pinneapple 0.5.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (864) hide show
  1. pinneapple-0.5.0/.gitignore +32 -0
  2. pinneapple-0.5.0/LICENSE +168 -0
  3. pinneapple-0.5.0/NOTICE +2 -0
  4. pinneapple-0.5.0/PKG-INFO +511 -0
  5. pinneapple-0.5.0/README.md +355 -0
  6. pinneapple-0.5.0/pinneapple/__init__.py +657 -0
  7. pinneapple-0.5.0/pinneapple_adaptation/__init__.py +105 -0
  8. pinneapple-0.5.0/pinneapple_adaptation/meta_learning/__init__.py +112 -0
  9. pinneapple-0.5.0/pinneapple_adaptation/meta_learning/config.py +133 -0
  10. pinneapple-0.5.0/pinneapple_adaptation/meta_learning/maml.py +479 -0
  11. pinneapple-0.5.0/pinneapple_adaptation/meta_learning/meta_model.py +190 -0
  12. pinneapple-0.5.0/pinneapple_adaptation/meta_learning/reptile.py +293 -0
  13. pinneapple-0.5.0/pinneapple_adaptation/meta_learning/task_sampler.py +195 -0
  14. pinneapple-0.5.0/pinneapple_adaptation/transfer_learning/__init__.py +48 -0
  15. pinneapple-0.5.0/pinneapple_adaptation/transfer_learning/adapter.py +345 -0
  16. pinneapple-0.5.0/pinneapple_adaptation/transfer_learning/config.py +97 -0
  17. pinneapple-0.5.0/pinneapple_adaptation/transfer_learning/freeze.py +201 -0
  18. pinneapple-0.5.0/pinneapple_adaptation/transfer_learning/parametric.py +271 -0
  19. pinneapple-0.5.0/pinneapple_adaptation/transfer_learning/trainer.py +464 -0
  20. pinneapple-0.5.0/pinneapple_analysis/__init__.py +172 -0
  21. pinneapple-0.5.0/pinneapple_analysis/inspection/__init__.py +150 -0
  22. pinneapple-0.5.0/pinneapple_analysis/inspection/acoustic.py +226 -0
  23. pinneapple-0.5.0/pinneapple_analysis/inspection/base.py +250 -0
  24. pinneapple-0.5.0/pinneapple_analysis/inspection/eddy_current.py +280 -0
  25. pinneapple-0.5.0/pinneapple_analysis/inspection/emat.py +266 -0
  26. pinneapple-0.5.0/pinneapple_analysis/inspection/guided_wave_ultrasonic.py +209 -0
  27. pinneapple-0.5.0/pinneapple_analysis/inspection/magnetic_flux_leakage.py +307 -0
  28. pinneapple-0.5.0/pinneapple_analysis/inspection/phased_array_ultrasonic.py +204 -0
  29. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/__init__.py +200 -0
  30. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/counterfactual_attribution.py +151 -0
  31. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/ensemble_kalman.py +453 -0
  32. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/missing_term.py +499 -0
  33. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/noise_models.py +259 -0
  34. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/obs_operator.py +283 -0
  35. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/regularization.py +328 -0
  36. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/sensitivity.py +438 -0
  37. pinneapple-0.5.0/pinneapple_analysis/inverse_problems/solver.py +425 -0
  38. pinneapple-0.5.0/pinneapple_analysis/retrieval/__init__.py +57 -0
  39. pinneapple-0.5.0/pinneapple_analysis/retrieval/corpus.py +359 -0
  40. pinneapple-0.5.0/pinneapple_analysis/retrieval/index.py +132 -0
  41. pinneapple-0.5.0/pinneapple_analysis/state_estimation/__init__.py +44 -0
  42. pinneapple-0.5.0/pinneapple_analysis/state_estimation/kalman.py +297 -0
  43. pinneapple-0.5.0/pinneapple_analysis/trust/__init__.py +11 -0
  44. pinneapple-0.5.0/pinneapple_analysis/trust/trust_gate.py +176 -0
  45. pinneapple-0.5.0/pinneapple_analysis/uncertainty/__init__.py +93 -0
  46. pinneapple-0.5.0/pinneapple_analysis/uncertainty/aleatoric.py +153 -0
  47. pinneapple-0.5.0/pinneapple_analysis/uncertainty/calibration.py +287 -0
  48. pinneapple-0.5.0/pinneapple_analysis/uncertainty/conformal.py +261 -0
  49. pinneapple-0.5.0/pinneapple_analysis/uncertainty/core.py +264 -0
  50. pinneapple-0.5.0/pinneapple_analysis/uncertainty/decomposition.py +127 -0
  51. pinneapple-0.5.0/pinneapple_analysis/uncertainty/ensemble.py +250 -0
  52. pinneapple-0.5.0/pinneapple_analysis/uncertainty/mc_dropout.py +357 -0
  53. pinneapple-0.5.0/pinneapple_analysis/uncertainty/quantile.py +155 -0
  54. pinneapple-0.5.0/pinneapple_analysis/validation/__init__.py +57 -0
  55. pinneapple-0.5.0/pinneapple_analysis/validation/analytical.py +186 -0
  56. pinneapple-0.5.0/pinneapple_analysis/validation/boundary.py +254 -0
  57. pinneapple-0.5.0/pinneapple_analysis/validation/conservation.py +374 -0
  58. pinneapple-0.5.0/pinneapple_analysis/validation/core.py +174 -0
  59. pinneapple-0.5.0/pinneapple_analysis/validation/symmetry.py +279 -0
  60. pinneapple-0.5.0/pinneapple_analysis/validation/validator.py +356 -0
  61. pinneapple-0.5.0/pinneapple_analysis/verification/__init__.py +310 -0
  62. pinneapple-0.5.0/pinneapple_analysis/verification/architecture_critique.py +266 -0
  63. pinneapple-0.5.0/pinneapple_analysis/verification/architecture_recommendation.py +344 -0
  64. pinneapple-0.5.0/pinneapple_analysis/verification/causal_discrepancy.py +498 -0
  65. pinneapple-0.5.0/pinneapple_analysis/verification/convergence.py +430 -0
  66. pinneapple-0.5.0/pinneapple_analysis/verification/dimensional_analysis.py +174 -0
  67. pinneapple-0.5.0/pinneapple_analysis/verification/evidence_graph.py +234 -0
  68. pinneapple-0.5.0/pinneapple_analysis/verification/geometry_intelligence.py +755 -0
  69. pinneapple-0.5.0/pinneapple_analysis/verification/knowledge_graph.py +643 -0
  70. pinneapple-0.5.0/pinneapple_analysis/verification/mesh_intelligence.py +474 -0
  71. pinneapple-0.5.0/pinneapple_analysis/verification/physics_confidence_score.py +509 -0
  72. pinneapple-0.5.0/pinneapple_analysis/verification/provenance.py +66 -0
  73. pinneapple-0.5.0/pinneapple_analysis/verification/solver_orchestration.py +728 -0
  74. pinneapple-0.5.0/pinneapple_analysis/verification/tool_recommendation.py +600 -0
  75. pinneapple-0.5.0/pinneapple_analysis/verification/uncertainty_inverse.py +751 -0
  76. pinneapple-0.5.0/pinneapple_arena/__init__.py +146 -0
  77. pinneapple-0.5.0/pinneapple_arena/arena.py +570 -0
  78. pinneapple-0.5.0/pinneapple_arena/config.py +296 -0
  79. pinneapple-0.5.0/pinneapple_arena/custom_builder.py +660 -0
  80. pinneapple-0.5.0/pinneapple_arena/dataset_bench.py +722 -0
  81. pinneapple-0.5.0/pinneapple_arena/dataset_problems.py +519 -0
  82. pinneapple-0.5.0/pinneapple_arena/model_factory.py +327 -0
  83. pinneapple-0.5.0/pinneapple_arena/nas.py +446 -0
  84. pinneapple-0.5.0/pinneapple_arena/problems.py +1205 -0
  85. pinneapple-0.5.0/pinneapple_arena/trainer.py +579 -0
  86. pinneapple-0.5.0/pinneapple_arena/visualizer.py +451 -0
  87. pinneapple-0.5.0/pinneapple_blender/__init__.py +14 -0
  88. pinneapple-0.5.0/pinneapple_blender/blender_addon/import_pinneapple_sequence.py +94 -0
  89. pinneapple-0.5.0/pinneapple_blender/export.py +152 -0
  90. pinneapple-0.5.0/pinneapple_blender/render.py +60 -0
  91. pinneapple-0.5.0/pinneapple_data/__init__.py +116 -0
  92. pinneapple-0.5.0/pinneapple_data/active_learning.py +673 -0
  93. pinneapple-0.5.0/pinneapple_data/adapters/__init__.py +62 -0
  94. pinneapple-0.5.0/pinneapple_data/adapters/geom_adapter.py +286 -0
  95. pinneapple-0.5.0/pinneapple_data/adapters/pinn_batch_builders.py +148 -0
  96. pinneapple-0.5.0/pinneapple_data/adapters/splash_archive_adapter.py +314 -0
  97. pinneapple-0.5.0/pinneapple_data/adapters/upd_adapter.py +288 -0
  98. pinneapple-0.5.0/pinneapple_data/augmentation.py +138 -0
  99. pinneapple-0.5.0/pinneapple_data/cache.py +120 -0
  100. pinneapple-0.5.0/pinneapple_data/cache_bytes.py +179 -0
  101. pinneapple-0.5.0/pinneapple_data/chunking.py +112 -0
  102. pinneapple-0.5.0/pinneapple_data/collate.py +131 -0
  103. pinneapple-0.5.0/pinneapple_data/collocation.py +557 -0
  104. pinneapple-0.5.0/pinneapple_data/dataloaders.py +353 -0
  105. pinneapple-0.5.0/pinneapple_data/datasets/__init__.py +151 -0
  106. pinneapple-0.5.0/pinneapple_data/datasets/external_sources.py +1047 -0
  107. pinneapple-0.5.0/pinneapple_data/datasets/geometry.py +268 -0
  108. pinneapple-0.5.0/pinneapple_data/datasets/physics.py +377 -0
  109. pinneapple-0.5.0/pinneapple_data/datasets/real_world.py +1664 -0
  110. pinneapple-0.5.0/pinneapple_data/datasets/registry.py +64 -0
  111. pinneapple-0.5.0/pinneapple_data/datasets/timeseries.py +354 -0
  112. pinneapple-0.5.0/pinneapple_data/device.py +148 -0
  113. pinneapple-0.5.0/pinneapple_data/geometry_features.py +85 -0
  114. pinneapple-0.5.0/pinneapple_data/grf_sampler.py +176 -0
  115. pinneapple-0.5.0/pinneapple_data/noether_dataset.py +213 -0
  116. pinneapple-0.5.0/pinneapple_data/parameter_sampling.py +117 -0
  117. pinneapple-0.5.0/pinneapple_data/physical_sample.py +241 -0
  118. pinneapple-0.5.0/pinneapple_data/physics_case.py +404 -0
  119. pinneapple-0.5.0/pinneapple_data/prefetch_adaptive.py +281 -0
  120. pinneapple-0.5.0/pinneapple_data/serialization.py +277 -0
  121. pinneapple-0.5.0/pinneapple_data/splits.py +103 -0
  122. pinneapple-0.5.0/pinneapple_data/stl_import.py +92 -0
  123. pinneapple-0.5.0/pinneapple_data/synth/__init__.py +37 -0
  124. pinneapple-0.5.0/pinneapple_data/synth/base.py +66 -0
  125. pinneapple-0.5.0/pinneapple_data/synth/curvefit.py +153 -0
  126. pinneapple-0.5.0/pinneapple_data/synth/distributions.py +154 -0
  127. pinneapple-0.5.0/pinneapple_data/synth/geometry.py +221 -0
  128. pinneapple-0.5.0/pinneapple_data/synth/geometry_cadquery.py +532 -0
  129. pinneapple-0.5.0/pinneapple_data/synth/images.py +262 -0
  130. pinneapple-0.5.0/pinneapple_data/synth/operators/__init__.py +5 -0
  131. pinneapple-0.5.0/pinneapple_data/synth/operators/masks.py +38 -0
  132. pinneapple-0.5.0/pinneapple_data/synth/operators/noise.py +28 -0
  133. pinneapple-0.5.0/pinneapple_data/synth/operators/transforms.py +28 -0
  134. pinneapple-0.5.0/pinneapple_data/synth/pde.py +254 -0
  135. pinneapple-0.5.0/pinneapple_data/synth/pde_symbolic.py +498 -0
  136. pinneapple-0.5.0/pinneapple_data/synth/registry.py +73 -0
  137. pinneapple-0.5.0/pinneapple_data/synth/sample_adapter.py +192 -0
  138. pinneapple-0.5.0/pinneapple_data/transforms.py +139 -0
  139. pinneapple-0.5.0/pinneapple_data/upd_dataset.py +186 -0
  140. pinneapple-0.5.0/pinneapple_data/upd_types.py +102 -0
  141. pinneapple-0.5.0/pinneapple_data/validators.py +160 -0
  142. pinneapple-0.5.0/pinneapple_data/zarr_cached_store.py +230 -0
  143. pinneapple-0.5.0/pinneapple_data/zarr_cached_store_bytes.py +225 -0
  144. pinneapple-0.5.0/pinneapple_data/zarr_iterable.py +68 -0
  145. pinneapple-0.5.0/pinneapple_data/zarr_prefetch.py +204 -0
  146. pinneapple-0.5.0/pinneapple_data/zarr_shard_iterable.py +161 -0
  147. pinneapple-0.5.0/pinneapple_data/zarr_shards.py +153 -0
  148. pinneapple-0.5.0/pinneapple_data/zarr_store.py +399 -0
  149. pinneapple-0.5.0/pinneapple_design/__init__.py +178 -0
  150. pinneapple-0.5.0/pinneapple_design/design_optimizer/__init__.py +87 -0
  151. pinneapple-0.5.0/pinneapple_design/design_optimizer/adjoint.py +548 -0
  152. pinneapple-0.5.0/pinneapple_design/design_optimizer/constraints.py +253 -0
  153. pinneapple-0.5.0/pinneapple_design/design_optimizer/objective.py +137 -0
  154. pinneapple-0.5.0/pinneapple_design/design_optimizer/optimizer.py +625 -0
  155. pinneapple-0.5.0/pinneapple_design/design_optimizer/pareto.py +272 -0
  156. pinneapple-0.5.0/pinneapple_design/design_optimizer/pipeline.py +501 -0
  157. pinneapple-0.5.0/pinneapple_design/design_optimizer/refinement.py +224 -0
  158. pinneapple-0.5.0/pinneapple_design/design_optimizer/surrogate.py +267 -0
  159. pinneapple-0.5.0/pinneapple_design/geometry/__init__.py +227 -0
  160. pinneapple-0.5.0/pinneapple_design/geometry/builders/__init__.py +3 -0
  161. pinneapple-0.5.0/pinneapple_design/geometry/builders/stl_domain_batch_builder.py +451 -0
  162. pinneapple-0.5.0/pinneapple_design/geometry/core/__init__.py +11 -0
  163. pinneapple-0.5.0/pinneapple_design/geometry/core/geometry.py +422 -0
  164. pinneapple-0.5.0/pinneapple_design/geometry/core/mesh.py +566 -0
  165. pinneapple-0.5.0/pinneapple_design/geometry/core/registry.py +288 -0
  166. pinneapple-0.5.0/pinneapple_design/geometry/csg.py +569 -0
  167. pinneapple-0.5.0/pinneapple_design/geometry/gen/__init__.py +16 -0
  168. pinneapple-0.5.0/pinneapple_design/geometry/gen/airfoil.py +80 -0
  169. pinneapple-0.5.0/pinneapple_design/geometry/gen/cadquery_gen.py +404 -0
  170. pinneapple-0.5.0/pinneapple_design/geometry/gen/domains.py +753 -0
  171. pinneapple-0.5.0/pinneapple_design/geometry/gen/domains3d.py +596 -0
  172. pinneapple-0.5.0/pinneapple_design/geometry/gen/genetic_sdf.py +109 -0
  173. pinneapple-0.5.0/pinneapple_design/geometry/gen/primitives.py +752 -0
  174. pinneapple-0.5.0/pinneapple_design/geometry/gen/sdf_shapes.py +628 -0
  175. pinneapple-0.5.0/pinneapple_design/geometry/gen/threaded_connection.py +441 -0
  176. pinneapple-0.5.0/pinneapple_design/geometry/io/__init__.py +33 -0
  177. pinneapple-0.5.0/pinneapple_design/geometry/io/cadquery_bridge.py +38 -0
  178. pinneapple-0.5.0/pinneapple_design/geometry/io/iges.py +156 -0
  179. pinneapple-0.5.0/pinneapple_design/geometry/io/meshio_bridge.py +148 -0
  180. pinneapple-0.5.0/pinneapple_design/geometry/io/sdf_meshing.py +171 -0
  181. pinneapple-0.5.0/pinneapple_design/geometry/io/step.py +131 -0
  182. pinneapple-0.5.0/pinneapple_design/geometry/io/stl.py +26 -0
  183. pinneapple-0.5.0/pinneapple_design/geometry/io/trimesh_bridge.py +110 -0
  184. pinneapple-0.5.0/pinneapple_design/geometry/mesh/__init__.py +25 -0
  185. pinneapple-0.5.0/pinneapple_design/geometry/mesh/mesher_2d.py +435 -0
  186. pinneapple-0.5.0/pinneapple_design/geometry/mesh/mesher_3d.py +838 -0
  187. pinneapple-0.5.0/pinneapple_design/geometry/mesh_collocator.py +387 -0
  188. pinneapple-0.5.0/pinneapple_design/geometry/ops/__init__.py +52 -0
  189. pinneapple-0.5.0/pinneapple_design/geometry/ops/clean.py +601 -0
  190. pinneapple-0.5.0/pinneapple_design/geometry/ops/features.py +87 -0
  191. pinneapple-0.5.0/pinneapple_design/geometry/ops/lbm_bridge.py +248 -0
  192. pinneapple-0.5.0/pinneapple_design/geometry/ops/meshfree.py +396 -0
  193. pinneapple-0.5.0/pinneapple_design/geometry/ops/occ_features.py +205 -0
  194. pinneapple-0.5.0/pinneapple_design/geometry/ops/pointcloud.py +79 -0
  195. pinneapple-0.5.0/pinneapple_design/geometry/ops/remesh.py +57 -0
  196. pinneapple-0.5.0/pinneapple_design/geometry/ops/repair.py +60 -0
  197. pinneapple-0.5.0/pinneapple_design/geometry/ops/simplify.py +186 -0
  198. pinneapple-0.5.0/pinneapple_design/geometry/ops/voxelize.py +283 -0
  199. pinneapple-0.5.0/pinneapple_design/geometry/optimize/loop.py +123 -0
  200. pinneapple-0.5.0/pinneapple_design/geometry/sample/__init__.py +30 -0
  201. pinneapple-0.5.0/pinneapple_design/geometry/sample/barycentric.py +65 -0
  202. pinneapple-0.5.0/pinneapple_design/geometry/sample/grids.py +60 -0
  203. pinneapple-0.5.0/pinneapple_design/geometry/sample/marching_squares.py +87 -0
  204. pinneapple-0.5.0/pinneapple_design/geometry/sample/particles.py +50 -0
  205. pinneapple-0.5.0/pinneapple_design/geometry/sample/points.py +107 -0
  206. pinneapple-0.5.0/pinneapple_hub/__init__.py +11 -0
  207. pinneapple-0.5.0/pinneapple_hub/hub.py +150 -0
  208. pinneapple-0.5.0/pinneapple_hub/model_card.py +112 -0
  209. pinneapple-0.5.0/pinneapple_llm/__init__.py +54 -0
  210. pinneapple-0.5.0/pinneapple_llm/_dispatch.py +77 -0
  211. pinneapple-0.5.0/pinneapple_llm/agent_loop.py +330 -0
  212. pinneapple-0.5.0/pinneapple_llm/cad_draft.py +581 -0
  213. pinneapple-0.5.0/pinneapple_llm/catalog_match.py +127 -0
  214. pinneapple-0.5.0/pinneapple_llm/conversation_store.py +119 -0
  215. pinneapple-0.5.0/pinneapple_llm/draft.py +162 -0
  216. pinneapple-0.5.0/pinneapple_llm/finetune.py +115 -0
  217. pinneapple-0.5.0/pinneapple_llm/geometry_draft.py +120 -0
  218. pinneapple-0.5.0/pinneapple_llm/guardrail.py +1068 -0
  219. pinneapple-0.5.0/pinneapple_llm/local_llm.py +118 -0
  220. pinneapple-0.5.0/pinneapple_llm/org_knowledge.py +132 -0
  221. pinneapple-0.5.0/pinneapple_llm/research.py +84 -0
  222. pinneapple-0.5.0/pinneapple_llm/twin_draft.py +155 -0
  223. pinneapple-0.5.0/pinneapple_models/__init__.py +63 -0
  224. pinneapple-0.5.0/pinneapple_models/registry.py +9 -0
  225. pinneapple-0.5.0/pinneapple_neural/__init__.py +255 -0
  226. pinneapple-0.5.0/pinneapple_neural/architectures/__init__.py +42 -0
  227. pinneapple-0.5.0/pinneapple_neural/architectures/_registry_bridge.py +39 -0
  228. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/__init__.py +26 -0
  229. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/ae.py +27 -0
  230. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/base.py +62 -0
  231. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/conv.py +30 -0
  232. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/dynamics.py +31 -0
  233. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/gnn.py +38 -0
  234. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/operators.py +48 -0
  235. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/pinn.py +36 -0
  236. pinneapple-0.5.0/pinneapple_neural/architectures/adapters/ts.py +43 -0
  237. pinneapple-0.5.0/pinneapple_neural/architectures/afno.py +205 -0
  238. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/__init__.py +4 -0
  239. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/ae_2d.py +133 -0
  240. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/ae_rom_hybrid.py +320 -0
  241. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/base.py +50 -0
  242. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/dense_ae.py +53 -0
  243. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/kae.py +176 -0
  244. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/koopman_pi_ae.py +330 -0
  245. pinneapple-0.5.0/pinneapple_neural/architectures/autoencoders/registry.py +69 -0
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@@ -0,0 +1,32 @@
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+ # Byte-compiled
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+ __pycache__/
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+ *.DS_Store
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+ *.vscode
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+ .idea
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+
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+ # Python Environments
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+ .env
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+ .venv
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+ /env
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+
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+ # Others
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+ bench_out
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+
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+ .claude
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+ bin
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+ numpy
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+ numpy-2.4.3.dist-info
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+ numpy.libs
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+
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+ pinneapple_app/frontend
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+
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+ # Build/output cruft
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+ docs/api/
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+ dist/
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+ runs/
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+ run_results/
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+ examples/_out/
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+ examples/_runs*/
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+ examples/results_chassis/
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+ examples/use_cases/*/outputs/
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+ examples/geometry/outputs/
@@ -0,0 +1,168 @@
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