plotfig 0.1.0__tar.gz → 0.2.1__tar.gz

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Files changed (85) hide show
  1. {plotfig-0.1.0 → plotfig-0.2.1}/PKG-INFO +1 -1
  2. {plotfig-0.1.0 → plotfig-0.2.1}/plotfig.egg-info/PKG-INFO +1 -1
  3. {plotfig-0.1.0 → plotfig-0.2.1}/plotfig.egg-info/SOURCES.txt +9 -4
  4. {plotfig-0.1.0 → plotfig-0.2.1}/pyproject.toml +2 -2
  5. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/__init__.py +7 -9
  6. plotfig-0.2.1/src/plotfig/bar.py +603 -0
  7. plotfig-0.1.0/src/plotfig/brain_connection_plot.py → plotfig-0.2.1/src/plotfig/brain_connection.py +14 -12
  8. plotfig-0.1.0/src/plotfig/brain_surface_plot.py → plotfig-0.2.1/src/plotfig/brain_surface.py +23 -1
  9. plotfig-0.2.1/src/plotfig/circos.py +286 -0
  10. plotfig-0.2.1/src/plotfig/correlation.py +198 -0
  11. plotfig-0.2.1/src/plotfig/data/atlas_tables/macaque_d99.csv +299 -0
  12. plotfig-0.2.1/src/plotfig/data/neurodata/atlases/macaque_D99/L.d99.label.gii +357 -0
  13. plotfig-0.2.1/src/plotfig/data/neurodata/atlases/macaque_D99/R.d99.label.gii +357 -0
  14. plotfig-0.2.1/src/plotfig/matrix.py +114 -0
  15. plotfig-0.1.0/src/plotfig/circos_plot.py +0 -208
  16. plotfig-0.1.0/src/plotfig/common_plot.py +0 -784
  17. {plotfig-0.1.0 → plotfig-0.2.1}/LICENSE +0 -0
  18. {plotfig-0.1.0 → plotfig-0.2.1}/README.md +0 -0
  19. {plotfig-0.1.0 → plotfig-0.2.1}/plotfig.egg-info/dependency_links.txt +0 -0
  20. {plotfig-0.1.0 → plotfig-0.2.1}/plotfig.egg-info/requires.txt +0 -0
  21. {plotfig-0.1.0 → plotfig-0.2.1}/plotfig.egg-info/top_level.txt +0 -0
  22. {plotfig-0.1.0 → plotfig-0.2.1}/setup.cfg +0 -0
  23. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/chimpanzee_bna.csv +0 -0
  24. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/human_bna.csv +0 -0
  25. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/human_glasser.csv +0 -0
  26. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_bna.csv +0 -0
  27. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_charm5.csv +0 -0
  28. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_charm5_add_13_sgms.csv +0 -0
  29. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_charm6.csv +0 -0
  30. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/chimpanzee_BNA/ChimpBNA.L.32k_fs_LR.label.gii +0 -0
  31. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/chimpanzee_BNA/ChimpBNA.R.32k_fs_LR.label.gii +0 -0
  32. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_BNA/fsaverage.L.BNA.32k_fs_LR.label.gii +0 -0
  33. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_BNA/fsaverage.R.BNA.32k_fs_LR.label.gii +0 -0
  34. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_Glasser/fsaverage.L.Glasser.32k_fs_LR.label.gii +0 -0
  35. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_Glasser/fsaverage.R.Glasser.32k_fs_LR.label.gii +0 -0
  36. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_BNA/MBNA_124_32k_L.label.gii +0 -0
  37. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_BNA/MBNA_124_32k_R.label.gii +0 -0
  38. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM5/L.charm5.label.gii +0 -0
  39. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM5/R.charm5.label.gii +0 -0
  40. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM6/L.charm6.label.gii +0 -0
  41. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM6/R.charm6.label.gii +0 -0
  42. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.L.midthickness.32k_fs_LR.surf.gii +0 -0
  43. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.L.veryinflated.32k_fs_LR.surf.gii +0 -0
  44. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.R.midthickness.32k_fs_LR.surf.gii +0 -0
  45. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.R.veryinflated.32k_fs_LR.surf.gii +0 -0
  46. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/README.md +0 -0
  47. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_desc-nomedialwall_dparc.label.gii +0 -0
  48. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_desc-sulc_midthickness.shape.gii +0 -0
  49. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_desc-vaavg_midthickness.shape.gii +0 -0
  50. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_inflated.surf.gii +0 -0
  51. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_midthickness.surf.gii +0 -0
  52. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_sphere.surf.gii +0 -0
  53. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_veryinflated.surf.gii +0 -0
  54. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_desc-nomedialwall_dparc.label.gii +0 -0
  55. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_desc-sulc_midthickness.shape.gii +0 -0
  56. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_desc-vaavg_midthickness.shape.gii +0 -0
  57. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_inflated.surf.gii +0 -0
  58. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_midthickness.surf.gii +0 -0
  59. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_sphere.surf.gii +0 -0
  60. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_veryinflated.surf.gii +0 -0
  61. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_space-fsaverage_den-32k_hemi-L_sphere.surf.gii +0 -0
  62. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_space-fsaverage_den-32k_hemi-R_sphere.surf.gii +0 -0
  63. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.inflated.32k_fs_LR.surf.gii +0 -0
  64. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.midthickness.32k_fs_LR.surf.gii +0 -0
  65. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.pial.32k_fs_LR.surf.gii +0 -0
  66. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.veryinflated.32k_fs_LR.surf.gii +0 -0
  67. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.white.32k_fs_LR.surf.gii +0 -0
  68. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.inflated.32k_fs_LR.surf.gii +0 -0
  69. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.midthickness.32k_fs_LR.surf.gii +0 -0
  70. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.pial.32k_fs_LR.surf.gii +0 -0
  71. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.veryinflated.32k_fs_LR.surf.gii +0 -0
  72. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.white.32k_fs_LR.surf.gii +0 -0
  73. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.gray_surface.inf_300.surf.gii +0 -0
  74. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.gray_surface.surf.gii +0 -0
  75. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.mid_surface.inf_300.surf.gii +0 -0
  76. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.mid_surface.surf.gii +0 -0
  77. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.white_surface.inf_300.surf.gii +0 -0
  78. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.white_surface.surf.gii +0 -0
  79. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.gray_surface.inf_300.surf.gii +0 -0
  80. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.gray_surface.surf.gii +0 -0
  81. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.mid_surface.inf_300.surf.gii +0 -0
  82. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.mid_surface.surf.gii +0 -0
  83. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.white_surface.inf_300.surf.gii +0 -0
  84. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.white_surface.surf.gii +0 -0
  85. {plotfig-0.1.0 → plotfig-0.2.1}/src/plotfig/data/neurodata/volumes/macaque_NMT2/CHARM5_add_13_sgms_asym.nii.gz +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: plotfig
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- Version: 0.1.0
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+ Version: 0.2.1
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  Summary: Scientific plotting package for Cognitive neuroscience
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  Author-email: Ricardo Ryn <ricardoRyn1317@gmail.com>
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  Keywords: neuroscience,plotting,visualization
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: plotfig
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- Version: 0.1.0
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+ Version: 0.2.1
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  Summary: Scientific plotting package for Cognitive neuroscience
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  Author-email: Ricardo Ryn <ricardoRyn1317@gmail.com>
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  Keywords: neuroscience,plotting,visualization
@@ -7,10 +7,12 @@ plotfig.egg-info/dependency_links.txt
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  plotfig.egg-info/requires.txt
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  plotfig.egg-info/top_level.txt
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  src/plotfig/__init__.py
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- src/plotfig/brain_connection_plot.py
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- src/plotfig/brain_surface_plot.py
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- src/plotfig/circos_plot.py
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- src/plotfig/common_plot.py
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+ src/plotfig/bar.py
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+ src/plotfig/brain_connection.py
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+ src/plotfig/brain_surface.py
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+ src/plotfig/circos.py
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+ src/plotfig/correlation.py
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+ src/plotfig/matrix.py
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  src/plotfig/data/atlas_tables/chimpanzee_bna.csv
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  src/plotfig/data/atlas_tables/human_bna.csv
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  src/plotfig/data/atlas_tables/human_glasser.csv
@@ -18,6 +20,7 @@ src/plotfig/data/atlas_tables/macaque_bna.csv
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  src/plotfig/data/atlas_tables/macaque_charm5.csv
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  src/plotfig/data/atlas_tables/macaque_charm5_add_13_sgms.csv
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  src/plotfig/data/atlas_tables/macaque_charm6.csv
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+ src/plotfig/data/atlas_tables/macaque_d99.csv
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  src/plotfig/data/neurodata/atlases/chimpanzee_BNA/ChimpBNA.L.32k_fs_LR.label.gii
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  src/plotfig/data/neurodata/atlases/chimpanzee_BNA/ChimpBNA.R.32k_fs_LR.label.gii
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  src/plotfig/data/neurodata/atlases/human_BNA/fsaverage.L.BNA.32k_fs_LR.label.gii
@@ -30,6 +33,8 @@ src/plotfig/data/neurodata/atlases/macaque_CHARM5/L.charm5.label.gii
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  src/plotfig/data/neurodata/atlases/macaque_CHARM5/R.charm5.label.gii
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  src/plotfig/data/neurodata/atlases/macaque_CHARM6/L.charm6.label.gii
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  src/plotfig/data/neurodata/atlases/macaque_CHARM6/R.charm6.label.gii
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+ src/plotfig/data/neurodata/atlases/macaque_D99/L.d99.label.gii
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+ src/plotfig/data/neurodata/atlases/macaque_D99/R.d99.label.gii
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  src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.L.midthickness.32k_fs_LR.surf.gii
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  src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.L.veryinflated.32k_fs_LR.surf.gii
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  src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.R.midthickness.32k_fs_LR.surf.gii
@@ -1,6 +1,6 @@
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  [project]
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  name = "plotfig"
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- version = "0.1.0"
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+ version = "0.2.1"
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  description = "Scientific plotting package for Cognitive neuroscience"
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  keywords = ["neuroscience", "plotting", "visualization"]
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  readme = "README.md"
@@ -46,7 +46,7 @@ exclude = [
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  [tool.commitizen]
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  name = "cz_conventional_commits"
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- tag_format = "0.1.0"
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+ tag_format = "v$version"
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  version_scheme = "pep440"
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  version_provider = "pep621"
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  update_changelog_on_bump = true
@@ -1,10 +1,8 @@
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- from .common_plot import (
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- plot_one_group_bar_figure,
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- plot_one_group_violin_figure,
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- plot_correlation_figure,
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- plot_matrix_figure,
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- )
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- from .brain_surface_plot import (
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+ from .bar import (plot_one_group_bar_figure, plot_one_group_violin_figure, plot_multi_group_bar_figure)
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+ from .correlation import plot_correlation_figure
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+ from .matrix import plot_matrix_figure
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+ from .circos import plot_symmetric_circle_figure, plot_asymmetric_circle_figure
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+ from .brain_surface import (
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  plot_human_brain_figure,
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  plot_human_hemi_brain_figure,
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  plot_macaque_brain_figure,
@@ -12,12 +10,12 @@ from .brain_surface_plot import (
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  plot_chimpanzee_brain_figure,
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  plot_chimpanzee_hemi_brain_figure,
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  )
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- from .circos_plot import plot_symmetric_circle_figure, plot_asymmetric_circle_figure
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- from .brain_connection_plot import plot_brain_connection_figure
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+ from .brain_connection import plot_brain_connection_figure
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  __all__ = [
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  "plot_one_group_bar_figure",
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  "plot_one_group_violin_figure",
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+ "plot_multi_group_bar_figure",
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  "plot_correlation_figure",
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  "plot_matrix_figure",
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  "plot_human_brain_figure",