plotastrodata 1.0.3__tar.gz → 1.0.5__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/PKG-INFO +14 -8
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/README.md +13 -6
- plotastrodata-1.0.5/plotastrodata/__init__.py +5 -0
- plotastrodata-1.0.5/plotastrodata/const_utils.py +83 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata/other_utils.py +5 -8
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata.egg-info/PKG-INFO +14 -8
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata.egg-info/SOURCES.txt +1 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata.egg-info/requires.txt +0 -1
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/setup.cfg +0 -1
- plotastrodata-1.0.3/plotastrodata/__init__.py +0 -5
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/LICENSE +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata/analysis_utils.py +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata/fft_utils.py +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata/fits_utils.py +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata/fitting_utils.py +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata/los_utils.py +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata/plot_utils.py +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata.egg-info/dependency_links.txt +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata.egg-info/not-zip-safe +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/plotastrodata.egg-info/top_level.txt +0 -0
- {plotastrodata-1.0.3 → plotastrodata-1.0.5}/setup.py +0 -0
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.1
|
|
2
2
|
Name: plotastrodata
|
|
3
|
-
Version: 1.0.
|
|
3
|
+
Version: 1.0.5
|
|
4
4
|
Summary: plotastrodata can be used mainly to make figures from FITS files, as well as other analyses in astronomy.
|
|
5
5
|
Home-page: https://github.com/yusukeaso-astron/plotastrodata
|
|
6
6
|
Download-URL: https://github.com/yusukeaso-astron/plotastrodata
|
|
@@ -13,7 +13,6 @@ License-File: LICENSE
|
|
|
13
13
|
Requires-Dist: astropy
|
|
14
14
|
Requires-Dist: corner
|
|
15
15
|
Requires-Dist: dynesty
|
|
16
|
-
Requires-Dist: ffmpeg
|
|
17
16
|
Requires-Dist: matplotlib
|
|
18
17
|
Requires-Dist: multiprocess
|
|
19
18
|
Requires-Dist: numpy
|
|
@@ -29,18 +28,25 @@ Python package to make figures from radio astronomical data by astropy and matpl
|
|
|
29
28
|
|
|
30
29
|
|
|
31
30
|
## Demo and Usage
|
|
32
|
-
|
|
33
|
-
|
|
31
|
+
For the installation, conda and are available.
|
|
32
|
+
```bash
|
|
33
|
+
conda install conda-forge::plotastrodata
|
|
34
|
+
```
|
|
35
|
+
or
|
|
36
|
+
```bash
|
|
37
|
+
pip install plotastrodata
|
|
38
|
+
```
|
|
39
|
+
The following is the way to install plotastrodata manually. The file example.py will help you find out how to use this package.
|
|
34
40
|
```bash
|
|
35
41
|
git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
36
42
|
cd plotastrodata
|
|
37
43
|
python example.py
|
|
38
44
|
```
|
|
39
|
-
To keep the package updated, type the command below in the directory plotastrodata
|
|
45
|
+
To keep the package updated, always type the command below in the directory plotastrodata before you use it.
|
|
40
46
|
```bash
|
|
41
47
|
git pull
|
|
42
48
|
```
|
|
43
|
-
Also, setting the path in .bashrc (or .zshrc etc.) will be useful.
|
|
49
|
+
Also, setting the path in .bashrc (or .zshrc, etc.) will be useful.
|
|
44
50
|
```bash
|
|
45
51
|
export PYTHONPATH=${PYTHONPATH}:/YOUR_PATH_TO/plotastrodata
|
|
46
52
|
```
|
|
@@ -94,7 +100,7 @@ git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
|
94
100
|
|
|
95
101
|
## Note
|
|
96
102
|
|
|
97
|
-
* For 3D data, a 1D velocity array or a FITS file with a velocity axis must be given to set up channels
|
|
103
|
+
* For 3D data, a 1D velocity array or a FITS file with a velocity axis must be given to set up channels on each page.
|
|
98
104
|
* For 2D/3D data, the spatial center can be read from a FITS file or manually given.
|
|
99
105
|
* len(v)=1 (default) means to make a 2D figure.
|
|
100
106
|
* Spatial lengths are in the unit of arcsec, or au if dist (!= 1) is given.
|
|
@@ -102,7 +108,7 @@ git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
|
102
108
|
* For region, line, arrow, label, and marker, a single input can be treated without a list, e.g., anglelist=60, as well as anglelist=[60].
|
|
103
109
|
* Each element of poslist supposes a text coordinate like '01h23m45.6s 01d23m45.6s' or a list of relative x and y like [0.2, 0.3] (0 is left or bottom, 1 is right or top).
|
|
104
110
|
* Parameters for original methods in matplotlib.axes.Axes can be used as kwargs; see the default kwargs0 for reference.
|
|
105
|
-
* Position-velocity diagrams (pv=True)
|
|
111
|
+
* Position-velocity diagrams (pv=True) do not yet support region, line, arrow, and segment because the units of abscissa and ordinate are different.
|
|
106
112
|
|
|
107
113
|
## Author
|
|
108
114
|
|
|
@@ -3,18 +3,25 @@ Python package to make figures from radio astronomical data by astropy and matpl
|
|
|
3
3
|
|
|
4
4
|
|
|
5
5
|
## Demo and Usage
|
|
6
|
-
|
|
7
|
-
|
|
6
|
+
For the installation, conda and are available.
|
|
7
|
+
```bash
|
|
8
|
+
conda install conda-forge::plotastrodata
|
|
9
|
+
```
|
|
10
|
+
or
|
|
11
|
+
```bash
|
|
12
|
+
pip install plotastrodata
|
|
13
|
+
```
|
|
14
|
+
The following is the way to install plotastrodata manually. The file example.py will help you find out how to use this package.
|
|
8
15
|
```bash
|
|
9
16
|
git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
10
17
|
cd plotastrodata
|
|
11
18
|
python example.py
|
|
12
19
|
```
|
|
13
|
-
To keep the package updated, type the command below in the directory plotastrodata
|
|
20
|
+
To keep the package updated, always type the command below in the directory plotastrodata before you use it.
|
|
14
21
|
```bash
|
|
15
22
|
git pull
|
|
16
23
|
```
|
|
17
|
-
Also, setting the path in .bashrc (or .zshrc etc.) will be useful.
|
|
24
|
+
Also, setting the path in .bashrc (or .zshrc, etc.) will be useful.
|
|
18
25
|
```bash
|
|
19
26
|
export PYTHONPATH=${PYTHONPATH}:/YOUR_PATH_TO/plotastrodata
|
|
20
27
|
```
|
|
@@ -68,7 +75,7 @@ git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
|
68
75
|
|
|
69
76
|
## Note
|
|
70
77
|
|
|
71
|
-
* For 3D data, a 1D velocity array or a FITS file with a velocity axis must be given to set up channels
|
|
78
|
+
* For 3D data, a 1D velocity array or a FITS file with a velocity axis must be given to set up channels on each page.
|
|
72
79
|
* For 2D/3D data, the spatial center can be read from a FITS file or manually given.
|
|
73
80
|
* len(v)=1 (default) means to make a 2D figure.
|
|
74
81
|
* Spatial lengths are in the unit of arcsec, or au if dist (!= 1) is given.
|
|
@@ -76,7 +83,7 @@ git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
|
76
83
|
* For region, line, arrow, label, and marker, a single input can be treated without a list, e.g., anglelist=60, as well as anglelist=[60].
|
|
77
84
|
* Each element of poslist supposes a text coordinate like '01h23m45.6s 01d23m45.6s' or a list of relative x and y like [0.2, 0.3] (0 is left or bottom, 1 is right or top).
|
|
78
85
|
* Parameters for original methods in matplotlib.axes.Axes can be used as kwargs; see the default kwargs0 for reference.
|
|
79
|
-
* Position-velocity diagrams (pv=True)
|
|
86
|
+
* Position-velocity diagrams (pv=True) do not yet support region, line, arrow, and segment because the units of abscissa and ordinate are different.
|
|
80
87
|
|
|
81
88
|
## Author
|
|
82
89
|
|
|
@@ -0,0 +1,83 @@
|
|
|
1
|
+
from astropy import constants
|
|
2
|
+
from astropy import units
|
|
3
|
+
|
|
4
|
+
# astropy.units in the SI unit system
|
|
5
|
+
au = units.au.to('m')
|
|
6
|
+
pc = units.pc.to('m')
|
|
7
|
+
arcsec = units.arcsec.to('radian')
|
|
8
|
+
Jy = units.Jy.to('J*s**(-1)*m**(-2)*Hz**(-1)')
|
|
9
|
+
deg = units.deg.to('radian')
|
|
10
|
+
year = units.year.to('s')
|
|
11
|
+
gauss = units.gauss.to('T')
|
|
12
|
+
cm = units.cm.to('m')
|
|
13
|
+
km = units.km.to('m')
|
|
14
|
+
gram = units.gram.to('kg')
|
|
15
|
+
debye = units.debye.to('A*s*m')
|
|
16
|
+
erg = units.erg.to('J')
|
|
17
|
+
|
|
18
|
+
# astropy.constants in the SI unit system
|
|
19
|
+
G = constants.G.si.value
|
|
20
|
+
N_A = constants.N_A.si.value
|
|
21
|
+
R = constants.R.si.value
|
|
22
|
+
Ryd = constants.Ryd.si.value
|
|
23
|
+
a0 = constants.a0.si.value
|
|
24
|
+
alpha = constants.alpha.si.value
|
|
25
|
+
atm = constants.atm.si.value
|
|
26
|
+
b_wien = constants.b_wien.si.value
|
|
27
|
+
c = constants.c.si.value
|
|
28
|
+
e = constants.e.si.value
|
|
29
|
+
eps0 = constants.eps0.si.value
|
|
30
|
+
g0 = constants.g0.si.value
|
|
31
|
+
h = constants.h.si.value
|
|
32
|
+
hbar = constants.hbar.si.value
|
|
33
|
+
k_B = constants.k_B.si.value
|
|
34
|
+
m_e = constants.m_e.si.value
|
|
35
|
+
m_n = constants.m_n.si.value
|
|
36
|
+
m_p = constants.m_p.si.value
|
|
37
|
+
mu0 = constants.mu0.si.value
|
|
38
|
+
muB = constants.muB.si.value
|
|
39
|
+
sigma_T = constants.sigma_T.si.value
|
|
40
|
+
sigma_sb = constants.sigma_sb.si.value
|
|
41
|
+
u = constants.u.si.value
|
|
42
|
+
GM_earth = constants.GM_earth.si.value
|
|
43
|
+
GM_jup = constants.GM_jup.si.value
|
|
44
|
+
GM_sun = constants.GM_sun.si.value
|
|
45
|
+
L_bol0 = constants.L_bol0.si.value
|
|
46
|
+
L_sun = constants.L_sun.si.value
|
|
47
|
+
M_earth = constants.M_earth.si.value
|
|
48
|
+
M_jup = constants.M_jup.si.value
|
|
49
|
+
M_sun = constants.M_sun.si.value
|
|
50
|
+
R_earth = constants.R_earth.si.value
|
|
51
|
+
R_jup = constants.R_jup.si.value
|
|
52
|
+
R_sun = constants.R_sun.si.value
|
|
53
|
+
kpc = constants.kpc.si.value
|
|
54
|
+
|
|
55
|
+
# Metric prefix
|
|
56
|
+
quetta = 1e30
|
|
57
|
+
ronna = 1e27
|
|
58
|
+
yotta = 1e24
|
|
59
|
+
zetta = 1e21
|
|
60
|
+
exa = 1e18
|
|
61
|
+
peta = 1e15
|
|
62
|
+
tera = 1e12
|
|
63
|
+
giga = 1e9
|
|
64
|
+
mega = 1e6
|
|
65
|
+
kilo = 1e3
|
|
66
|
+
hecto = 1e2
|
|
67
|
+
deca = 1e1
|
|
68
|
+
deci = 1e-1
|
|
69
|
+
centi = 1e-2
|
|
70
|
+
milli = 1e-3
|
|
71
|
+
micro = 1e-6
|
|
72
|
+
nano = 1e-9
|
|
73
|
+
pico = 1e-12
|
|
74
|
+
femto = 1e-15
|
|
75
|
+
atto = 1e-18
|
|
76
|
+
zepto = 1e-21
|
|
77
|
+
yocto = 1e-24
|
|
78
|
+
ronto = 1e-27
|
|
79
|
+
quecto = 1e-30
|
|
80
|
+
|
|
81
|
+
# Others
|
|
82
|
+
mumol = 2.37 * m_p # kg; Kauffmann et al. 2008, for sound speed
|
|
83
|
+
muH2 = 2.8 * m_p # kg; Kauffmann et al. 2008, for mass-H2 conversion
|
|
@@ -2,10 +2,12 @@ import subprocess
|
|
|
2
2
|
import shlex
|
|
3
3
|
import numpy as np
|
|
4
4
|
from astropy.coordinates import SkyCoord
|
|
5
|
-
from astropy import units
|
|
5
|
+
from astropy import units
|
|
6
6
|
from scipy.optimize import curve_fit
|
|
7
7
|
from scipy.special import erf
|
|
8
8
|
|
|
9
|
+
from plotastrodata import const_utils as cu
|
|
10
|
+
|
|
9
11
|
|
|
10
12
|
def terminal(cmd: str, **kwargs) -> None:
|
|
11
13
|
"""Run a terminal command through subprocess.run.
|
|
@@ -312,10 +314,7 @@ def BnuT(T: float = 30, nu: float = 230e9) -> float:
|
|
|
312
314
|
Returns:
|
|
313
315
|
float: Planck function in the SI units.
|
|
314
316
|
"""
|
|
315
|
-
|
|
316
|
-
cc = constants.c.si.value
|
|
317
|
-
k_B = constants.k_B.si.value
|
|
318
|
-
return 2 * hh * nu**3 / cc**2 / (np.exp(hh * nu / k_B / T) - 1)
|
|
317
|
+
return 2 * cu.h * nu**3 / cu.c**2 / (np.exp(cu.h * nu / cu.k_B / T) - 1)
|
|
319
318
|
|
|
320
319
|
|
|
321
320
|
def JnuT(T: float = 30, nu: float = 230e9) -> float:
|
|
@@ -328,9 +327,7 @@ def JnuT(T: float = 30, nu: float = 230e9) -> float:
|
|
|
328
327
|
Returns:
|
|
329
328
|
float: Brightness temperature of Planck function in the unit of K.
|
|
330
329
|
"""
|
|
331
|
-
|
|
332
|
-
k_B = constants.k_B.si.value
|
|
333
|
-
return hh * nu / k_B / (np.exp(hh * nu / k_B / T) - 1)
|
|
330
|
+
return cu.h * nu / cu.k_B / (np.exp(cu.h * nu / cu.k_B / T) - 1)
|
|
334
331
|
|
|
335
332
|
|
|
336
333
|
def gaussian2d(xy: np.ndarray,
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.1
|
|
2
2
|
Name: plotastrodata
|
|
3
|
-
Version: 1.0.
|
|
3
|
+
Version: 1.0.5
|
|
4
4
|
Summary: plotastrodata can be used mainly to make figures from FITS files, as well as other analyses in astronomy.
|
|
5
5
|
Home-page: https://github.com/yusukeaso-astron/plotastrodata
|
|
6
6
|
Download-URL: https://github.com/yusukeaso-astron/plotastrodata
|
|
@@ -13,7 +13,6 @@ License-File: LICENSE
|
|
|
13
13
|
Requires-Dist: astropy
|
|
14
14
|
Requires-Dist: corner
|
|
15
15
|
Requires-Dist: dynesty
|
|
16
|
-
Requires-Dist: ffmpeg
|
|
17
16
|
Requires-Dist: matplotlib
|
|
18
17
|
Requires-Dist: multiprocess
|
|
19
18
|
Requires-Dist: numpy
|
|
@@ -29,18 +28,25 @@ Python package to make figures from radio astronomical data by astropy and matpl
|
|
|
29
28
|
|
|
30
29
|
|
|
31
30
|
## Demo and Usage
|
|
32
|
-
|
|
33
|
-
|
|
31
|
+
For the installation, conda and are available.
|
|
32
|
+
```bash
|
|
33
|
+
conda install conda-forge::plotastrodata
|
|
34
|
+
```
|
|
35
|
+
or
|
|
36
|
+
```bash
|
|
37
|
+
pip install plotastrodata
|
|
38
|
+
```
|
|
39
|
+
The following is the way to install plotastrodata manually. The file example.py will help you find out how to use this package.
|
|
34
40
|
```bash
|
|
35
41
|
git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
36
42
|
cd plotastrodata
|
|
37
43
|
python example.py
|
|
38
44
|
```
|
|
39
|
-
To keep the package updated, type the command below in the directory plotastrodata
|
|
45
|
+
To keep the package updated, always type the command below in the directory plotastrodata before you use it.
|
|
40
46
|
```bash
|
|
41
47
|
git pull
|
|
42
48
|
```
|
|
43
|
-
Also, setting the path in .bashrc (or .zshrc etc.) will be useful.
|
|
49
|
+
Also, setting the path in .bashrc (or .zshrc, etc.) will be useful.
|
|
44
50
|
```bash
|
|
45
51
|
export PYTHONPATH=${PYTHONPATH}:/YOUR_PATH_TO/plotastrodata
|
|
46
52
|
```
|
|
@@ -94,7 +100,7 @@ git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
|
94
100
|
|
|
95
101
|
## Note
|
|
96
102
|
|
|
97
|
-
* For 3D data, a 1D velocity array or a FITS file with a velocity axis must be given to set up channels
|
|
103
|
+
* For 3D data, a 1D velocity array or a FITS file with a velocity axis must be given to set up channels on each page.
|
|
98
104
|
* For 2D/3D data, the spatial center can be read from a FITS file or manually given.
|
|
99
105
|
* len(v)=1 (default) means to make a 2D figure.
|
|
100
106
|
* Spatial lengths are in the unit of arcsec, or au if dist (!= 1) is given.
|
|
@@ -102,7 +108,7 @@ git clone https://github.com/yusukeaso-astron/plotastrodata
|
|
|
102
108
|
* For region, line, arrow, label, and marker, a single input can be treated without a list, e.g., anglelist=60, as well as anglelist=[60].
|
|
103
109
|
* Each element of poslist supposes a text coordinate like '01h23m45.6s 01d23m45.6s' or a list of relative x and y like [0.2, 0.3] (0 is left or bottom, 1 is right or top).
|
|
104
110
|
* Parameters for original methods in matplotlib.axes.Axes can be used as kwargs; see the default kwargs0 for reference.
|
|
105
|
-
* Position-velocity diagrams (pv=True)
|
|
111
|
+
* Position-velocity diagrams (pv=True) do not yet support region, line, arrow, and segment because the units of abscissa and ordinate are different.
|
|
106
112
|
|
|
107
113
|
## Author
|
|
108
114
|
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|