plotfig 0.0.7__tar.gz → 0.2.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {plotfig-0.0.7 → plotfig-0.2.1}/PKG-INFO +1 -2
- {plotfig-0.0.7 → plotfig-0.2.1}/plotfig.egg-info/PKG-INFO +1 -2
- {plotfig-0.0.7 → plotfig-0.2.1}/plotfig.egg-info/SOURCES.txt +9 -4
- {plotfig-0.0.7 → plotfig-0.2.1}/plotfig.egg-info/requires.txt +0 -1
- {plotfig-0.0.7 → plotfig-0.2.1}/pyproject.toml +53 -46
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/__init__.py +7 -9
- plotfig-0.2.1/src/plotfig/bar.py +603 -0
- plotfig-0.0.7/src/plotfig/brain_connection_plot.py → plotfig-0.2.1/src/plotfig/brain_connection.py +14 -12
- plotfig-0.0.7/src/plotfig/brain_surface_plot.py → plotfig-0.2.1/src/plotfig/brain_surface.py +23 -1
- plotfig-0.2.1/src/plotfig/circos.py +286 -0
- plotfig-0.2.1/src/plotfig/correlation.py +198 -0
- plotfig-0.2.1/src/plotfig/data/atlas_tables/macaque_d99.csv +299 -0
- plotfig-0.2.1/src/plotfig/data/neurodata/atlases/macaque_D99/L.d99.label.gii +357 -0
- plotfig-0.2.1/src/plotfig/data/neurodata/atlases/macaque_D99/R.d99.label.gii +357 -0
- plotfig-0.2.1/src/plotfig/matrix.py +114 -0
- plotfig-0.0.7/src/plotfig/circos_plot.py +0 -208
- plotfig-0.0.7/src/plotfig/common_plot.py +0 -784
- {plotfig-0.0.7 → plotfig-0.2.1}/LICENSE +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/README.md +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/plotfig.egg-info/dependency_links.txt +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/plotfig.egg-info/top_level.txt +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/setup.cfg +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/chimpanzee_bna.csv +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/human_bna.csv +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/human_glasser.csv +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_bna.csv +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_charm5.csv +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_charm5_add_13_sgms.csv +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/atlas_tables/macaque_charm6.csv +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/chimpanzee_BNA/ChimpBNA.L.32k_fs_LR.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/chimpanzee_BNA/ChimpBNA.R.32k_fs_LR.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_BNA/fsaverage.L.BNA.32k_fs_LR.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_BNA/fsaverage.R.BNA.32k_fs_LR.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_Glasser/fsaverage.L.Glasser.32k_fs_LR.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/human_Glasser/fsaverage.R.Glasser.32k_fs_LR.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_BNA/MBNA_124_32k_L.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_BNA/MBNA_124_32k_R.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM5/L.charm5.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM5/R.charm5.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM6/L.charm6.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/atlases/macaque_CHARM6/R.charm6.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.L.midthickness.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.L.veryinflated.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.R.midthickness.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/chimpanzee_BNA/ChimpYerkes29_v1.2.R.veryinflated.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/README.md +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_desc-nomedialwall_dparc.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_desc-sulc_midthickness.shape.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_desc-vaavg_midthickness.shape.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_inflated.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_midthickness.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_sphere.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-L_veryinflated.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_desc-nomedialwall_dparc.label.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_desc-sulc_midthickness.shape.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_desc-vaavg_midthickness.shape.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_inflated.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_midthickness.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_sphere.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_den-32k_hemi-R_veryinflated.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_space-fsaverage_den-32k_hemi-L_sphere.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/human_fsLR/tpl-fsLR_space-fsaverage_den-32k_hemi-R_sphere.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.inflated.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.midthickness.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.pial.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.veryinflated.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.L.white.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.inflated.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.midthickness.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.pial.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.veryinflated.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_BNA/civm.R.white.32k_fs_LR.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.gray_surface.inf_300.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.gray_surface.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.mid_surface.inf_300.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.mid_surface.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.white_surface.inf_300.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/L.white_surface.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.gray_surface.inf_300.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.gray_surface.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.mid_surface.inf_300.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.mid_surface.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.white_surface.inf_300.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/surfaces/macaque_NMT2/R.white_surface.surf.gii +0 -0
- {plotfig-0.0.7 → plotfig-0.2.1}/src/plotfig/data/neurodata/volumes/macaque_NMT2/CHARM5_add_13_sgms_asym.nii.gz +0 -0
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"mne-connectivity>=0.7.0",
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|
14
|
+
"nibabel>=5.3.2",
|
|
15
|
+
"numpy>=2.2.4",
|
|
16
|
+
"pandas>=2.2.3",
|
|
17
|
+
"plotly>=6.0.1",
|
|
18
|
+
"scipy>=1.15.2",
|
|
19
|
+
"surfplot>=0.2.0",
|
|
20
|
+
]
|
|
21
|
+
|
|
22
|
+
[dependency-groups]
|
|
23
|
+
dev = [
|
|
24
|
+
"joblib>=1.4.2",
|
|
25
|
+
]
|
|
26
|
+
|
|
27
|
+
[build-system]
|
|
28
|
+
requires = ["setuptools>=42", "wheel"]
|
|
29
|
+
build-backend = "setuptools.build_meta"
|
|
30
|
+
|
|
31
|
+
[tool.setuptools]
|
|
32
|
+
package-dir = {"plotfig" = "src/plotfig"}
|
|
33
|
+
packages = ["plotfig"]
|
|
34
|
+
include-package-data = true
|
|
35
|
+
|
|
36
|
+
[tool.setuptools.package-data]
|
|
37
|
+
plotfig = [
|
|
38
|
+
"data/atlas_tables/**/*",
|
|
39
|
+
"data/neurodata/**/*"
|
|
40
|
+
]
|
|
41
|
+
|
|
42
|
+
[tool.ruff]
|
|
43
|
+
exclude = [
|
|
44
|
+
"examples/example.ipynb"
|
|
45
|
+
]
|
|
46
|
+
|
|
47
|
+
[tool.commitizen]
|
|
48
|
+
name = "cz_conventional_commits"
|
|
49
|
+
tag_format = "v$version"
|
|
50
|
+
version_scheme = "pep440"
|
|
51
|
+
version_provider = "pep621"
|
|
52
|
+
update_changelog_on_bump = true
|
|
53
|
+
major_version_zero = true
|
|
@@ -1,10 +1,8 @@
|
|
|
1
|
-
from .
|
|
2
|
-
|
|
3
|
-
|
|
4
|
-
|
|
5
|
-
|
|
6
|
-
)
|
|
7
|
-
from .brain_surface_plot import (
|
|
1
|
+
from .bar import (plot_one_group_bar_figure, plot_one_group_violin_figure, plot_multi_group_bar_figure)
|
|
2
|
+
from .correlation import plot_correlation_figure
|
|
3
|
+
from .matrix import plot_matrix_figure
|
|
4
|
+
from .circos import plot_symmetric_circle_figure, plot_asymmetric_circle_figure
|
|
5
|
+
from .brain_surface import (
|
|
8
6
|
plot_human_brain_figure,
|
|
9
7
|
plot_human_hemi_brain_figure,
|
|
10
8
|
plot_macaque_brain_figure,
|
|
@@ -12,12 +10,12 @@ from .brain_surface_plot import (
|
|
|
12
10
|
plot_chimpanzee_brain_figure,
|
|
13
11
|
plot_chimpanzee_hemi_brain_figure,
|
|
14
12
|
)
|
|
15
|
-
from .
|
|
16
|
-
from .brain_connection_plot import plot_brain_connection_figure
|
|
13
|
+
from .brain_connection import plot_brain_connection_figure
|
|
17
14
|
|
|
18
15
|
__all__ = [
|
|
19
16
|
"plot_one_group_bar_figure",
|
|
20
17
|
"plot_one_group_violin_figure",
|
|
18
|
+
"plot_multi_group_bar_figure",
|
|
21
19
|
"plot_correlation_figure",
|
|
22
20
|
"plot_matrix_figure",
|
|
23
21
|
"plot_human_brain_figure",
|