pifeat 0.1.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- pifeat-0.1.1/.github/workflows/ci.yml +57 -0
- pifeat-0.1.1/.github/workflows/release.yml +133 -0
- pifeat-0.1.1/.gitignore +11 -0
- pifeat-0.1.1/Cargo.lock +288 -0
- pifeat-0.1.1/Cargo.toml +25 -0
- pifeat-0.1.1/LICENSE +661 -0
- pifeat-0.1.1/PKG-INFO +319 -0
- pifeat-0.1.1/README.md +291 -0
- pifeat-0.1.1/benches/bench_python_vs_native.py +170 -0
- pifeat-0.1.1/pyproject.toml +40 -0
- pifeat-0.1.1/python/pifeat/__init__.py +52 -0
- pifeat-0.1.1/src/engine.rs +796 -0
- pifeat-0.1.1/src/lib.rs +644 -0
- pifeat-0.1.1/src/nonlinear.rs +209 -0
- pifeat-0.1.1/src/py_buffer.rs +161 -0
- pifeat-0.1.1/src/spectral.rs +539 -0
- pifeat-0.1.1/src/time_domain.rs +406 -0
- pifeat-0.1.1/tests/bench_native.rs +201 -0
- pifeat-0.1.1/tests/test_scientific_validation.py +239 -0
- pifeat-0.1.1/tests/test_stdlib_zero_dep.py +138 -0
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name: CI
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- main
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contents: read
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rust-tests:
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name: Rust Unit & Zero-Alloc Tests
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: dtolnay/rust-toolchain@stable
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- uses: Swatinem/rust-cache@v2
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- name: Run pure-Rust unit tests
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run: cargo test --no-default-features --lib
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- name: Run zero-allocation & latency verification
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run: cargo test --no-default-features --release --test bench_native -- --nocapture
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python-scientific-tests:
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name: Scientific Validation (${{ matrix.os }} / ${{ matrix.arch_label }})
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runs-on: ${{ matrix.os }}
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strategy:
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fail-fast: false
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matrix:
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include:
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- os: ubuntu-latest
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arch_label: x86_64
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- os: ubuntu-24.04-arm
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arch_label: aarch64-rpi4-rpi5
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- os: windows-latest
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arch_label: windows-x64
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with:
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python-version: "3.12"
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- uses: dtolnay/rust-toolchain@stable
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- uses: Swatinem/rust-cache@v2
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- name: Install maturin & scientific reference dependencies (pre-built wheels)
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run: |
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python -m pip install --upgrade pip
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pip install --only-binary=:all: maturin numpy scipy pytest
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- name: Build & install pifeat wheel
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run: |
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maturin build --release --out dist -i python
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pip install --no-index --find-links=dist pifeat
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- name: Run zero-dependency stdlib suite
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run: python tests/test_stdlib_zero_dep.py
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- name: Run full scientific reference suite (vs SciPy & NumPy)
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run: pytest -v
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name: Release
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on:
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push:
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tags:
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- "v*"
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workflow_dispatch:
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permissions:
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contents: read
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jobs:
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rust-tests:
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name: Rust Unit & Zero-Alloc Tests
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: dtolnay/rust-toolchain@stable
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- uses: Swatinem/rust-cache@v2
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- name: Run pure-Rust unit tests
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run: cargo test --no-default-features --lib
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- name: Run zero-allocation verification
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run: cargo test --no-default-features --release --test bench_native -- --nocapture
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linux:
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runs-on: ubuntu-latest
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strategy:
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fail-fast: false
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matrix:
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target: [x86_64, aarch64, armv7]
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with:
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python-version: "3.12"
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- name: Build wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.target }}
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args: --release --out dist --interpreter 3.10 3.11 3.12 3.13
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manylinux: auto
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- name: Test x86_64 wheel against SciPy & NumPy
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if: matrix.target == 'x86_64'
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run: |
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pip install --only-binary=:all: numpy scipy pytest
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pip install --no-index --find-links=dist pifeat
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python tests/test_stdlib_zero_dep.py
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pytest -v
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- name: Set up QEMU for Raspberry Pi (ARMv7 / AArch64) container test
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if: matrix.target != 'x86_64'
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uses: docker/setup-qemu-action@v3
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with:
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platforms: arm,arm64
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- name: Test ARMv7 wheel in 32-bit Raspberry Pi container (zero-dependency stdlib)
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if: matrix.target == 'armv7'
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run: |
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docker run --rm --platform linux/arm/v7 \
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-v "${{ github.workspace }}:/work" -w /work \
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arm32v7/python:3.12-slim-bookworm \
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sh -c "pip install --no-index --find-links=dist pifeat && python tests/test_stdlib_zero_dep.py"
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- name: Test AArch64 wheel in 64-bit Raspberry Pi container (zero-dependency stdlib)
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if: matrix.target == 'aarch64'
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run: |
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docker run --rm --platform linux/arm64 \
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-v "${{ github.workspace }}:/work" -w /work \
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arm64v8/python:3.12-slim-bookworm \
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sh -c "pip install --no-index --find-links=dist pifeat && python tests/test_stdlib_zero_dep.py"
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- uses: actions/upload-artifact@v4
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with:
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name: wheels-linux-${{ matrix.target }}
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path: dist
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windows:
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runs-on: windows-latest
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strategy:
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fail-fast: false
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matrix:
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target: [x64]
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with:
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python-version: "3.12"
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architecture: ${{ matrix.target }}
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- name: Build wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.target }}
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args: --release --out dist --interpreter 3.10 3.11 3.12 3.13
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- name: Test Windows x64 wheel against SciPy & NumPy
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run: |
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pip install --only-binary=:all: numpy scipy pytest
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pip install --no-index --find-links=dist pifeat
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python tests/test_stdlib_zero_dep.py
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pytest -v
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with:
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name: wheels-windows-${{ matrix.target }}
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path: dist
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sdist:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- name: Build sdist
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uses: PyO3/maturin-action@v1
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with:
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command: sdist
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args: --out dist
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- uses: actions/upload-artifact@v4
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with:
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name: Publish to PyPI
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runs-on: ubuntu-latest
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needs: [rust-tests, linux, windows, sdist]
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if: startsWith(github.ref, 'refs/tags/v')
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environment:
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name: pypi
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url: https://pypi.org/p/pifeat
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permissions:
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id-token: write # Trusted Publishing (OIDC)
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steps:
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- uses: actions/download-artifact@v4
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path: dist
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merge-multiple: true
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- name: Publish to PyPI
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uses: pypa/gh-action-pypi-publish@release/v1
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with:
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packages-dir: dist
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pifeat-0.1.1/.gitignore
ADDED
pifeat-0.1.1/Cargo.lock
ADDED
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# This file is automatically @generated by Cargo.
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# It is not intended for manual editing.
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version = 4
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[[package]]
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name = "autocfg"
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version = "1.5.1"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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checksum = "f2032f911046de80f0a198e0901378627c33f59ea0ac00e363d481118bd70a53"
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[[package]]
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name = "cc"
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version = "1.11.2"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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checksum = "33ef9e3e8154a45c7a95cff4c1299702106ad94062d7bb85fdc5d3a5afd91d45"
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dependencies = [
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"find-msvc-tools",
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"shlex",
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]
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[[package]]
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name = "cfg-if"
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version = "1.0.5"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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[[package]]
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name = "find-msvc-tools"
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version = "0.1.15"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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name = "heck"
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version = "0.5.0"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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[[package]]
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name = "indoc"
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version = "2.0.8"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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dependencies = [
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"rustversion",
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name = "libc"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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name = "memoffset"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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dependencies = [
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"autocfg",
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]
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name = "num-complex"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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dependencies = [
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]
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name = "num-integer"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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dependencies = [
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]
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name = "num-traits"
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version = "0.2.19"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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dependencies = [
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name = "once_cell"
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version = "1.21.4"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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name = "pifeat"
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version = "0.1.1"
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dependencies = [
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]
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|
+
|
|
104
|
+
[[package]]
|
|
105
|
+
name = "portable-atomic"
|
|
106
|
+
version = "1.15.0"
|
|
107
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
108
|
+
checksum = "05c8b63e8d9609db387f0324918f81d68fe27748f084ef092fb35954d0539a85"
|
|
109
|
+
|
|
110
|
+
[[package]]
|
|
111
|
+
name = "primal-check"
|
|
112
|
+
version = "0.3.4"
|
|
113
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
114
|
+
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|
|
115
|
+
dependencies = [
|
|
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|
+
"num-integer",
|
|
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|
+
]
|
|
118
|
+
|
|
119
|
+
[[package]]
|
|
120
|
+
name = "proc-macro2"
|
|
121
|
+
version = "1.0.107"
|
|
122
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
123
|
+
checksum = "985e7ec9bb745e6ce6535b544d84d6cd6f7ad8bd711c398938ae983b91a766d9"
|
|
124
|
+
dependencies = [
|
|
125
|
+
"unicode-ident",
|
|
126
|
+
]
|
|
127
|
+
|
|
128
|
+
[[package]]
|
|
129
|
+
name = "pyo3"
|
|
130
|
+
version = "0.22.6"
|
|
131
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
132
|
+
checksum = "f402062616ab18202ae8319da13fa4279883a2b8a9d9f83f20dbade813ce1884"
|
|
133
|
+
dependencies = [
|
|
134
|
+
"cfg-if",
|
|
135
|
+
"indoc",
|
|
136
|
+
"libc",
|
|
137
|
+
"memoffset",
|
|
138
|
+
"once_cell",
|
|
139
|
+
"portable-atomic",
|
|
140
|
+
"pyo3-build-config",
|
|
141
|
+
"pyo3-ffi",
|
|
142
|
+
"pyo3-macros",
|
|
143
|
+
"unindent",
|
|
144
|
+
]
|
|
145
|
+
|
|
146
|
+
[[package]]
|
|
147
|
+
name = "pyo3-build-config"
|
|
148
|
+
version = "0.22.6"
|
|
149
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
150
|
+
checksum = "b14b5775b5ff446dd1056212d778012cbe8a0fbffd368029fd9e25b514479c38"
|
|
151
|
+
dependencies = [
|
|
152
|
+
"once_cell",
|
|
153
|
+
"python3-dll-a",
|
|
154
|
+
"target-lexicon",
|
|
155
|
+
]
|
|
156
|
+
|
|
157
|
+
[[package]]
|
|
158
|
+
name = "pyo3-ffi"
|
|
159
|
+
version = "0.22.6"
|
|
160
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
161
|
+
checksum = "9ab5bcf04a2cdcbb50c7d6105de943f543f9ed92af55818fd17b660390fc8636"
|
|
162
|
+
dependencies = [
|
|
163
|
+
"libc",
|
|
164
|
+
"pyo3-build-config",
|
|
165
|
+
]
|
|
166
|
+
|
|
167
|
+
[[package]]
|
|
168
|
+
name = "pyo3-macros"
|
|
169
|
+
version = "0.22.6"
|
|
170
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
171
|
+
checksum = "0fd24d897903a9e6d80b968368a34e1525aeb719d568dba8b3d4bfa5dc67d453"
|
|
172
|
+
dependencies = [
|
|
173
|
+
"proc-macro2",
|
|
174
|
+
"pyo3-macros-backend",
|
|
175
|
+
"quote",
|
|
176
|
+
"syn",
|
|
177
|
+
]
|
|
178
|
+
|
|
179
|
+
[[package]]
|
|
180
|
+
name = "pyo3-macros-backend"
|
|
181
|
+
version = "0.22.6"
|
|
182
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
183
|
+
checksum = "36c011a03ba1e50152b4b394b479826cad97e7a21eb52df179cd91ac411cbfbe"
|
|
184
|
+
dependencies = [
|
|
185
|
+
"heck",
|
|
186
|
+
"proc-macro2",
|
|
187
|
+
"pyo3-build-config",
|
|
188
|
+
"quote",
|
|
189
|
+
"syn",
|
|
190
|
+
]
|
|
191
|
+
|
|
192
|
+
[[package]]
|
|
193
|
+
name = "python3-dll-a"
|
|
194
|
+
version = "0.2.15"
|
|
195
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
196
|
+
checksum = "d80ba7540edb18890d444c5aa8e1f1f99b1bdf26fb26ae383135325f4a36042b"
|
|
197
|
+
dependencies = [
|
|
198
|
+
"cc",
|
|
199
|
+
]
|
|
200
|
+
|
|
201
|
+
[[package]]
|
|
202
|
+
name = "quote"
|
|
203
|
+
version = "1.0.47"
|
|
204
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
205
|
+
checksum = "1fbf4db142a473a8d80c26bbf18454ed458bf8d26c8219c331daecfdbd079001"
|
|
206
|
+
dependencies = [
|
|
207
|
+
"proc-macro2",
|
|
208
|
+
]
|
|
209
|
+
|
|
210
|
+
[[package]]
|
|
211
|
+
name = "realfft"
|
|
212
|
+
version = "3.5.1"
|
|
213
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
214
|
+
checksum = "538895ccf2006b473aafbe8d72770e21038961ab67aae34f3c577485fc703a7d"
|
|
215
|
+
dependencies = [
|
|
216
|
+
"rustfft",
|
|
217
|
+
]
|
|
218
|
+
|
|
219
|
+
[[package]]
|
|
220
|
+
name = "rustfft"
|
|
221
|
+
version = "6.4.1"
|
|
222
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
223
|
+
checksum = "21db5f9893e91f41798c88680037dba611ca6674703c1a18601b01a72c8adb89"
|
|
224
|
+
dependencies = [
|
|
225
|
+
"num-complex",
|
|
226
|
+
"num-integer",
|
|
227
|
+
"num-traits",
|
|
228
|
+
"primal-check",
|
|
229
|
+
"strength_reduce",
|
|
230
|
+
"transpose",
|
|
231
|
+
]
|
|
232
|
+
|
|
233
|
+
[[package]]
|
|
234
|
+
name = "rustversion"
|
|
235
|
+
version = "1.0.23"
|
|
236
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
237
|
+
checksum = "cf54715a573b99ac80df0bc206da022bcd442c974952c7b9720069370852e21f"
|
|
238
|
+
|
|
239
|
+
[[package]]
|
|
240
|
+
name = "shlex"
|
|
241
|
+
version = "2.0.1"
|
|
242
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
243
|
+
checksum = "f8fadd59c855ef2080decdef8ff161eb6661b86933c9d82e5ba29dc602a55aba"
|
|
244
|
+
|
|
245
|
+
[[package]]
|
|
246
|
+
name = "strength_reduce"
|
|
247
|
+
version = "0.2.4"
|
|
248
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
249
|
+
checksum = "fe895eb47f22e2ddd4dabc02bce419d2e643c8e3b585c78158b349195bc24d82"
|
|
250
|
+
|
|
251
|
+
[[package]]
|
|
252
|
+
name = "syn"
|
|
253
|
+
version = "2.0.119"
|
|
254
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
255
|
+
checksum = "872831b642d1a07999a962a351ed35b955ea2cfc8f3862091e2a240a84f17297"
|
|
256
|
+
dependencies = [
|
|
257
|
+
"proc-macro2",
|
|
258
|
+
"quote",
|
|
259
|
+
"unicode-ident",
|
|
260
|
+
]
|
|
261
|
+
|
|
262
|
+
[[package]]
|
|
263
|
+
name = "target-lexicon"
|
|
264
|
+
version = "0.12.16"
|
|
265
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
266
|
+
checksum = "61c41af27dd6d1e27b1b16b489db798443478cef1f06a660c96db617ba5de3b1"
|
|
267
|
+
|
|
268
|
+
[[package]]
|
|
269
|
+
name = "transpose"
|
|
270
|
+
version = "0.2.3"
|
|
271
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
272
|
+
checksum = "1ad61aed86bc3faea4300c7aee358b4c6d0c8d6ccc36524c96e4c92ccf26e77e"
|
|
273
|
+
dependencies = [
|
|
274
|
+
"num-integer",
|
|
275
|
+
"strength_reduce",
|
|
276
|
+
]
|
|
277
|
+
|
|
278
|
+
[[package]]
|
|
279
|
+
name = "unicode-ident"
|
|
280
|
+
version = "1.0.27"
|
|
281
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
282
|
+
checksum = "a2c754d6c33795a1c324727428e5a7dedb5b06195f9890bdbcba760d3e246563"
|
|
283
|
+
|
|
284
|
+
[[package]]
|
|
285
|
+
name = "unindent"
|
|
286
|
+
version = "0.2.4"
|
|
287
|
+
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
288
|
+
checksum = "7264e107f553ccae879d21fbea1d6724ac785e8c3bfc762137959b5802826ef3"
|
pifeat-0.1.1/Cargo.toml
ADDED
|
@@ -0,0 +1,25 @@
|
|
|
1
|
+
[package]
|
|
2
|
+
name = "pifeat"
|
|
3
|
+
version = "0.1.1"
|
|
4
|
+
edition = "2021"
|
|
5
|
+
description = "Zero-dependency, high-performance EEG and biosignal feature extraction engine in Rust with Python bindings"
|
|
6
|
+
license = "AGPL-3.0-or-later"
|
|
7
|
+
readme = "README.md"
|
|
8
|
+
|
|
9
|
+
[lib]
|
|
10
|
+
name = "pifeat"
|
|
11
|
+
crate-type = ["cdylib", "rlib"]
|
|
12
|
+
|
|
13
|
+
[dependencies]
|
|
14
|
+
pyo3 = { version = "0.22", features = ["extension-module", "generate-import-lib"], optional = true }
|
|
15
|
+
realfft = "3.4"
|
|
16
|
+
|
|
17
|
+
[features]
|
|
18
|
+
default = ["python"]
|
|
19
|
+
python = ["dep:pyo3"]
|
|
20
|
+
|
|
21
|
+
[profile.release]
|
|
22
|
+
opt-level = 3
|
|
23
|
+
lto = "fat"
|
|
24
|
+
codegen-units = 1
|
|
25
|
+
strip = true
|