetric_matrix(30, mode="nonneg", sparsity=0.1)
@@ -33,7 +33,7 @@ fig = plot_circos_figure(connectome)
 
 ```python
 from plotfig import plot_circos_figure
-from plotfig.utils.utils import gen_symmetric_matrix
+from plotfig.utils import gen_symmetric_matrix
 
 # 随机生成一个10x10的对称加权矩阵（对角线为0）
 connectome = gen_symmetric_matrix(10, mode="nonneg", sparsity=0.2)
@@ -77,7 +77,7 @@ fig = plot_circos_figure(
 ```python
 import matplotlib.pyplot as plt
 from plotfig import plot_circos_figure
-from plotfig.utils.utils import gen_symmetric_matrix
+from plotfig.utils import gen_symmetric_matrix
 
 fig = plt.figure(figsize=(6, 3))
 
@@ -106,7 +106,7 @@ ax2 = plot_circos_figure(connectome, ax=ax2)
 ```python
 import matplotlib.pyplot as plt
 from plotfig import plot_circos_figure
-from plotfig.utils.utils import gen_symmetric_matrix
+from plotfig.utils import gen_symmetric_matrix
 
 fig = plt.figure(figsize=(7, 3))
 ax1 = fig.add_subplot(1, 2, 1, projection="polar")
@@ -135,7 +135,7 @@ ax2 = plot_circos_figure(connectome, symmetric=False, ax=ax2)
 ```python
 import matplotlib.pyplot as plt
 from plotfig import plot_circos_figure
-from plotfig.utils.utils import gen_symmetric_matrix
+from plotfig.utils import gen_symmetric_matrix
 
 fig = plt.figure(figsize=(12, 3), layout="constrained")
 ax1 = fig.add_subplot(1, 3, 1, projection="polar")
@@ -167,7 +167,7 @@ ax3 = plot_circos_figure(connectome, ax=ax3, edge_color="blue")
 ```python
 import matplotlib.pyplot as plt
 from plotfig import plot_circos_figure
-from plotfig.utils.utils import gen_symmetric_matrix
+from plotfig.utils import gen_symmetric_matrix
 
 fig = plt.figure(figsize=(12, 3), layout="constrained")
 ax1 = fig.add_subplot(1, 3, 1, projection="polar")
@@ -195,7 +195,7 @@ ax3 = plot_circos_figure(connectome, ax=ax3, cmap="bwr")
 
 ```python
 from plotfig import plot_circos_figure
-from plotfig.utils.utils import gen_symmetric_matrix
+from plotfig.utils import gen_symmetric_matrix
 
 # 生成带负值的对称矩阵
 connectome = gen_symmetric_matrix(10, mode="all", sparsity=0.1)
@@ -207,7 +207,7 @@ fig = plot_circos_figure(connectome)
 ```
 
     2025-09-05 15:09:37.347 | WARNING  | plotfig.circos:plot_circos_figure:116 - 由于 connectome 存在负值，连线颜色无法自定义，只能正值显示红色，负值显示蓝色
-
+    
 
 
     

{plotfig-1.6.0 → plotfig-1.6.1}/notebooks/circos.ipynb

@@ -143,7 +143,6 @@
     "ax1.plot([1, 2, 3, 4], [2, 1, 4, 3])\n",
     "\n",
     "ax2 = fig.add_subplot(1, 2, 2, projection=\"polar\")\n",
-    "print(type(ax2))\n",
     "connectome = gen_symmetric_matrix(10, mode=\"nonneg\", sparsity=0.1)\n",
     "ax2 = plot_circos_figure(connectome, ax=ax2)\n",
     "\n",

{plotfig-1.6.0 → plotfig-1.6.1}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "plotfig"
-version = "1.6.0"
+version = "1.6.1"
 description = "Scientific plotting package for Cognitive neuroscience"
 keywords = ["neuroscience", "plotting", "visualization"]
 readme = "README.md"

{plotfig-1.6.0 → plotfig-1.6.1}/src/plotfig/circos.py

@@ -8,6 +8,7 @@ import matplotlib.colors as mcolors
 import matplotlib.pyplot as plt
 from matplotlib.figure import Figure
 from matplotlib.projections.polar import PolarAxes
+from matplotlib.axes import Axes
 from pycirclize import Circos
 from loguru import logger
 
@@ -88,7 +89,7 @@ def _process_sym(
 
 def plot_circos_figure(
     connectome: NDArray,
-    ax: PolarAxes | None = None,
+    ax: Axes | None = None,
     symmetric: bool = True,
     node_names: list[str] | None = None,
     node_colors: list[str] | None = None,
@@ -229,5 +230,8 @@ def plot_circos_figure(
         fig = circos.plotfig()
         return fig
     else:
-        circos.plotfig(ax=ax)
-        return ax
+        if isinstance(ax, PolarAxes):
+            circos.plotfig(ax=ax)
+            return ax
+        else:
+            raise ValueError("ax 不是 PolarAxes 类型")

{plotfig-1.6.0 → plotfig-1.6.1}/uv.lock

@@ -1413,7 +1413,7 @@ wheels = [
 
 [[package]]
 name = "plotfig"
-version = "1.5.1"
+version = "1.6.0"
 source = { editable = "." }
 dependencies = [
     { name = "kaleido" },

plotfig-1.6.0/.release-please-manifest.json

@@ -1 +0,0 @@
-{".":"1.6.0"}